| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is phhA [H]
Identifier: 117921222
GI number: 117921222
Start: 3320366
End: 3321181
Strand: Reverse
Name: phhA [H]
Synonym: Shewana3_2781
Alternate gene names: 117921222
Gene position: 3321181-3320366 (Counterclockwise)
Preceding gene: 117921229
Following gene: 117921221
Centisome position: 66.79
GC content: 48.65
Gene sequence:
>816_bases ATGACTAAAGAGATAGCACACACTGCGCCCTATGTTGCGCGAAGTGCAGATGATTCAGGGTATATCCATTACCCGCAGGA AGAACATGATATTTGGAGCCAATTATATGCTCGCCAAGCGGTGAAGCTACCGGGGCGTGCCTGTAAGGAATATCTTCAAG GGCTTGCTGCCTTGGCGATGCCGAAGGACCGCATTCCACAATTGGCGGAGATAGACAAAGTATTGCAAGCCACTACTGGA TGGAAAACCGCTGCCGTGCCGGCCTTGATTTCCTTTGGCCGCTTCTTTGAGTTATTGGCCAACAAGGAATTTCCGGTTGC GACCTTTATCCGCCGTAAGGAAGAGTTTGATTACCTGCAAGAGCCGGATATTTTCCATGAGATCTTTGGCCATTGCCCCT TGCTGACCAATCCTTCTTTCGCCCATTTTTCCCATATCTATGGTCAATTGGGCTTAAATGCCAGCAAAGAAGACCGCGTC TTTTTAGCGCGCCTGTATTGGTTTACCGTCGAATTTGGCTTACTCAAACCTCAAGATGGCGAATTGTGTATCTACGGCGG CGGTATTTTAAGCTCTCCCGGCGAAACCTTGTATGCCATGGAAAGCCAAGTGCCGGAGCGTAAGCCCTTCGATCTCTTAG ATGTGCTGCGCACGCCTTACCGTATCGATATTATGCAGCCGATTTATTATGTGATTGAACATATTGATATGCTGGATGAA ATCGCCAAGATGGACATCATGGCCTATGTGGCTAAGGCGCGTCAGTTAGGCTTATTTGCCCCTAAGTATCCGCCCAAGAC CAAGAAAGCCAGCTAA
Upstream 100 bases:
>100_bases GCGTCACATTATCGCGTAAACAATAAACTGTGAGGGAGTTAACAAAAATCGAGGCTTAGATCACTATGGAGGCATTAGCG TCAGCCATGAAGTGAATTTT
Downstream 100 bases:
>100_bases TGGCTGACCGTTAAAAACGAATTGAATAAAGCGTAATAAGGGCAACGGATTGATCTCCCTAATGTTGCCAAGAGGAGTAT GTATGACAGCGTTAACCCAA
Product: phenylalanine 4-monooxygenase
Products: NA
Alternate protein names: PAH; Phe-4-monooxygenase [H]
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MTKEIAHTAPYVARSADDSGYIHYPQEEHDIWSQLYARQAVKLPGRACKEYLQGLAALAMPKDRIPQLAEIDKVLQATTG WKTAAVPALISFGRFFELLANKEFPVATFIRRKEEFDYLQEPDIFHEIFGHCPLLTNPSFAHFSHIYGQLGLNASKEDRV FLARLYWFTVEFGLLKPQDGELCIYGGGILSSPGETLYAMESQVPERKPFDLLDVLRTPYRIDIMQPIYYVIEHIDMLDE IAKMDIMAYVAKARQLGLFAPKYPPKTKKAS
Sequences:
>Translated_271_residues MTKEIAHTAPYVARSADDSGYIHYPQEEHDIWSQLYARQAVKLPGRACKEYLQGLAALAMPKDRIPQLAEIDKVLQATTG WKTAAVPALISFGRFFELLANKEFPVATFIRRKEEFDYLQEPDIFHEIFGHCPLLTNPSFAHFSHIYGQLGLNASKEDRV FLARLYWFTVEFGLLKPQDGELCIYGGGILSSPGETLYAMESQVPERKPFDLLDVLRTPYRIDIMQPIYYVIEHIDMLDE IAKMDIMAYVAKARQLGLFAPKYPPKTKKAS >Mature_270_residues TKEIAHTAPYVARSADDSGYIHYPQEEHDIWSQLYARQAVKLPGRACKEYLQGLAALAMPKDRIPQLAEIDKVLQATTGW KTAAVPALISFGRFFELLANKEFPVATFIRRKEEFDYLQEPDIFHEIFGHCPLLTNPSFAHFSHIYGQLGLNASKEDRVF LARLYWFTVEFGLLKPQDGELCIYGGGILSSPGETLYAMESQVPERKPFDLLDVLRTPYRIDIMQPIYYVIEHIDMLDEI AKMDIMAYVAKARQLGLFAPKYPPKTKKAS
Specific function: Unknown
COG id: COG3186
COG function: function code E; Phenylalanine-4-hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the biopterin-dependent aromatic amino acid hydroxylase family [H]
Homologues:
Organism=Homo sapiens, GI88900503, Length=258, Percent_Identity=34.8837209302326, Blast_Score=135, Evalue=3e-32, Organism=Homo sapiens, GI88900505, Length=258, Percent_Identity=34.8837209302326, Blast_Score=135, Evalue=5e-32, Organism=Homo sapiens, GI88900501, Length=258, Percent_Identity=34.8837209302326, Blast_Score=135, Evalue=5e-32, Organism=Homo sapiens, GI4759248, Length=251, Percent_Identity=34.6613545816733, Blast_Score=131, Evalue=6e-31, Organism=Homo sapiens, GI4557819, Length=252, Percent_Identity=34.1269841269841, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI31795563, Length=223, Percent_Identity=34.9775784753363, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71980736, Length=233, Percent_Identity=36.480686695279, Blast_Score=143, Evalue=8e-35, Organism=Caenorhabditis elegans, GI17531391, Length=218, Percent_Identity=38.9908256880734, Blast_Score=127, Evalue=6e-30, Organism=Caenorhabditis elegans, GI115533973, Length=237, Percent_Identity=30.8016877637131, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI115532103, Length=237, Percent_Identity=30.379746835443, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI71980731, Length=156, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=9e-21, Organism=Drosophila melanogaster, GI17136774, Length=238, Percent_Identity=35.2941176470588, Blast_Score=129, Evalue=2e-30, Organism=Drosophila melanogaster, GI17136776, Length=235, Percent_Identity=35.7446808510638, Blast_Score=129, Evalue=2e-30, Organism=Drosophila melanogaster, GI62472054, Length=224, Percent_Identity=33.9285714285714, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI24660393, Length=224, Percent_Identity=33.9285714285714, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI24654994, Length=250, Percent_Identity=32.8, Blast_Score=106, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001273 - InterPro: IPR018301 - InterPro: IPR019774 - InterPro: IPR005960 [H]
Pfam domain/function: PF00351 Biopterin_H [H]
EC number: =1.14.16.1 [H]
Molecular weight: Translated: 30925; Mature: 30794
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00367 BIOPTERIN_HYDROXYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKEIAHTAPYVARSADDSGYIHYPQEEHDIWSQLYARQAVKLPGRACKEYLQGLAALAM CCCCHHHHCCHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC PKDRIPQLAEIDKVLQATTGWKTAAVPALISFGRFFELLANKEFPVATFIRRKEEFDYLQ CHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC EPDIFHEIFGHCPLLTNPSFAHFSHIYGQLGLNASKEDRVFLARLYWFTVEFGLLKPQDG CCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC ELCIYGGGILSSPGETLYAMESQVPERKPFDLLDVLRTPYRIDIMQPIYYVIEHIDMLDE CEEEECCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHH IAKMDIMAYVAKARQLGLFAPKYPPKTKKAS HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TKEIAHTAPYVARSADDSGYIHYPQEEHDIWSQLYARQAVKLPGRACKEYLQGLAALAM CCCHHHHCCHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC PKDRIPQLAEIDKVLQATTGWKTAAVPALISFGRFFELLANKEFPVATFIRRKEEFDYLQ CHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC EPDIFHEIFGHCPLLTNPSFAHFSHIYGQLGLNASKEDRVFLARLYWFTVEFGLLKPQDG CCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC ELCIYGGGILSSPGETLYAMESQVPERKPFDLLDVLRTPYRIDIMQPIYYVIEHIDMLDE CEEEECCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHH IAKMDIMAYVAKARQLGLFAPKYPPKTKKAS HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8108417; 10984043 [H]