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The map label for this gene is rpfG [H]

Identifier: 117921261

GI number: 117921261

Start: 3367813

End: 3369741

Strand: Reverse

Name: rpfG [H]

Synonym: Shewana3_2820

Alternate gene names: 117921261

Gene position: 3369741-3367813 (Counterclockwise)

Preceding gene: 117921262

Following gene: 117921256

Centisome position: 67.77

GC content: 48.11

Gene sequence:

>1929_bases
ATGTCTATGAGCCGTAGTCTCATTATTGGAATTAAAGACCTGCCTGAGGATTTACCTCTTTCTTGGGCCCGGCTTGACCG
GCAGTTTCGAGTGCAGTGCATGAGCCGGGCATTTTACGAAAGGTGCCAACGTTCGGCTGCGCAAATCATCAATCAACCCA
TCTGCCAGTTATTCGATGAATTTAATGCCAAACTTTGCGGCGATATTCTTCAACGTACCGATAACTACATCGGGTTGGTG
CTGAGGGATAATCAGGGCAGGCGAGTGCATTTTGCCCTATATGTTATTCCTGAGCAGGGGTGGCAACTTATCCTTGCCGA
TATTAACTATGAAGAATTGCCGATTAAGGGCCTGCATTCCGATTATCGCCGGGCTATCCAAGCGAGTGATGCCTGGTTAC
AACATATTGACGATGTGATCCAATCGCCGCAGGAAGAGGTGTTTAAAGTGGCGGTCGCCAAGGCGATTGCGTTGATGGAC
AGTCAGTATGGTTTTATCCTGCTGCATAATGATAAATCCAAGTCCCTCACCTTAGCAGCCCGTTCGGACTATCCTACGCC
TAAGGTTAACCAAGCCGAGTTTGTGGAGGAAAACACCCAAGCCTCTGAGCTTGAAAGTCAGCTCTGGCAAGAATGCGTTA
AAGACTACAAACCCATTATTCAGAATAAGTTAGAGAGCAATCGCTCCGATAATCTCCTGTTTGACCGCTTACTGCTGGGC
GAGCGCTATCTCGCTGTGCCTATGATTTTCCATAATCGCTTAGTGGGGATGGTGTGTGTGGTGGGGCGCGATGAGCCCTA
TAGCCGTAACGATGCTCGCTCCTTACTGACCTTTGCCAGTATTTTGTGGCACTCGATTGAACTTCCACGAAGTTTAAGGG
CGGTGTCTCGCCAGTCCAAAATCATCAAGGCGCAAAAAGAGCAGTTATCCCAATCCTTAACTCAGCTTATCAGCGCGATT
TCTGAGGCGTTAGAACTTAAGGATGCCTATACAGCAGGGCACCAAAAGTCGGTGGCACAATTAAGCTACCTGATTGGTGA
GAAACTCGGACTTGAGCCGCAGCGTTTAGAGGGGCTAAAAATCGGCGCACTGGTGCATGATATTGGTAAACTGGCGATAC
CATCACAGATTTTGACTAAGCCTTCAAAACTATCCAAAGAAGAGTACGCATTAATCCAAACCCATCCGTTGCATGGGGCA
GAGATTGTTGAGGATGTCGAGTTCCCATGGCCGATTAAACAGATGATTTTGCAGCATCATGAGCGACTCGATGGCTCGGG
TTATCCCTTAGGTTTGAAGGATAAAGCGATTCTTTATGAGGCTAAGATCATTGCCGTTGCCGATGTGGCCGACTCAATCC
TATCTCACCGTCCTTATCGTCCCTCCTTGGGACTCGCTAAAATGACCGAGGTCTTAAAGGCGGGAAGAGGCACTTTATTC
GACTCTGAAATCGTCGATACTTGCCTCGAGATTTTAATCAATCGTGAACTGAGTATTAGTGACCATATTGGTTCAGCGGT
ATTGGATCCTGTGGTGTCTGTGACCCTAGATCATGAACTTGCCGATATAAAACGCTTATTAACCGCGGCCCATGCCAAAG
TGGCCGTGGTGCTCGATGAGCATCATAAGATCATCGGGGTGATCACTCAGCGTTTACTCGATTATTGGCTTAGCCCTCTG
ATTGGTACGGCGGCGGAGCGGGATCACGACAGGGCATTCCTGCGTAAAAAAGCCCATCAAATTATGGAGCACTCGGTGCC
TTTGATTAGCGATGTCGCCACTTCAGAAGATGCATTGCAGCTGCTGAATCAAATGGATACTGAGTTTTTGGTCGTGGTGA
ATAAAGCGCAGCATGCGATAGGGATTATTGGCTGGCGAACCATTGCTATGGCCAACAAGGAGCGCCAAGAGGTTGAGCGT
TTAATTTAA

Upstream 100 bases:

>100_bases
CAGTATGTTTAATTGCGATATTTAAGGCATGATCATCTAGTCACATGACACTTTGAATTGTATGCCATTCAAAGTGTATT
ACTCATGGAAGGGGTGTTTG

Downstream 100 bases:

>100_bases
CATGCTTAATCTTAAGTACTTATGGTAATAAAAAGGCGTCAGTTAGACGCCCTAATATTGGCAATCGTATTGAGTTAAAA
ATTAACGGCATAAACCTCAT

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 642; Mature: 641

Protein sequence:

>642_residues
MSMSRSLIIGIKDLPEDLPLSWARLDRQFRVQCMSRAFYERCQRSAAQIINQPICQLFDEFNAKLCGDILQRTDNYIGLV
LRDNQGRRVHFALYVIPEQGWQLILADINYEELPIKGLHSDYRRAIQASDAWLQHIDDVIQSPQEEVFKVAVAKAIALMD
SQYGFILLHNDKSKSLTLAARSDYPTPKVNQAEFVEENTQASELESQLWQECVKDYKPIIQNKLESNRSDNLLFDRLLLG
ERYLAVPMIFHNRLVGMVCVVGRDEPYSRNDARSLLTFASILWHSIELPRSLRAVSRQSKIIKAQKEQLSQSLTQLISAI
SEALELKDAYTAGHQKSVAQLSYLIGEKLGLEPQRLEGLKIGALVHDIGKLAIPSQILTKPSKLSKEEYALIQTHPLHGA
EIVEDVEFPWPIKQMILQHHERLDGSGYPLGLKDKAILYEAKIIAVADVADSILSHRPYRPSLGLAKMTEVLKAGRGTLF
DSEIVDTCLEILINRELSISDHIGSAVLDPVVSVTLDHELADIKRLLTAAHAKVAVVLDEHHKIIGVITQRLLDYWLSPL
IGTAAERDHDRAFLRKKAHQIMEHSVPLISDVATSEDALQLLNQMDTEFLVVVNKAQHAIGIIGWRTIAMANKERQEVER
LI

Sequences:

>Translated_642_residues
MSMSRSLIIGIKDLPEDLPLSWARLDRQFRVQCMSRAFYERCQRSAAQIINQPICQLFDEFNAKLCGDILQRTDNYIGLV
LRDNQGRRVHFALYVIPEQGWQLILADINYEELPIKGLHSDYRRAIQASDAWLQHIDDVIQSPQEEVFKVAVAKAIALMD
SQYGFILLHNDKSKSLTLAARSDYPTPKVNQAEFVEENTQASELESQLWQECVKDYKPIIQNKLESNRSDNLLFDRLLLG
ERYLAVPMIFHNRLVGMVCVVGRDEPYSRNDARSLLTFASILWHSIELPRSLRAVSRQSKIIKAQKEQLSQSLTQLISAI
SEALELKDAYTAGHQKSVAQLSYLIGEKLGLEPQRLEGLKIGALVHDIGKLAIPSQILTKPSKLSKEEYALIQTHPLHGA
EIVEDVEFPWPIKQMILQHHERLDGSGYPLGLKDKAILYEAKIIAVADVADSILSHRPYRPSLGLAKMTEVLKAGRGTLF
DSEIVDTCLEILINRELSISDHIGSAVLDPVVSVTLDHELADIKRLLTAAHAKVAVVLDEHHKIIGVITQRLLDYWLSPL
IGTAAERDHDRAFLRKKAHQIMEHSVPLISDVATSEDALQLLNQMDTEFLVVVNKAQHAIGIIGWRTIAMANKERQEVER
LI
>Mature_641_residues
SMSRSLIIGIKDLPEDLPLSWARLDRQFRVQCMSRAFYERCQRSAAQIINQPICQLFDEFNAKLCGDILQRTDNYIGLVL
RDNQGRRVHFALYVIPEQGWQLILADINYEELPIKGLHSDYRRAIQASDAWLQHIDDVIQSPQEEVFKVAVAKAIALMDS
QYGFILLHNDKSKSLTLAARSDYPTPKVNQAEFVEENTQASELESQLWQECVKDYKPIIQNKLESNRSDNLLFDRLLLGE
RYLAVPMIFHNRLVGMVCVVGRDEPYSRNDARSLLTFASILWHSIELPRSLRAVSRQSKIIKAQKEQLSQSLTQLISAIS
EALELKDAYTAGHQKSVAQLSYLIGEKLGLEPQRLEGLKIGALVHDIGKLAIPSQILTKPSKLSKEEYALIQTHPLHGAE
IVEDVEFPWPIKQMILQHHERLDGSGYPLGLKDKAILYEAKIIAVADVADSILSHRPYRPSLGLAKMTEVLKAGRGTLFD
SEIVDTCLEILINRELSISDHIGSAVLDPVVSVTLDHELADIKRLLTAAHAKVAVVLDEHHKIIGVITQRLLDYWLSPLI
GTAAERDHDRAFLRKKAHQIMEHSVPLISDVATSEDALQLLNQMDTEFLVVVNKAQHAIGIIGWRTIAMANKERQEVERL
I

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 72547; Mature: 72415

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMSRSLIIGIKDLPEDLPLSWARLDRQFRVQCMSRAFYERCQRSAAQIINQPICQLFDE
CCCCCCEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNAKLCGDILQRTDNYIGLVLRDNQGRRVHFALYVIPEQGWQLILADINYEELPIKGLHS
HCHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCHH
DYRRAIQASDAWLQHIDDVIQSPQEEVFKVAVAKAIALMDSQYGFILLHNDKSKSLTLAA
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEE
RSDYPTPKVNQAEFVEENTQASELESQLWQECVKDYKPIIQNKLESNRSDNLLFDRLLLG
CCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
ERYLAVPMIFHNRLVGMVCVVGRDEPYSRNDARSLLTFASILWHSIELPRSLRAVSRQSK
CHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
IIKAQKEQLSQSLTQLISAISEALELKDAYTAGHQKSVAQLSYLIGEKLGLEPQRLEGLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCCH
IGALVHDIGKLAIPSQILTKPSKLSKEEYALIQTHPLHGAEIVEDVEFPWPIKQMILQHH
HHHHHHHHHHHCCCHHHHCCCHHCCHHHEEEEEECCCCCHHHHHHCCCCCCHHHHHHHHH
ERLDGSGYPLGLKDKAILYEAKIIAVADVADSILSHRPYRPSLGLAKMTEVLKAGRGTLF
HHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCC
DSEIVDTCLEILINRELSISDHIGSAVLDPVVSVTLDHELADIKRLLTAAHAKVAVVLDE
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
HHKIIGVITQRLLDYWLSPLIGTAAERDHDRAFLRKKAHQIMEHSVPLISDVATSEDALQ
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHH
LLNQMDTEFLVVVNKAQHAIGIIGWRTIAMANKERQEVERLI
HHHHCCCEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure 
SMSRSLIIGIKDLPEDLPLSWARLDRQFRVQCMSRAFYERCQRSAAQIINQPICQLFDE
CCCCCEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNAKLCGDILQRTDNYIGLVLRDNQGRRVHFALYVIPEQGWQLILADINYEELPIKGLHS
HCHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCHH
DYRRAIQASDAWLQHIDDVIQSPQEEVFKVAVAKAIALMDSQYGFILLHNDKSKSLTLAA
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEE
RSDYPTPKVNQAEFVEENTQASELESQLWQECVKDYKPIIQNKLESNRSDNLLFDRLLLG
CCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
ERYLAVPMIFHNRLVGMVCVVGRDEPYSRNDARSLLTFASILWHSIELPRSLRAVSRQSK
CHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
IIKAQKEQLSQSLTQLISAISEALELKDAYTAGHQKSVAQLSYLIGEKLGLEPQRLEGLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCCH
IGALVHDIGKLAIPSQILTKPSKLSKEEYALIQTHPLHGAEIVEDVEFPWPIKQMILQHH
HHHHHHHHHHHCCCHHHHCCCHHCCHHHEEEEEECCCCCHHHHHHCCCCCCHHHHHHHHH
ERLDGSGYPLGLKDKAILYEAKIIAVADVADSILSHRPYRPSLGLAKMTEVLKAGRGTLF
HHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCC
DSEIVDTCLEILINRELSISDHIGSAVLDPVVSVTLDHELADIKRLLTAAHAKVAVVLDE
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
HHKIIGVITQRLLDYWLSPLIGTAAERDHDRAFLRKKAHQIMEHSVPLISDVATSEDALQ
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHH
LLNQMDTEFLVVVNKAQHAIGIIGWRTIAMANKERQEVERLI
HHHHCCCEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]