| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921199
Identifier: 117921199
GI number: 117921199
Start: 3292178
End: 3294868
Strand: Direct
Name: 117921199
Synonym: Shewana3_2758
Alternate gene names: NA
Gene position: 3292178-3294868 (Clockwise)
Preceding gene: 117921198
Following gene: 117921200
Centisome position: 66.21
GC content: 46.86
Gene sequence:
>2691_bases ATGAAAACGCCGAATACACCCCATAACACTTCGGATACCTCGACTAACTCTGTGGCTCAAGTACAGGGTCAAGAGACAGC AGCCTCAATGAATTCACTTTCCTTAACGCCATTTTCTCTCAGTCAGACCCTAGATGTGTTTACCTTCCAAGCTTGGGTTA ACACTCAACAGGGCGGGACGGTATTTCAATATTGCGACCAAGCCAATACTCCCTGCTTTATGGTGCAAATAACGCCACTT GGGCATATCGATATTCGAGTAAACAGCCAGTTATTACAGATTGACACTATATCCACCTTAGGCGGCTTAAATGATGGTTA TTGGCATTTATTATCCATCACCTATCAATACCATGAATTAAGCTGTTTTATCGATGGCGATCAAATCCATTTACAGCAAC ATACAACGCCCTTAACGGATGAGGCTAAATTAAAAACCGAAAAACAGACTACTGCGACTTTCGATGGGGAAATCGTTAAT ATTAATTTGATTGAAGCCTGTTTAACTGACACTGAAATTTTAGATTGTTATTTACATCCACAGCAGCAAGCGGCGCTGAT TGACAGCAACTTATATATTTATCCCAAACAACATTCAAAGCAGACTCTCAACTTAATGCCAGCGCAATTAGCAAGACAGG AAGTCATGCTGATTATTTTTAATGATACCGAATATAACTTTAGTAAGCAGAACTTAAACAGCAATAACTTTAACAAGCAG CTACCGAGTATTATCCCCGCCCATGAACGCTGCGCATATATGATTGAATCCAGCAGTGATAACTGGCCACATTTTATTTA TAAGGCGAACTATCAAGCCAAAGAAAGTACCGATATCAAACTGAGCTTTGATATTTTAAAATCCCTCACCCCCCATCGCT CACAGATTGATTTACAGCTGAGTAATGAGCTGGAATTTGATTGCTTTATCAGCCAATCAACTTCGAACCGATTAACGGCC GAGATCCGTATCAGCGAAAATGTGGTCACCCGCCAAGCCAAGCATTTTATGCGCTTTATTAACGAAGTGCGCAGCCACAT TGCCAGCGACAATATCATTACCGATGGCCAGTATTATGCAGAGCAGGATTTTTGGGTAAGCACGGGACAACAGATGCTGG CCTACGAAAACGCCTGCCAACTGTTTAATCGCCGCCTGCAAAAAAGGCCCCTCGCCATCATCAAATGCCGCACCAGCCAA GAGGTCAAGCTGGTCTACAAGACGGCGGTCGATTATCACTTAGCCATTAGTGTGCGTTCCAGCGGCCATGATCACGAAGG GGAAAGTGGCGAGACCAATAGCATAGTGATCGACCTCTCCTTGATGAACAGCATCGAACTCGACCCCATCAGCGGCATTG TCGCCGTTGGGCCAGGTTGCACTATGCAAGCTTTAACCAGTTATCTGGCGCAAAAGGGCTTAATGCTGCCCCACAGCACC AGCGCCTCCCATGCCTTAGCGGGTTTTATTATGGGCGGAGGTTGGGGACCTTGGTGCCGTAAATACGGCATGTGCTGCGA AAGCTTAGTGCAGGCAGAAATCGTGTTGGGCGTAGGTGAAACCCAAGTGGTGTCGGCGGCCAATAAGCCCGAACTCCTCT GGGCGCTCAAAGGGGGAGGCGGTTTAAGCTACGGTATTGTCACTCGTTTTTTTATTCAAACTTTTGCTCTGCCCCCAAGC CTGCTGAAATTTGAACTAGAATGGAACCCGTATCAGCAGGATAGCCAACAGCTACGAGAAACCACCCCGACCCTAAGATT ATTGGAGCGTTGGGAGCAGATTATTCTGGCCGATAATCTGCCTTGTTTGTTGGGCACCAATCTTAAAATCCAAGCCAAAC CCACCGTTTTGCCAGGGGTAAAACCGCCATTAAACACTGGCGTGCAGGATCCTCAAGAGGCCAAACATAACTGCATTATG TACGGCTATTGGGAGGGGAATCCTGCGAGCCTTGCGCACTTTATCAAGACCCAGTTTAGTGAGGTCGGCTTAAAACCCAA AAGAGTGCAAATGGCGGCCATGGGCGGATTAAGCCAATCCTATGGCGATGAATTGATGGAGAGCTGGAACCGCGAAGCCA TTCGGGATTTACAACCCGTCTTAAACCATAGAATGGCCGAATTGATTAATGATACGGATATACAGCTGTATGAAAATCAG CGCCAACATTCGCAGGATTTGCTCAAGCCCGCGCCCCATAGGGTGACATCGCGCTTGGCCCATGCACAGGGGCTAAAACA GGGGCATATCGCGCTTATCGACAGCCTCACCTCATCACAACTGATTGATGGCAATCGGCAATTAGGCTTGTTTACCTATG TCACCCTAAGCGCCATTGCCGGTGATTTTTATCGCACACTTGGTGAAGTGCAAAAAAGCCAGAGCGCCTTCCCCTACAAG GAGCAGGCCTACATTATTCAGTATCAAGCATGGTGGAATAGCGAACTCCAAGAGCAAGCCTTAATGCAGGTTAACTCTGT GTATCCCCGAGTGAATAAGGCGCTCGACTGGATAGACACCTGCCGCGATGCCTGCATTGCCAATAGCTCTGGCGCCTTTA TCAGCTTTAAGGACAATACCATCCCGACCGCACGCTACTTTGGGCAAAATTACCAAATGTTGCAGCAGGTTAAAGCCAGT TATTGTCAAGATCCCTTAAATCATTTTCGCTCACGCAAATCCATTGTGTAG
Upstream 100 bases:
>100_bases CAAGGCCGATGGTCGTGACCGGATAAACGCCTCACTGTAGGCAGTGGTGATTGCAGCGTAAGCAATCGTAAGGGAATGAA ATTAAACAAGGATGTTGCCC
Downstream 100 bases:
>100_bases CAGAGGATTGATGGCTTGCTAGCGCAGTCAACTCATCAATCTCTGCTGATGTGGGGCGGTCAGCATCTTTGCAACACCAC GCCAACACGGCGTTCGCAAT
Product: FAD linked oxidase domain-containing protein
Products: NA
Alternate protein names: 6-HDNO [H]
Number of amino acids: Translated: 896; Mature: 896
Protein sequence:
>896_residues MKTPNTPHNTSDTSTNSVAQVQGQETAASMNSLSLTPFSLSQTLDVFTFQAWVNTQQGGTVFQYCDQANTPCFMVQITPL GHIDIRVNSQLLQIDTISTLGGLNDGYWHLLSITYQYHELSCFIDGDQIHLQQHTTPLTDEAKLKTEKQTTATFDGEIVN INLIEACLTDTEILDCYLHPQQQAALIDSNLYIYPKQHSKQTLNLMPAQLARQEVMLIIFNDTEYNFSKQNLNSNNFNKQ LPSIIPAHERCAYMIESSSDNWPHFIYKANYQAKESTDIKLSFDILKSLTPHRSQIDLQLSNELEFDCFISQSTSNRLTA EIRISENVVTRQAKHFMRFINEVRSHIASDNIITDGQYYAEQDFWVSTGQQMLAYENACQLFNRRLQKRPLAIIKCRTSQ EVKLVYKTAVDYHLAISVRSSGHDHEGESGETNSIVIDLSLMNSIELDPISGIVAVGPGCTMQALTSYLAQKGLMLPHST SASHALAGFIMGGGWGPWCRKYGMCCESLVQAEIVLGVGETQVVSAANKPELLWALKGGGGLSYGIVTRFFIQTFALPPS LLKFELEWNPYQQDSQQLRETTPTLRLLERWEQIILADNLPCLLGTNLKIQAKPTVLPGVKPPLNTGVQDPQEAKHNCIM YGYWEGNPASLAHFIKTQFSEVGLKPKRVQMAAMGGLSQSYGDELMESWNREAIRDLQPVLNHRMAELINDTDIQLYENQ RQHSQDLLKPAPHRVTSRLAHAQGLKQGHIALIDSLTSSQLIDGNRQLGLFTYVTLSAIAGDFYRTLGEVQKSQSAFPYK EQAYIIQYQAWWNSELQEQALMQVNSVYPRVNKALDWIDTCRDACIANSSGAFISFKDNTIPTARYFGQNYQMLQQVKAS YCQDPLNHFRSRKSIV
Sequences:
>Translated_896_residues MKTPNTPHNTSDTSTNSVAQVQGQETAASMNSLSLTPFSLSQTLDVFTFQAWVNTQQGGTVFQYCDQANTPCFMVQITPL GHIDIRVNSQLLQIDTISTLGGLNDGYWHLLSITYQYHELSCFIDGDQIHLQQHTTPLTDEAKLKTEKQTTATFDGEIVN INLIEACLTDTEILDCYLHPQQQAALIDSNLYIYPKQHSKQTLNLMPAQLARQEVMLIIFNDTEYNFSKQNLNSNNFNKQ LPSIIPAHERCAYMIESSSDNWPHFIYKANYQAKESTDIKLSFDILKSLTPHRSQIDLQLSNELEFDCFISQSTSNRLTA EIRISENVVTRQAKHFMRFINEVRSHIASDNIITDGQYYAEQDFWVSTGQQMLAYENACQLFNRRLQKRPLAIIKCRTSQ EVKLVYKTAVDYHLAISVRSSGHDHEGESGETNSIVIDLSLMNSIELDPISGIVAVGPGCTMQALTSYLAQKGLMLPHST SASHALAGFIMGGGWGPWCRKYGMCCESLVQAEIVLGVGETQVVSAANKPELLWALKGGGGLSYGIVTRFFIQTFALPPS LLKFELEWNPYQQDSQQLRETTPTLRLLERWEQIILADNLPCLLGTNLKIQAKPTVLPGVKPPLNTGVQDPQEAKHNCIM YGYWEGNPASLAHFIKTQFSEVGLKPKRVQMAAMGGLSQSYGDELMESWNREAIRDLQPVLNHRMAELINDTDIQLYENQ RQHSQDLLKPAPHRVTSRLAHAQGLKQGHIALIDSLTSSQLIDGNRQLGLFTYVTLSAIAGDFYRTLGEVQKSQSAFPYK EQAYIIQYQAWWNSELQEQALMQVNSVYPRVNKALDWIDTCRDACIANSSGAFISFKDNTIPTARYFGQNYQMLQQVKAS YCQDPLNHFRSRKSIV >Mature_896_residues MKTPNTPHNTSDTSTNSVAQVQGQETAASMNSLSLTPFSLSQTLDVFTFQAWVNTQQGGTVFQYCDQANTPCFMVQITPL GHIDIRVNSQLLQIDTISTLGGLNDGYWHLLSITYQYHELSCFIDGDQIHLQQHTTPLTDEAKLKTEKQTTATFDGEIVN INLIEACLTDTEILDCYLHPQQQAALIDSNLYIYPKQHSKQTLNLMPAQLARQEVMLIIFNDTEYNFSKQNLNSNNFNKQ LPSIIPAHERCAYMIESSSDNWPHFIYKANYQAKESTDIKLSFDILKSLTPHRSQIDLQLSNELEFDCFISQSTSNRLTA EIRISENVVTRQAKHFMRFINEVRSHIASDNIITDGQYYAEQDFWVSTGQQMLAYENACQLFNRRLQKRPLAIIKCRTSQ EVKLVYKTAVDYHLAISVRSSGHDHEGESGETNSIVIDLSLMNSIELDPISGIVAVGPGCTMQALTSYLAQKGLMLPHST SASHALAGFIMGGGWGPWCRKYGMCCESLVQAEIVLGVGETQVVSAANKPELLWALKGGGGLSYGIVTRFFIQTFALPPS LLKFELEWNPYQQDSQQLRETTPTLRLLERWEQIILADNLPCLLGTNLKIQAKPTVLPGVKPPLNTGVQDPQEAKHNCIM YGYWEGNPASLAHFIKTQFSEVGLKPKRVQMAAMGGLSQSYGDELMESWNREAIRDLQPVLNHRMAELINDTDIQLYENQ RQHSQDLLKPAPHRVTSRLAHAQGLKQGHIALIDSLTSSQLIDGNRQLGLFTYVTLSAIAGDFYRTLGEVQKSQSAFPYK EQAYIIQYQAWWNSELQEQALMQVNSVYPRVNKALDWIDTCRDACIANSSGAFISFKDNTIPTARYFGQNYQMLQQVKAS YCQDPLNHFRSRKSIV
Specific function: Unknown
COG id: COG0277
COG function: function code C; FAD/FMN-containing dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012951 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR016168 - InterPro: IPR006094 - InterPro: IPR006093 [H]
Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]
EC number: =1.5.3.6 [H]
Molecular weight: Translated: 100941; Mature: 100941
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTPNTPHNTSDTSTNSVAQVQGQETAASMNSLSLTPFSLSQTLDVFTFQAWVNTQQGGT CCCCCCCCCCCCCCCCCEEEECCHHHHHCCCCCCCCCCCHHHHHHHEEEEEEECCCCCCH VFQYCDQANTPCFMVQITPLGHIDIRVNSQLLQIDTISTLGGLNDGYWHLLSITYQYHEL HHHHHHCCCCCEEEEEECCCCEEEEEECCEEEEEEEHHHHCCCCCCCEEEEEEEEEEEEE SCFIDGDQIHLQQHTTPLTDEAKLKTEKQTTATFDGEIVNINLIEACLTDTEILDCYLHP EEEECCCEEEEEECCCCCCCCHHCCCCCCCCEEECCEEEEEEEHHHHHCCCCEEEEEECC QQQAALIDSNLYIYPKQHSKQTLNLMPAQLARQEVMLIIFNDTEYNFSKQNLNSNNFNKQ CHHHEEEECCEEEEECCCCCHHHHHCHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHH LPSIIPAHERCAYMIESSSDNWPHFIYKANYQAKESTDIKLSFDILKSLTPHRSQIDLQL CCCCCCCHHHHEEEEECCCCCCCEEEEECCCCCCCCCCEEEEHHHHHCCCCCCCEEEEEE SNELEFDCFISQSTSNRLTAEIRISENVVTRQAKHFMRFINEVRSHIASDNIITDGQYYA CCCCCEEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEE EQDFWVSTGQQMLAYENACQLFNRRLQKRPLAIIKCRTSQEVKLVYKTAVDYHLAISVRS CCCHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEECCEEEEEEEEC SGHDHEGESGETNSIVIDLSLMNSIELDPISGIVAVGPGCTMQALTSYLAQKGLMLPHST CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCC SASHALAGFIMGGGWGPWCRKYGMCCESLVQAEIVLGVGETQVVSAANKPELLWALKGGG CCHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHEEECCCHHEEECCCCCCEEEEEECCC GLSYGIVTRFFIQTFALPPSLLKFELEWNPYQQDSQQLRETTPTLRLLERWEQIILADNL CCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCC PCLLGTNLKIQAKPTVLPGVKPPLNTGVQDPQEAKHNCIMYGYWEGNPASLAHFIKTQFS CEEECCCEEEEECCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEECCCHHHHHHHHHHHHH EVGLKPKRVQMAAMGGLSQSYGDELMESWNREAIRDLQPVLNHRMAELINDTDIQLYENQ HHCCCCHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH RQHSQDLLKPAPHRVTSRLAHAQGLKQGHIALIDSLTSSQLIDGNRQLGLFTYVTLSAIA HHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHCCCCCCEEHHHHHHHHHHH GDFYRTLGEVQKSQSAFPYKEQAYIIQYQAWWNSELQEQALMQVNSVYPRVNKALDWIDT HHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH CRDACIANSSGAFISFKDNTIPTARYFGQNYQMLQQVKASYCQDPLNHFRSRKSIV HHHHHCCCCCCCEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKTPNTPHNTSDTSTNSVAQVQGQETAASMNSLSLTPFSLSQTLDVFTFQAWVNTQQGGT CCCCCCCCCCCCCCCCCEEEECCHHHHHCCCCCCCCCCCHHHHHHHEEEEEEECCCCCCH VFQYCDQANTPCFMVQITPLGHIDIRVNSQLLQIDTISTLGGLNDGYWHLLSITYQYHEL HHHHHHCCCCCEEEEEECCCCEEEEEECCEEEEEEEHHHHCCCCCCCEEEEEEEEEEEEE SCFIDGDQIHLQQHTTPLTDEAKLKTEKQTTATFDGEIVNINLIEACLTDTEILDCYLHP EEEECCCEEEEEECCCCCCCCHHCCCCCCCCEEECCEEEEEEEHHHHHCCCCEEEEEECC QQQAALIDSNLYIYPKQHSKQTLNLMPAQLARQEVMLIIFNDTEYNFSKQNLNSNNFNKQ CHHHEEEECCEEEEECCCCCHHHHHCHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHH LPSIIPAHERCAYMIESSSDNWPHFIYKANYQAKESTDIKLSFDILKSLTPHRSQIDLQL CCCCCCCHHHHEEEEECCCCCCCEEEEECCCCCCCCCCEEEEHHHHHCCCCCCCEEEEEE SNELEFDCFISQSTSNRLTAEIRISENVVTRQAKHFMRFINEVRSHIASDNIITDGQYYA CCCCCEEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEE EQDFWVSTGQQMLAYENACQLFNRRLQKRPLAIIKCRTSQEVKLVYKTAVDYHLAISVRS CCCHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEECCEEEEEEEEC SGHDHEGESGETNSIVIDLSLMNSIELDPISGIVAVGPGCTMQALTSYLAQKGLMLPHST CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCC SASHALAGFIMGGGWGPWCRKYGMCCESLVQAEIVLGVGETQVVSAANKPELLWALKGGG CCHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHEEECCCHHEEECCCCCCEEEEEECCC GLSYGIVTRFFIQTFALPPSLLKFELEWNPYQQDSQQLRETTPTLRLLERWEQIILADNL CCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCC PCLLGTNLKIQAKPTVLPGVKPPLNTGVQDPQEAKHNCIMYGYWEGNPASLAHFIKTQFS CEEECCCEEEEECCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEECCCHHHHHHHHHHHHH EVGLKPKRVQMAAMGGLSQSYGDELMESWNREAIRDLQPVLNHRMAELINDTDIQLYENQ HHCCCCHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH RQHSQDLLKPAPHRVTSRLAHAQGLKQGHIALIDSLTSSQLIDGNRQLGLFTYVTLSAIA HHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHCCCCCCEEHHHHHHHHHHH GDFYRTLGEVQKSQSAFPYKEQAYIIQYQAWWNSELQEQALMQVNSVYPRVNKALDWIDT HHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH CRDACIANSSGAFISFKDNTIPTARYFGQNYQMLQQVKASYCQDPLNHFRSRKSIV HHHHHCCCCCCCEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3622516; 2680607; 2115879 [H]