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The map label for this gene is yajD [H]

Identifier: 117921159

GI number: 117921159

Start: 3248877

End: 3249239

Strand: Reverse

Name: yajD [H]

Synonym: Shewana3_2718

Alternate gene names: 117921159

Gene position: 3249239-3248877 (Counterclockwise)

Preceding gene: 117921160

Following gene: 117921157

Centisome position: 65.35

GC content: 50.14

Gene sequence:

>363_bases
ATGTCAGCAAATCCAGGCCAGAGTAAGTTAGATCAAGTCTTAGCCCAAGAGCGGGAATACCGTGCAAAGCGTGAGGGCGG
TTACCGCGAGCAGGCGCTCAAATTGTATCCTTGGATCTGTGGCCGCTGTACCCGCGAATTTACCTCAAAAAACTTAAGCG
AGTTGACGGTTCACCATAGAGATCACAACCACGATAACAACCCATCCGACGGCTCGAATTGGGAATTATTGTGCCTCTAC
TGCCACGATAATGAGCATTCACGCTTCGAAGAACTGATCCGCTACGGCAGCACCACCGAAACCAAGCAAGCGGCCGCGAC
CTATAATCCCTTTGCCGATTTAAAGGCGATGATGAAAAAGTAG

Upstream 100 bases:

>100_bases
CATGTCGCCTAAACGCTTTGCGTGTCAGAAATATTGCCCCAAGGAATAACTCGGATTATCCTTGGGGCACTTTTTTAGGG
GTCATCAGTTAGGTGTGAGC

Downstream 100 bases:

>100_bases
TGATAAAAGTAAAAAGCCTGAACTTTCAGGCTTTTTTCGCAAGTCGAGCCTCGGCTTCCAGCCATTTAGCGCGGCTTAGC
ACCTGTTGATTTTCGTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MSANPGQSKLDQVLAQEREYRAKREGGYREQALKLYPWICGRCTREFTSKNLSELTVHHRDHNHDNNPSDGSNWELLCLY
CHDNEHSRFEELIRYGSTTETKQAAATYNPFADLKAMMKK

Sequences:

>Translated_120_residues
MSANPGQSKLDQVLAQEREYRAKREGGYREQALKLYPWICGRCTREFTSKNLSELTVHHRDHNHDNNPSDGSNWELLCLY
CHDNEHSRFEELIRYGSTTETKQAAATYNPFADLKAMMKK
>Mature_119_residues
SANPGQSKLDQVLAQEREYRAKREGGYREQALKLYPWICGRCTREFTSKNLSELTVHHRDHNHDNNPSDGSNWELLCLYC
HDNEHSRFEELIRYGSTTETKQAAATYNPFADLKAMMKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786611, Length=105, Percent_Identity=64.7619047619048, Blast_Score=149, Evalue=4e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002711
- InterPro:   IPR003615
- InterPro:   IPR015880 [H]

Pfam domain/function: PF01844 HNH [H]

EC number: NA

Molecular weight: Translated: 13980; Mature: 13848

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSANPGQSKLDQVLAQEREYRAKREGGYREQALKLYPWICGRCTREFTSKNLSELTVHHR
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
DHNHDNNPSDGSNWELLCLYCHDNEHSRFEELIRYGSTTETKQAAATYNPFADLKAMMKK
CCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure 
SANPGQSKLDQVLAQEREYRAKREGGYREQALKLYPWICGRCTREFTSKNLSELTVHHR
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
DHNHDNNPSDGSNWELLCLYCHDNEHSRFEELIRYGSTTETKQAAATYNPFADLKAMMKK
CCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]