| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is phhB
Identifier: 117921221
GI number: 117921221
Start: 3319945
End: 3320283
Strand: Reverse
Name: phhB
Synonym: Shewana3_2780
Alternate gene names: NA
Gene position: 3320283-3319945 (Counterclockwise)
Preceding gene: 117921222
Following gene: 117921220
Centisome position: 66.78
GC content: 48.38
Gene sequence:
>339_bases ATGACAGCGTTAACCCAAATGAAATGTGAAGCTTGCCAAGCCGATGCGCCGAAAGTGACCGATGCAGAATTGGCCGAACT TATCCGCATGGTCCCCGATTGGGGCGTGCAAGTGCGTGATGGCATCATGCAATTGGAACGGGTTTATAAGTTTAAAAACT TTAAGTTAGCGATGGCGTTTACCAATAAGTTAGCGGATCTGGCCGAAGAGGAATTCCACCACCCAGGCATTTTAACCGAG TGGGGCAAGGTGACAGTGACTTGGTGGTCACACTCAATCAAGGGCCTGCATAAGAATGACTTCATCATGGCAGCCAAGAC CGACCAGTTGTTAGATTAA
Upstream 100 bases:
>100_bases ACCAAGAAAGCCAGCTAATGGCTGACCGTTAAAAACGAATTGAATAAAGCGTAATAAGGGCAACGGATTGATCTCCCTAA TGTTGCCAAGAGGAGTATGT
Downstream 100 bases:
>100_bases AAAATTCAATTTTAAAATCAGCGCTTTAATTGTGTGTTAGCGCTGATTTTTTCTTCCTGTTACAAATACGCTGTAAACTA GACTTGCCACTTTGAGCGTA
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD [H]
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MTALTQMKCEACQADAPKVTDAELAELIRMVPDWGVQVRDGIMQLERVYKFKNFKLAMAFTNKLADLAEEEFHHPGILTE WGKVTVTWWSHSIKGLHKNDFIMAAKTDQLLD
Sequences:
>Translated_112_residues MTALTQMKCEACQADAPKVTDAELAELIRMVPDWGVQVRDGIMQLERVYKFKNFKLAMAFTNKLADLAEEEFHHPGILTE WGKVTVTWWSHSIKGLHKNDFIMAAKTDQLLD >Mature_111_residues TALTQMKCEACQADAPKVTDAELAELIRMVPDWGVQVRDGIMQLERVYKFKNFKLAMAFTNKLADLAEEEFHHPGILTEW GKVTVTWWSHSIKGLHKNDFIMAAKTDQLLD
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001533 [H]
Pfam domain/function: PF01329 Pterin_4a [H]
EC number: =4.2.1.96 [H]
Molecular weight: Translated: 12808; Mature: 12677
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALTQMKCEACQADAPKVTDAELAELIRMVPDWGVQVRDGIMQLERVYKFKNFKLAMAF CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEHHHH TNKLADLAEEEFHHPGILTEWGKVTVTWWSHSIKGLHKNDFIMAAKTDQLLD HHHHHHHHHHHHCCCCCEECCCCEEEEEECCCCCCCCCCCEEEEECCCCCCC >Mature Secondary Structure TALTQMKCEACQADAPKVTDAELAELIRMVPDWGVQVRDGIMQLERVYKFKNFKLAMAF CCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEHHHH TNKLADLAEEEFHHPGILTEWGKVTVTWWSHSIKGLHKNDFIMAAKTDQLLD HHHHHHHHHHHHCCCCCEECCCCEEEEEECCCCCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA