| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is pstS [H]
Identifier: 117921318
GI number: 117921318
Start: 3441048
End: 3442019
Strand: Reverse
Name: pstS [H]
Synonym: Shewana3_2877
Alternate gene names: 117921318
Gene position: 3442019-3441048 (Counterclockwise)
Preceding gene: 117921319
Following gene: 117921317
Centisome position: 69.23
GC content: 44.75
Gene sequence:
>972_bases ATGAAACTGAAAAAGCTTGTCGGCGCGATGACCCTCACAGCCGCTGGTGTATTCTCTGCCACTGCAATGGCATCTGTTGA TCAATCTCTGCCAACTTACGAGAAAGCAAGTGGTGTATCAGGCAACCTTTCGTCTGTAGGTTCAGATACTTTAGCCAACA TGATGACTCTGTGGGCTGAAGAATTTAAACAGATGTACCCTAACGTAAACATCCAAATTCAAGCTGCGGGCTCTTCTACT GCGCCACCAGCATTAACTGAAGGTACTTCACAATTCGGTCCAATGAGCCGCAAAATGAAGCCTAACGAAGAAGAAGCCTT CGAAAAACACTATGGTTACAAGCCAACTGCAGTTCGTGTTGCGATTGACGCTTTAGCGGTATTCGTACACAAAGATAACC CAATCAAAGGCTTAACTGTTGAACAAGTTGACGGTATTTTCTCTTCTACTCACAAGTGTGGTAGCAGCGATATCCAACGT TGGGGCGACTTAGGTCTTGACGGTAACTGGTCAGCAAAAGACGTACAATTGTACGGTCGTAACTCAGTATCAGGCACTTA CGGTTACTTCAAAGAGCACGCTCTGTGTAAAGGTGACTTCAAGGCCAACGTAAACGAGCAACCAGGTTCTGCTTCTGTGG TTCAGTCAGTGTCTCAATCACTGAACGCTATCGGTTACTCAGGTATCGGTTATAAAACTGCTGGCGTGAAAGCTGTTGCC ATCGCGAAGAAAGGTAACGAGTTTATCGAAGCGACTGCAGAAAACGCAGCGAATGGTACTTACCCATTATCACGTTACTT ATATGTATACGTGAACAAGCAACCAAACAAAGACTTAGCACCAATGGAAAAAGAATTCATCCGTTACGTGCTGTCTAAGC AAGGTCAGCAAGTGGTAGAAAAAGACGGTTATGTGACTCTACCTAAGAGCGTAGTTGCTAAAGATTTAGAACAGTTAGGT ATCCGCCTCTAA
Upstream 100 bases:
>100_bases GTCACATCTTGGACATAGGATTGTCATTGTAGCGATTGATACTGGCTGCGTCTGAAGAAACTTAAGTTAGAAATTAGTTA GCTTATTACTGGAGCACATA
Downstream 100 bases:
>100_bases TTCTTAATCGCTAAACCTTAAGGGTCTCTTCGGAGGCCCTTTTTGTTTTTGGGCCCTAAATCACGAACTTGAGTAGGGGG TTATCATTTTGGGGTGATTG
Product: phosphate binding protein
Products: NA
Alternate protein names: PBP [H]
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MKLKKLVGAMTLTAAGVFSATAMASVDQSLPTYEKASGVSGNLSSVGSDTLANMMTLWAEEFKQMYPNVNIQIQAAGSST APPALTEGTSQFGPMSRKMKPNEEEAFEKHYGYKPTAVRVAIDALAVFVHKDNPIKGLTVEQVDGIFSSTHKCGSSDIQR WGDLGLDGNWSAKDVQLYGRNSVSGTYGYFKEHALCKGDFKANVNEQPGSASVVQSVSQSLNAIGYSGIGYKTAGVKAVA IAKKGNEFIEATAENAANGTYPLSRYLYVYVNKQPNKDLAPMEKEFIRYVLSKQGQQVVEKDGYVTLPKSVVAKDLEQLG IRL
Sequences:
>Translated_323_residues MKLKKLVGAMTLTAAGVFSATAMASVDQSLPTYEKASGVSGNLSSVGSDTLANMMTLWAEEFKQMYPNVNIQIQAAGSST APPALTEGTSQFGPMSRKMKPNEEEAFEKHYGYKPTAVRVAIDALAVFVHKDNPIKGLTVEQVDGIFSSTHKCGSSDIQR WGDLGLDGNWSAKDVQLYGRNSVSGTYGYFKEHALCKGDFKANVNEQPGSASVVQSVSQSLNAIGYSGIGYKTAGVKAVA IAKKGNEFIEATAENAANGTYPLSRYLYVYVNKQPNKDLAPMEKEFIRYVLSKQGQQVVEKDGYVTLPKSVVAKDLEQLG IRL >Mature_323_residues MKLKKLVGAMTLTAAGVFSATAMASVDQSLPTYEKASGVSGNLSSVGSDTLANMMTLWAEEFKQMYPNVNIQIQAAGSST APPALTEGTSQFGPMSRKMKPNEEEAFEKHYGYKPTAVRVAIDALAVFVHKDNPIKGLTVEQVDGIFSSTHKCGSSDIQR WGDLGLDGNWSAKDVQLYGRNSVSGTYGYFKEHALCKGDFKANVNEQPGSASVVQSVSQSLNAIGYSGIGYKTAGVKAVA IAKKGNEFIEATAENAANGTYPLSRYLYVYVNKQPNKDLAPMEKEFIRYVLSKQGQQVVEKDGYVTLPKSVVAKDLEQLG IRL
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34838; Mature: 34838
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKKLVGAMTLTAAGVFSATAMASVDQSLPTYEKASGVSGNLSSVGSDTLANMMTLWAE CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHCCHHHHHHHHHHHHH EFKQMYPNVNIQIQAAGSSTAPPALTEGTSQFGPMSRKMKPNEEEAFEKHYGYKPTAVRV HHHHHCCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHH AIDALAVFVHKDNPIKGLTVEQVDGIFSSTHKCGSSDIQRWGDLGLDGNWSAKDVQLYGR HHHHHEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEEEEECC NSVSGTYGYFKEHALCKGDFKANVNEQPGSASVVQSVSQSLNAIGYSGIGYKTAGVKAVA CCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCEEEEE IAKKGNEFIEATAENAANGTYPLSRYLYVYVNKQPNKDLAPMEKEFIRYVLSKQGQQVVE EECCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHH KDGYVTLPKSVVAKDLEQLGIRL CCCCEECCHHHHHHHHHHHCCCC >Mature Secondary Structure MKLKKLVGAMTLTAAGVFSATAMASVDQSLPTYEKASGVSGNLSSVGSDTLANMMTLWAE CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHCCHHHHHHHHHHHHH EFKQMYPNVNIQIQAAGSSTAPPALTEGTSQFGPMSRKMKPNEEEAFEKHYGYKPTAVRV HHHHHCCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHH AIDALAVFVHKDNPIKGLTVEQVDGIFSSTHKCGSSDIQRWGDLGLDGNWSAKDVQLYGR HHHHHEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEEEEECC NSVSGTYGYFKEHALCKGDFKANVNEQPGSASVVQSVSQSLNAIGYSGIGYKTAGVKAVA CCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCEEEEE IAKKGNEFIEATAENAANGTYPLSRYLYVYVNKQPNKDLAPMEKEFIRYVLSKQGQQVVE EECCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHH KDGYVTLPKSVVAKDLEQLGIRL CCCCEECCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA