| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is yqgI [H]
Identifier: 117921174
GI number: 117921174
Start: 3262841
End: 3264499
Strand: Reverse
Name: yqgI [H]
Synonym: Shewana3_2733
Alternate gene names: 117921174
Gene position: 3264499-3262841 (Counterclockwise)
Preceding gene: 117921175
Following gene: 117921173
Centisome position: 65.65
GC content: 50.09
Gene sequence:
>1659_bases ATGGGTAAGTGGGTAAAATCAGGCTCGCCATGGATTTGGATGACAGGTGGCGCGGTGAGCATCAGTTTGATTGCAGTATT AGGCCTGTTACTGCTCATTGCATGGCGCGGATTAAGCTACTTTTGGCCTGCAACGATTTATCAATGGGAACTCGAAGATA ACACAGGCGCACGTTCAACCTTAATCGGTGAGATTTACGATAGGGAAGAAGTGCCAACCGAACGCTTAACCGCCGCGGGC CATGTGTTTAAACAGCCACCCGGTGAGTTTGTGACGCGTTACTTAGTGAAAACCGGTAACCGTGAGTTTGTGGGCTTAGA TTTCCGCTGGATTTTAGCAACAGACATTATCAGCCGTAGCGAGCCTGCCGATGTGGCCATGCTCGAGCGTGCTAAAAACG GTAACTTTTATGGCTATCCTGTAGCCGTGATTGAAAACGGTAAACGCTTAGAGCTGAAAAACGATGCGCTTGAATCCTCC TTAATGGAGCATATCGACCGTGCCGTTGCTTTGTCTGACAAAGCGTTATCACTGCAAAAGCAAGATATTGGTGCGATTAA CTACAAGATTGAAAAACTGCGTTTAAAAGAGCGCCGTTACGAGTTAGATGGTGAGTTGACCGATAGCCGTAAGCAGGAGT TAGCTGCGGCGAAAGTGGCGCTCGAACAAGACTATAAACTGCTTGAAAAAGAGCTGTTTGCCCTGCGTGATGAAGCGGCG CGTGACTCCGTTATCGTGCGTGATATGCGTGGTGTTGAGGTCGAGCTTAAGCTGGATTCGGTTCTCGATGTCACCTACGT CAACCACTTAGGTTTGATGGGTAAAATCGGTAAATGGTTTGTGGGACTAGGCCGCTTTGTCAGCGACGACCCACGCGAAG CCAACACCGAGGGCGGCGTGTTCCCTGCGATTTTCGGTACCGTGTTTATGGTGCTGTTGATGGCGATTATCGTGACGCCA TTCGGGGTGATTGCTGCGATTTACCTACATGAATATGCCAAAAAAGGCCCAATCACTAAGATGATCCGCATTGCGGTAAT CAACTTAGCGGGTGTGCCATCGATTGTGTACGGGGTGTTTGGTTTAGGGTTCTTCGTATACATGATGGGCGGCTCGATTG ACCAACTGTTTTACGCCGAAGCCTTACCATCACCGACCTTTGGTTCGCCAGGGGTGATTTGGTCGGCATTAACCTTAGCG ATTCTGACCCTGCCAGTGGTGATTGTATCGACCGAAGAAGGCTTAAGCCGTATTCCTAGCGCGGTGCGTCAAGGCAGTTT GGCTCTGGGCGCGACCAAGGCCGAAACCCTGTGGCGGATTGTGATCCCAATGGCAAGCCCTGCGATCATGACGGGCCTGA TTTTAGCCGTGGCCCGCGCTGCGGGTGAGGTGGCACCGTTAATGCTGGTGGGTGTAGTGAAATTAGCACCGACATTGCCA CTGGACTTAAACTTCCCGTTCGTGCATTTAGAACGTAAATTCATGCACTTAGGGTTCCATATTTATGATGTGGGCTTCCA GAGTCCTAACGTTGAAGCGGCACGTCCTCTGGTATACGCCACCTCCTTCTTGCTGGTAACAGTGATTGTGGCACTGAACT TAACCGCGATTAGTGTGCGTAACCACTTACGTGAAAAATATCGTTCGCTTGAGCATTAA
Upstream 100 bases:
>100_bases TGGTAAGACAGCGTCTGCGTGACCGCTATAGCTCGCTGTAATGGAGATAAGATAATGATACTAAATACTATTTCGCCAAT GACCTTGAGAGGTTTGTGCA
Downstream 100 bases:
>100_bases TCAGCGATTATCCTGAAAGTATTAGGACTGAATATGATTTCTATAGATTCGACAGCCATGAAAACCAACAACTTTGACTT AGCAAACTTGAGCCAGAACG
Product: phosphate ABC transporter inner membrane subunit PstA
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 552; Mature: 551
Protein sequence:
>552_residues MGKWVKSGSPWIWMTGGAVSISLIAVLGLLLLIAWRGLSYFWPATIYQWELEDNTGARSTLIGEIYDREEVPTERLTAAG HVFKQPPGEFVTRYLVKTGNREFVGLDFRWILATDIISRSEPADVAMLERAKNGNFYGYPVAVIENGKRLELKNDALESS LMEHIDRAVALSDKALSLQKQDIGAINYKIEKLRLKERRYELDGELTDSRKQELAAAKVALEQDYKLLEKELFALRDEAA RDSVIVRDMRGVEVELKLDSVLDVTYVNHLGLMGKIGKWFVGLGRFVSDDPREANTEGGVFPAIFGTVFMVLLMAIIVTP FGVIAAIYLHEYAKKGPITKMIRIAVINLAGVPSIVYGVFGLGFFVYMMGGSIDQLFYAEALPSPTFGSPGVIWSALTLA ILTLPVVIVSTEEGLSRIPSAVRQGSLALGATKAETLWRIVIPMASPAIMTGLILAVARAAGEVAPLMLVGVVKLAPTLP LDLNFPFVHLERKFMHLGFHIYDVGFQSPNVEAARPLVYATSFLLVTVIVALNLTAISVRNHLREKYRSLEH
Sequences:
>Translated_552_residues MGKWVKSGSPWIWMTGGAVSISLIAVLGLLLLIAWRGLSYFWPATIYQWELEDNTGARSTLIGEIYDREEVPTERLTAAG HVFKQPPGEFVTRYLVKTGNREFVGLDFRWILATDIISRSEPADVAMLERAKNGNFYGYPVAVIENGKRLELKNDALESS LMEHIDRAVALSDKALSLQKQDIGAINYKIEKLRLKERRYELDGELTDSRKQELAAAKVALEQDYKLLEKELFALRDEAA RDSVIVRDMRGVEVELKLDSVLDVTYVNHLGLMGKIGKWFVGLGRFVSDDPREANTEGGVFPAIFGTVFMVLLMAIIVTP FGVIAAIYLHEYAKKGPITKMIRIAVINLAGVPSIVYGVFGLGFFVYMMGGSIDQLFYAEALPSPTFGSPGVIWSALTLA ILTLPVVIVSTEEGLSRIPSAVRQGSLALGATKAETLWRIVIPMASPAIMTGLILAVARAAGEVAPLMLVGVVKLAPTLP LDLNFPFVHLERKFMHLGFHIYDVGFQSPNVEAARPLVYATSFLLVTVIVALNLTAISVRNHLREKYRSLEH >Mature_551_residues GKWVKSGSPWIWMTGGAVSISLIAVLGLLLLIAWRGLSYFWPATIYQWELEDNTGARSTLIGEIYDREEVPTERLTAAGH VFKQPPGEFVTRYLVKTGNREFVGLDFRWILATDIISRSEPADVAMLERAKNGNFYGYPVAVIENGKRLELKNDALESSL MEHIDRAVALSDKALSLQKQDIGAINYKIEKLRLKERRYELDGELTDSRKQELAAAKVALEQDYKLLEKELFALRDEAAR DSVIVRDMRGVEVELKLDSVLDVTYVNHLGLMGKIGKWFVGLGRFVSDDPREANTEGGVFPAIFGTVFMVLLMAIIVTPF GVIAAIYLHEYAKKGPITKMIRIAVINLAGVPSIVYGVFGLGFFVYMMGGSIDQLFYAEALPSPTFGSPGVIWSALTLAI LTLPVVIVSTEEGLSRIPSAVRQGSLALGATKAETLWRIVIPMASPAIMTGLILAVARAAGEVAPLMLVGVVKLAPTLPL DLNFPFVHLERKFMHLGFHIYDVGFQSPNVEAARPLVYATSFLLVTVIVALNLTAISVRNHLREKYRSLEH
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0581
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790163, Length=192, Percent_Identity=33.3333333333333, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1790164, Length=187, Percent_Identity=32.620320855615, Blast_Score=70, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005672 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 61010; Mature: 60879
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKWVKSGSPWIWMTGGAVSISLIAVLGLLLLIAWRGLSYFWPATIYQWELEDNTGARST CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHH LIGEIYDREEVPTERLTAAGHVFKQPPGEFVTRYLVKTGNREFVGLDFRWILATDIISRS HHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCC EPADVAMLERAKNGNFYGYPVAVIENGKRLELKNDALESSLMEHIDRAVALSDKALSLQK CCCHHHHHHHCCCCCEEEEEEEEEECCCEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHH QDIGAINYKIEKLRLKERRYELDGELTDSRKQELAAAKVALEQDYKLLEKELFALRDEAA HCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDSVIVRDMRGVEVELKLDSVLDVTYVNHLGLMGKIGKWFVGLGRFVSDDPREANTEGGV CCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC FPAIFGTVFMVLLMAIIVTPFGVIAAIYLHEYAKKGPITKMIRIAVINLAGVPSIVYGVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHH GLGFFVYMMGGSIDQLFYAEALPSPTFGSPGVIWSALTLAILTLPVVIVSTEEGLSRIPS HHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEECHHHHHHHHH AVRQGSLALGATKAETLWRIVIPMASPAIMTGLILAVARAAGEVAPLMLVGVVKLAPTLP HHHCCCEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC LDLNFPFVHLERKFMHLGFHIYDVGFQSPNVEAARPLVYATSFLLVTVIVALNLTAISVR CCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NHLREKYRSLEH HHHHHHHHHCCC >Mature Secondary Structure GKWVKSGSPWIWMTGGAVSISLIAVLGLLLLIAWRGLSYFWPATIYQWELEDNTGARST CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHH LIGEIYDREEVPTERLTAAGHVFKQPPGEFVTRYLVKTGNREFVGLDFRWILATDIISRS HHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCC EPADVAMLERAKNGNFYGYPVAVIENGKRLELKNDALESSLMEHIDRAVALSDKALSLQK CCCHHHHHHHCCCCCEEEEEEEEEECCCEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHH QDIGAINYKIEKLRLKERRYELDGELTDSRKQELAAAKVALEQDYKLLEKELFALRDEAA HCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDSVIVRDMRGVEVELKLDSVLDVTYVNHLGLMGKIGKWFVGLGRFVSDDPREANTEGGV CCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC FPAIFGTVFMVLLMAIIVTPFGVIAAIYLHEYAKKGPITKMIRIAVINLAGVPSIVYGVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHH GLGFFVYMMGGSIDQLFYAEALPSPTFGSPGVIWSALTLAILTLPVVIVSTEEGLSRIPS HHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEECHHHHHHHHH AVRQGSLALGATKAETLWRIVIPMASPAIMTGLILAVARAAGEVAPLMLVGVVKLAPTLP HHHCCCEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC LDLNFPFVHLERKFMHLGFHIYDVGFQSPNVEAARPLVYATSFLLVTVIVALNLTAISVR CCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NHLREKYRSLEH HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]