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The map label for this gene is yaeL [C]

Identifier: 117921249

GI number: 117921249

Start: 3355023

End: 3356393

Strand: Reverse

Name: yaeL [C]

Synonym: Shewana3_2808

Alternate gene names: 117921249

Gene position: 3356393-3355023 (Counterclockwise)

Preceding gene: 117921250

Following gene: 117921248

Centisome position: 67.5

GC content: 49.67

Gene sequence:

>1371_bases
ATGTTAGATTTTTTGTGGAACTTAGGTTCGTTTATCGTTGCGCTTGGGCTGCTTATCACCGCCCACGAATACGGCCATTT
CTATGTTGCACGCCGCTGTGGCGTGAAGGTTGAACGTTTCTCTATTGGTTTTGGTAAGGCGATTTGGCGCAAAGTGGGTC
AAGATGGCACTGAATACGTCATCGCCATGATCCCGTTAGGCGGCTATGTCAAAATGCTCGATGAGCGAGTAGAAGACGTA
CCCGATGAGTTAAAGGACCAAGCCTTTAACCGTAAAACGGTATGGCAACGGATTGCGATTGTGGCCGCAGGGCCGATTGC
AAACTTTATCTTTGCGATTATCGCGCTGTATTTTATGTACTTAATTGGCGTGCCATCGCTTAAGCCTGTGATTACCTCAA
CCACACCTGGCACGGCAGCGGCGCAAATCCAAGTGAGTGAGCCGATGCAAGTGACGGCGATTTCAGGCCAGCCAGTACGC
AATTGGGAAGAAGTGAATTTAGCGCTTGTGGGCCATATAGGCGATGACAGCTTAACCGTCTCCCTCGCGCCGCTAAATGG
CTTGCAGGGTTTAGACACTACGGCTCGCACCTACACCCTTGATACCCGTGAGTGGCGTTTCGACCCAGAAAAAGAGTCGC
CGATTACGGCGCTGGGGCTGGGCGTGTATCGCCCTGCGATTGAGCCACAAATTGCGCTCATCAGCGAAGGCAGTGCGGCG
GCTAAGAGTGACCTGAAAGTCGGTGATACCTTGGTTGCCATCAATGGCCAAAATTACACCGATTGGCAAGCTTTTGTTGA
CATTATTCAACATTCTGCCAATGTGCCAGTGGAGTTAACTGTACGCCGTAATGGCGAGCAGTTTGCCATCTCAGTGACAC
CTGCGAGTGTTAAAAATAGTGATGGTAAAGAGGTAGGCGTGCTTGGGGTGAGCCCCGCTCAGGCACAGTGGCCTGAGAAT
ATGCGCCTGCAACTTGAATATGGCCCAATCGAATCTTTTGCTATCGCAGCCGATAAAACATGGCAACTTGTTGCTGTGAG
CTTTAAGATGATTGGCAAATTATTTACTGGCGATGTGTCAGTGAAAAACTTAAGTGGACCTATCTCAATCGCACAGGGTG
CGGGCAATAGTGCAAACTATGGCTTGGTTTACTTTCTCGGTTTCCTCGCGCTTATCAGTGTCAATTTAGGCATCATTAAC
CTGCTGCCATTGCCTGTGCTCGATGGGGGACACCTGCTGTATTACTTCGTTGAGGTAATCACTGGTAAACCTGTGTCTGA
AAAGGTACAGGAAATAGGATTCAGATTTGGGGCAGCATTGCTGCTGATGTTGATGAGCATCGCGCTCTTCAATGACTTTG
CCCGACTCTGA

Upstream 100 bases:

>100_bases
TGCACAAACGCGGATTTATGCCCGCGAACAGTTAGCGAAATTTGCTTAATCCCTCATTGGGTTAGGGATAAGCGGATTTG
ACGATGACATAAGGAGTGGA

Downstream 100 bases:

>100_bases
GCAAGGACAGACTAATAATTAGAAGTGCTCTATGAGATTGAATAAACTTTTTGCCTCGATGTTATTCGTCGGTGCGTCGT
TTTCAGGGACTGTGTTGGCG

Product: peptidase RseP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MLDFLWNLGSFIVALGLLITAHEYGHFYVARRCGVKVERFSIGFGKAIWRKVGQDGTEYVIAMIPLGGYVKMLDERVEDV
PDELKDQAFNRKTVWQRIAIVAAGPIANFIFAIIALYFMYLIGVPSLKPVITSTTPGTAAAQIQVSEPMQVTAISGQPVR
NWEEVNLALVGHIGDDSLTVSLAPLNGLQGLDTTARTYTLDTREWRFDPEKESPITALGLGVYRPAIEPQIALISEGSAA
AKSDLKVGDTLVAINGQNYTDWQAFVDIIQHSANVPVELTVRRNGEQFAISVTPASVKNSDGKEVGVLGVSPAQAQWPEN
MRLQLEYGPIESFAIAADKTWQLVAVSFKMIGKLFTGDVSVKNLSGPISIAQGAGNSANYGLVYFLGFLALISVNLGIIN
LLPLPVLDGGHLLYYFVEVITGKPVSEKVQEIGFRFGAALLLMLMSIALFNDFARL

Sequences:

>Translated_456_residues
MLDFLWNLGSFIVALGLLITAHEYGHFYVARRCGVKVERFSIGFGKAIWRKVGQDGTEYVIAMIPLGGYVKMLDERVEDV
PDELKDQAFNRKTVWQRIAIVAAGPIANFIFAIIALYFMYLIGVPSLKPVITSTTPGTAAAQIQVSEPMQVTAISGQPVR
NWEEVNLALVGHIGDDSLTVSLAPLNGLQGLDTTARTYTLDTREWRFDPEKESPITALGLGVYRPAIEPQIALISEGSAA
AKSDLKVGDTLVAINGQNYTDWQAFVDIIQHSANVPVELTVRRNGEQFAISVTPASVKNSDGKEVGVLGVSPAQAQWPEN
MRLQLEYGPIESFAIAADKTWQLVAVSFKMIGKLFTGDVSVKNLSGPISIAQGAGNSANYGLVYFLGFLALISVNLGIIN
LLPLPVLDGGHLLYYFVEVITGKPVSEKVQEIGFRFGAALLLMLMSIALFNDFARL
>Mature_456_residues
MLDFLWNLGSFIVALGLLITAHEYGHFYVARRCGVKVERFSIGFGKAIWRKVGQDGTEYVIAMIPLGGYVKMLDERVEDV
PDELKDQAFNRKTVWQRIAIVAAGPIANFIFAIIALYFMYLIGVPSLKPVITSTTPGTAAAQIQVSEPMQVTAISGQPVR
NWEEVNLALVGHIGDDSLTVSLAPLNGLQGLDTTARTYTLDTREWRFDPEKESPITALGLGVYRPAIEPQIALISEGSAA
AKSDLKVGDTLVAINGQNYTDWQAFVDIIQHSANVPVELTVRRNGEQFAISVTPASVKNSDGKEVGVLGVSPAQAQWPEN
MRLQLEYGPIESFAIAADKTWQLVAVSFKMIGKLFTGDVSVKNLSGPISIAQGAGNSANYGLVYFLGFLALISVNLGIIN
LLPLPVLDGGHLLYYFVEVITGKPVSEKVQEIGFRFGAALLLMLMSIALFNDFARL

Specific function: Unknown

COG id: COG0750

COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1786373, Length=456, Percent_Identity=51.5350877192982, Blast_Score=467, Evalue=1e-133,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR004387
- InterPro:   IPR008915 [H]

Pfam domain/function: PF00595 PDZ; PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 49596; Mature: 49596

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS50106 PDZ ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDFLWNLGSFIVALGLLITAHEYGHFYVARRCGVKVERFSIGFGKAIWRKVGQDGTEYV
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHCCCEEEEEECCHHHHHHHHHCCCCCEEE
IAMIPLGGYVKMLDERVEDVPDELKDQAFNRKTVWQRIAIVAAGPIANFIFAIIALYFMY
EEEECCCHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHEECCHHHHHHHHHHHHHHHH
LIGVPSLKPVITSTTPGTAAAQIQVSEPMQVTAISGQPVRNWEEVNLALVGHIGDDSLTV
HHCCCCCCCEEECCCCCCEEEEEEECCCEEEEEECCCCCCCCCCEEEEEEEEECCCCEEE
SLAPLNGLQGLDTTARTYTLDTREWRFDPEKESPITALGLGVYRPAIEPQIALISEGSAA
EEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEHHHHCCCCCCEEEEEECCCCC
AKSDLKVGDTLVAINGQNYTDWQAFVDIIQHSANVPVELTVRRNGEQFAISVTPASVKNS
CCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCC
DGKEVGVLGVSPAQAQWPENMRLQLEYGPIESFAIAADKTWQLVAVSFKMIGKLFTGDVS
CCCEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCCEEEEHHHHHHHHHHHCCCEE
VKNLSGPISIAQGAGNSANYGLVYFLGFLALISVNLGIINLLPLPVLDGGHLLYYFVEVI
EECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEECCCHHHHHHHHHH
TGKPVSEKVQEIGFRFGAALLLMLMSIALFNDFARL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLDFLWNLGSFIVALGLLITAHEYGHFYVARRCGVKVERFSIGFGKAIWRKVGQDGTEYV
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHCCCEEEEEECCHHHHHHHHHCCCCCEEE
IAMIPLGGYVKMLDERVEDVPDELKDQAFNRKTVWQRIAIVAAGPIANFIFAIIALYFMY
EEEECCCHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHEECCHHHHHHHHHHHHHHHH
LIGVPSLKPVITSTTPGTAAAQIQVSEPMQVTAISGQPVRNWEEVNLALVGHIGDDSLTV
HHCCCCCCCEEECCCCCCEEEEEEECCCEEEEEECCCCCCCCCCEEEEEEEEECCCCEEE
SLAPLNGLQGLDTTARTYTLDTREWRFDPEKESPITALGLGVYRPAIEPQIALISEGSAA
EEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEHHHHCCCCCCEEEEEECCCCC
AKSDLKVGDTLVAINGQNYTDWQAFVDIIQHSANVPVELTVRRNGEQFAISVTPASVKNS
CCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCC
DGKEVGVLGVSPAQAQWPENMRLQLEYGPIESFAIAADKTWQLVAVSFKMIGKLFTGDVS
CCCEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCCEEEEHHHHHHHHHHHCCCEE
VKNLSGPISIAQGAGNSANYGLVYFLGFLALISVNLGIINLLPLPVLDGGHLLYYFVEVI
EECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEECCCHHHHHHHHHH
TGKPVSEKVQEIGFRFGAALLLMLMSIALFNDFARL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]