| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is yqgH [H]
Identifier: 117921175
GI number: 117921175
Start: 3264559
End: 3266817
Strand: Reverse
Name: yqgH [H]
Synonym: Shewana3_2734
Alternate gene names: 117921175
Gene position: 3266817-3264559 (Counterclockwise)
Preceding gene: 117921177
Following gene: 117921174
Centisome position: 65.7
GC content: 51.17
Gene sequence:
>2259_bases ATGGAAAGTCAGGTCATTCAACCTGGTTCTGCGCCGCAAAGTATGCTGAAAGGCGGACGTTCAAGTCGCAGGGCATTTAA GGATAAAGCGGCTCAAATTGGGGTCACGATTGGCGGCACTATGGTGTTTGTCGCCTTATTGTTGATCTTCTTCTATTTGC TGTACGTGATTAAACCCATTTTCGACAGCGCGGATGTGACTCCGGTAAAAAGCGTGAGTTATCAACATGCTGAAGTCGCG ACCCTGATGGTCGGCGCCGACGAGCAAAATGAGGTCATGTATCGCGTGGCCGCCGATGGCCAAGTGGATTTCTACACTGT TGCCGATGGCAGCTTACTCTCCAGTTTTACACCGCCATTACCTGCGGGTGTGAGCGTCACCAGCGCCGCGATTGCCGCGC CGAGTGAGCAACGCTTCGCACTGGGGTTAAGTAACGGTCAAGCCTTAATCGTGGGAATCGAATTTGGCTTAAGTTATCCT AACAACAAGCGCCTTATTACCCCAAAACTGCGTTACAGCGCGGGTGAAGCGCCGATCACTATCGATGAGTCGGGCAGCGC TATCCATCATTTAGCCTTTAGTTACAGCAACGATAAAATCAGCTTCGCCTACCAAGATGACAATGGTGCTTGGCGTTTAA GCCGTCTCGAAGGTCAAGAAAACATGATGACCGAAGAGGTGGAATGGACGACCACGGGCGCACTGTTACCTGATGCACCT AAAAAAGTTGCACACCAATTGATGACACCGGATCAACGCCAATTGATGCTGCAAATGGGCAACAAGGTGTTTATCTACAA TATCCGTGATGTTGAAAGCCTAGACTTAATGCAGGTTATTGATGCGGAAAAGGAAAAGTCCAAGGTTAACAACATTGCCT TACTCGCCGGTGCCAGCTCGATTCTGGTGAGCTATGACTCTGGTGTGGTGACCCAGTACTTCCAAGTGAATGGTCCAAAG GGCCGTTTATACAAAGAGATCCGTGAGTTTACCGACTTAGCGCCAGTAGCCTCGATTGCCTCTGAGTTCTACCGTAAAAG CTTTGCCGTGGTGAGCCCAGAGGGTGAGTTATCACTCCTGTACACCACCAGTGAGCGCGAACTGTTTGATGAAAAGTTTG ACCTTAAAAACCCAGGCGTGATCGGCTTTAGCCCTCGTTCGAACGGCCTAGTGGTCGAAGCGAACAAGCAACTGAATATC TTCCACGTGGAAAACTCGCACCCAGAAGTGTCTTGGAGCGCGCTGTGGAATAAGGTGTGGTACGAAGGTTATCCAGAGCC AAAGTTTGTGTGGCAATCCACCTCGGGTAGCGATGACTTTGAAGCCAAGCTCAGCTTAATGCCATTGGCCTATGGCACCA TGAAGGCGGCGTTCTACGCCATGCTGTTTGCCGTGCCATTAGCGATTGCGGGCGCCATCTATACCGCTTACTTTATGTCG CCAAAGGTGCGCGGCATTGTTAAGCCAACGATTGAAATCATGGAAGCCTTACCGACGGTTATCTTAGGTTTCCTCGCTGG ACTTTGGTTAGCACCGCTGATTGAAGAGCACTTGCCGGGCATCTTAGTGCTGCTGGTACTGCTGCCGACGGCGATTCTGG TGTCGGCTTACTCTTGGAGCAAATTACCCGGTACTTGGAAACAGCGTTTACCTGAAGTCTATCAGGAGCTGATGCTCATT CCGGTTATCTGCTTTGTGGGTTGGTTCTCCTTTGCCATTAGCCCGATGATCGAAGTGGCGCTGTTCGATGGTAACACTCG TCAATTTATCACTAACGAATTAGGCATCACCTTCGACCAACGTAACGCGCTGGTAGTGGGTATCGCCATGGGCTTTGCGG TTATTCCAACGATTTTCTCGATTGCAGAAGACGCGATTTTCTCTGTGCCACGCCATTTATCCAACGGCAGTTTGGCGCTG GGCGCGACGCCTTGGCAAACCCTGACACGTGTAGTGCTGTTGACCGCAAGCCCAGGGATTTTCTCAGCGGTGATGATGGG TCTTGGTCGCGCTGTGGGTGAAACCATGATCGTACTGATGGCAACGGGTAACACCGCCATCATGGAATGGAGCGTGTTTG AAGGTATGCGTACGCTGGCGGCTAACATCGCGGTGGAAATGCCTGAGTCGGCGATTGGCAGCTCGCACTACCGTGTGCTG TTCCTCGCGGCCTTCGTTCTGTTCGTATTTACCTTCTTCTTTAACACGATTGCCGAAGTGGTAAGACAGCGTCTGCGTGA CCGCTATAGCTCGCTGTAA
Upstream 100 bases:
>100_bases AGGGTGTTGTTATTGCTCGGTTTATGCTCAAACAGTGTAAGCATAGCATTTCGCAATTCCTAGCGAAAAAACTCACAGGC TTTAATAATAGAGGTTCTTA
Downstream 100 bases:
>100_bases TGGAGATAAGATAATGATACTAAATACTATTTCGCCAATGACCTTGAGAGGTTTGTGCAATGGGTAAGTGGGTAAAATCA GGCTCGCCATGGATTTGGAT
Product: binding-protein-dependent transport systems inner membrane component
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 752; Mature: 752
Protein sequence:
>752_residues MESQVIQPGSAPQSMLKGGRSSRRAFKDKAAQIGVTIGGTMVFVALLLIFFYLLYVIKPIFDSADVTPVKSVSYQHAEVA TLMVGADEQNEVMYRVAADGQVDFYTVADGSLLSSFTPPLPAGVSVTSAAIAAPSEQRFALGLSNGQALIVGIEFGLSYP NNKRLITPKLRYSAGEAPITIDESGSAIHHLAFSYSNDKISFAYQDDNGAWRLSRLEGQENMMTEEVEWTTTGALLPDAP KKVAHQLMTPDQRQLMLQMGNKVFIYNIRDVESLDLMQVIDAEKEKSKVNNIALLAGASSILVSYDSGVVTQYFQVNGPK GRLYKEIREFTDLAPVASIASEFYRKSFAVVSPEGELSLLYTTSERELFDEKFDLKNPGVIGFSPRSNGLVVEANKQLNI FHVENSHPEVSWSALWNKVWYEGYPEPKFVWQSTSGSDDFEAKLSLMPLAYGTMKAAFYAMLFAVPLAIAGAIYTAYFMS PKVRGIVKPTIEIMEALPTVILGFLAGLWLAPLIEEHLPGILVLLVLLPTAILVSAYSWSKLPGTWKQRLPEVYQELMLI PVICFVGWFSFAISPMIEVALFDGNTRQFITNELGITFDQRNALVVGIAMGFAVIPTIFSIAEDAIFSVPRHLSNGSLAL GATPWQTLTRVVLLTASPGIFSAVMMGLGRAVGETMIVLMATGNTAIMEWSVFEGMRTLAANIAVEMPESAIGSSHYRVL FLAAFVLFVFTFFFNTIAEVVRQRLRDRYSSL
Sequences:
>Translated_752_residues MESQVIQPGSAPQSMLKGGRSSRRAFKDKAAQIGVTIGGTMVFVALLLIFFYLLYVIKPIFDSADVTPVKSVSYQHAEVA TLMVGADEQNEVMYRVAADGQVDFYTVADGSLLSSFTPPLPAGVSVTSAAIAAPSEQRFALGLSNGQALIVGIEFGLSYP NNKRLITPKLRYSAGEAPITIDESGSAIHHLAFSYSNDKISFAYQDDNGAWRLSRLEGQENMMTEEVEWTTTGALLPDAP KKVAHQLMTPDQRQLMLQMGNKVFIYNIRDVESLDLMQVIDAEKEKSKVNNIALLAGASSILVSYDSGVVTQYFQVNGPK GRLYKEIREFTDLAPVASIASEFYRKSFAVVSPEGELSLLYTTSERELFDEKFDLKNPGVIGFSPRSNGLVVEANKQLNI FHVENSHPEVSWSALWNKVWYEGYPEPKFVWQSTSGSDDFEAKLSLMPLAYGTMKAAFYAMLFAVPLAIAGAIYTAYFMS PKVRGIVKPTIEIMEALPTVILGFLAGLWLAPLIEEHLPGILVLLVLLPTAILVSAYSWSKLPGTWKQRLPEVYQELMLI PVICFVGWFSFAISPMIEVALFDGNTRQFITNELGITFDQRNALVVGIAMGFAVIPTIFSIAEDAIFSVPRHLSNGSLAL GATPWQTLTRVVLLTASPGIFSAVMMGLGRAVGETMIVLMATGNTAIMEWSVFEGMRTLAANIAVEMPESAIGSSHYRVL FLAAFVLFVFTFFFNTIAEVVRQRLRDRYSSL >Mature_752_residues MESQVIQPGSAPQSMLKGGRSSRRAFKDKAAQIGVTIGGTMVFVALLLIFFYLLYVIKPIFDSADVTPVKSVSYQHAEVA TLMVGADEQNEVMYRVAADGQVDFYTVADGSLLSSFTPPLPAGVSVTSAAIAAPSEQRFALGLSNGQALIVGIEFGLSYP NNKRLITPKLRYSAGEAPITIDESGSAIHHLAFSYSNDKISFAYQDDNGAWRLSRLEGQENMMTEEVEWTTTGALLPDAP KKVAHQLMTPDQRQLMLQMGNKVFIYNIRDVESLDLMQVIDAEKEKSKVNNIALLAGASSILVSYDSGVVTQYFQVNGPK GRLYKEIREFTDLAPVASIASEFYRKSFAVVSPEGELSLLYTTSERELFDEKFDLKNPGVIGFSPRSNGLVVEANKQLNI FHVENSHPEVSWSALWNKVWYEGYPEPKFVWQSTSGSDDFEAKLSLMPLAYGTMKAAFYAMLFAVPLAIAGAIYTAYFMS PKVRGIVKPTIEIMEALPTVILGFLAGLWLAPLIEEHLPGILVLLVLLPTAILVSAYSWSKLPGTWKQRLPEVYQELMLI PVICFVGWFSFAISPMIEVALFDGNTRQFITNELGITFDQRNALVVGIAMGFAVIPTIFSIAEDAIFSVPRHLSNGSLAL GATPWQTLTRVVLLTASPGIFSAVMMGLGRAVGETMIVLMATGNTAIMEWSVFEGMRTLAANIAVEMPESAIGSSHYRVL FLAAFVLFVFTFFFNTIAEVVRQRLRDRYSSL
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4590
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=246, Percent_Identity=25.609756097561, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 82677; Mature: 82677
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESQVIQPGSAPQSMLKGGRSSRRAFKDKAAQIGVTIGGTMVFVALLLIFFYLLYVIKPI CCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHH FDSADVTPVKSVSYQHAEVATLMVGADEQNEVMYRVAADGQVDFYTVADGSLLSSFTPPL CCCCCCCCHHHCCCCHHEEEEEEECCCCCCCEEEEEECCCCEEEEEECCCHHHHCCCCCC PAGVSVTSAAIAAPSEQRFALGLSNGQALIVGIEFGLSYPNNKRLITPKLRYSAGEAPIT CCCCCHHHHHHCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCEEEECHHCCCCCCCCEE IDESGSAIHHLAFSYSNDKISFAYQDDNGAWRLSRLEGQENMMTEEVEWTTTGALLPDAP ECCCCCEEEEEEEEECCCEEEEEEECCCCCEEEEECCCCHHHCCCCCCEEECCCCCCCCH KKVAHQLMTPDQRQLMLQMGNKVFIYNIRDVESLDLMQVIDAEKEKSKVNNIALLAGASS HHHHHHHCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHCCEEEEECCCE ILVSYDSGVVTQYFQVNGPKGRLYKEIREFTDLAPVASIASEFYRKSFAVVSPEGELSLL EEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEE YTTSERELFDEKFDLKNPGVIGFSPRSNGLVVEANKQLNIFHVENSHPEVSWSALWNKVW EECCHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCEEEEEEECCCCCEEHHHHHHHHH YEGYPEPKFVWQSTSGSDDFEAKLSLMPLAYGTMKAAFYAMLFAVPLAIAGAIYTAYFMS HCCCCCCCEEEECCCCCCCCHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PKVRGIVKPTIEIMEALPTVILGFLAGLWLAPLIEEHLPGILVLLVLLPTAILVSAYSWS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC KLPGTWKQRLPEVYQELMLIPVICFVGWFSFAISPMIEVALFDGNTRQFITNELGITFDQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHCCCCEECC RNALVVGIAMGFAVIPTIFSIAEDAIFSVPRHLSNGSLALGATPWQTLTRVVLLTASPGI CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHEEEEECCCHH FSAVMMGLGRAVGETMIVLMATGNTAIMEWSVFEGMRTLAANIAVEMPESAIGSSHYRVL HHHHHHHHHHHHCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHEECCHHHCCCCCHHHH FLAAFVLFVFTFFFNTIAEVVRQRLRDRYSSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MESQVIQPGSAPQSMLKGGRSSRRAFKDKAAQIGVTIGGTMVFVALLLIFFYLLYVIKPI CCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHH FDSADVTPVKSVSYQHAEVATLMVGADEQNEVMYRVAADGQVDFYTVADGSLLSSFTPPL CCCCCCCCHHHCCCCHHEEEEEEECCCCCCCEEEEEECCCCEEEEEECCCHHHHCCCCCC PAGVSVTSAAIAAPSEQRFALGLSNGQALIVGIEFGLSYPNNKRLITPKLRYSAGEAPIT CCCCCHHHHHHCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCEEEECHHCCCCCCCCEE IDESGSAIHHLAFSYSNDKISFAYQDDNGAWRLSRLEGQENMMTEEVEWTTTGALLPDAP ECCCCCEEEEEEEEECCCEEEEEEECCCCCEEEEECCCCHHHCCCCCCEEECCCCCCCCH KKVAHQLMTPDQRQLMLQMGNKVFIYNIRDVESLDLMQVIDAEKEKSKVNNIALLAGASS HHHHHHHCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHCCEEEEECCCE ILVSYDSGVVTQYFQVNGPKGRLYKEIREFTDLAPVASIASEFYRKSFAVVSPEGELSLL EEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEE YTTSERELFDEKFDLKNPGVIGFSPRSNGLVVEANKQLNIFHVENSHPEVSWSALWNKVW EECCHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCEEEEEEECCCCCEEHHHHHHHHH YEGYPEPKFVWQSTSGSDDFEAKLSLMPLAYGTMKAAFYAMLFAVPLAIAGAIYTAYFMS HCCCCCCCEEEECCCCCCCCHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PKVRGIVKPTIEIMEALPTVILGFLAGLWLAPLIEEHLPGILVLLVLLPTAILVSAYSWS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC KLPGTWKQRLPEVYQELMLIPVICFVGWFSFAISPMIEVALFDGNTRQFITNELGITFDQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHCCCCEECC RNALVVGIAMGFAVIPTIFSIAEDAIFSVPRHLSNGSLALGATPWQTLTRVVLLTASPGI CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHEEEEECCCHH FSAVMMGLGRAVGETMIVLMATGNTAIMEWSVFEGMRTLAANIAVEMPESAIGSSHYRVL HHHHHHHHHHHHCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHEECCHHHCCCCCHHHH FLAAFVLFVFTFFFNTIAEVVRQRLRDRYSSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]