| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is pgcA [H]
Identifier: 117921148
GI number: 117921148
Start: 3235137
End: 3236858
Strand: Reverse
Name: pgcA [H]
Synonym: Shewana3_2707
Alternate gene names: 117921148
Gene position: 3236858-3235137 (Counterclockwise)
Preceding gene: 117921149
Following gene: 117921147
Centisome position: 65.1
GC content: 52.96
Gene sequence:
>1722_bases ATGAATACCCATTTGCAATTACAGGTTAAGCATTGGCTCGAAAATGACCCCGATCCCCGCACTCAGGCACAACTGCAAGC CTTAATCGACGCCGGAAATGACGCCGAACTCGAGGCTCGTTTTGCGGGACGTTTAGAATTTGGTACCGCCGGATTACGCG GTGTGGTGGGCGCTGGTCCTATGGGCATGAATCGCCTAGTGATCCGTCAAACATCTGCTGGGCTTGGTGCCTATTTACTC GAACAAATTAAAGATGCCGCAGAACGTGGTGTCGTGATTGGTTACGATGGCCGCCATGATTCACGCACTTTCGCCCATGA TACCGCCAGTGTGCTTACCGCGATGGGTATTAAGGTGCGCCTCACCGCCAAAGTGGCGCCAACGCCGCTGGTGGCCTTTG GGGTTAAGCATTTTAATGCCGCTGCGGGCATTGTGGTGACCGCCAGCCATAACCCGCCACAATACAATGGCTACAAAGTG TATTGGGAAAACGGCGCACAGATTATCCCGCCCCATGACTCTGGTATCGCCGCTAAGATTGAGCTGGCGGCAACTCAAGC TATTCCGTTTATGGATCAGGTTGAGGCGACCAAACAGGGCAAGCTTATCTGGTTGCAGGACGATTATTACGAAACCTATC GCCGCGGCGTGATGCACGCCAATGTGCTGCAAAATAACACTGCGCCCGAAAAAGTCAGCCTTGCCTATACCGCCATGCAC GGTGTGGGCGCTGAAATGGCGGAAACTGTGCTCAAGGATGCGGGTTTTGCCCAAGTGTATTCGGTGGTGGCGCAGCGCGA GCCCGATGGGGATTTCCCAACGGTTAACTTCCCTAATCCGGAAGAAAAGGGTGCGATGGACTTAGTCATTGCCGAAGCGA AAAAGCATGGCGCCATGCTCGCCTGTGCCAATGACCCCGATGCGGACAGATTTGCGGTTGCAGTTCGTAAGGATGATGGC GAGTATCAAATGCTAACGGGTGACCAAGTGGGTGTGCTCTTTGGTCATTATCTGTTAAGCCATGCGAGCAAGGAGCAGCG TCTGGTGGGCACGACTATTGTCTCCTCCAGTCTATTATCTAAAATCGCTAAAGGCTTTGGCGTTGAAAGCTATACCACGC TCACCGGTTTTAAGTGGCTGATGAATGTGGGAATTGCGCAGAGTCAGCCTGATAACCAATTCCTGTTTGCCTACGAAGAA GCCCTGGGTTACACGGTCGGTAACATGGTGTGGGATAAGGACGGCTTGTCGGCTCTCGTCGCCTTTGCCCAATTAACCGC CGAGCTTGCCGCTAAAGGGCAAACCATTTGGGATAGACTCGAGCAGATTTACCGCGAGCAGGGTTTCCATCTCAATGCTC AAGTTAGCATTGCCTTAAAACCCGACACGCCTAATATTGGCGCGTATCTGCGTGAACATCCACCGCTGGCAATTGGTGAA CATGCCTTGGTGTCGACCGATGATCTCAAGGCATTAGAGCGCCGTTTTGCCGATGGTAAGGTTGAGAAAATCAATCTGCC CGCCAGTGATGTATTAACCTATCGCTTAGCCAATGGCGCGCGGGTTATAGTCAGGCCGTCAGGCACTGAGCCTAAAATCA AGTGTTACTACGAGGTGGTCGAACCTATGACGGCGCAAGACACCTTAGCCAGCGCCCAAGCACGGGCAACTCTGGCGATG GAGGCGTTTATTTCAGCCCATCAGGCGAGCCTGCCTAAATAA
Upstream 100 bases:
>100_bases CCTCTTTACACTTAAATCCGTTGTGAAAAGTGCAAATTCGCTTGTTCTTCGGCATGGATTTTCCTAAGGTGATTGAAAAT GATTTTCACTGAGGCCCCCT
Downstream 100 bases:
>100_bases GCGCCTTGAGCGCACTCAATAAAATCGCTTCACTCAAAGGCTACTGACATGATGTTGTCAGTAGCCTTGTTTTATTCTTG TTGTCGTCCGCTGGTGAACC
Product: phosphoglucomutase/phosphomannomutase alpha/beta/subunit
Products: NA
Alternate protein names: PGM; Alpha-phosphoglucomutase; Glucose phosphomutase [H]
Number of amino acids: Translated: 573; Mature: 573
Protein sequence:
>573_residues MNTHLQLQVKHWLENDPDPRTQAQLQALIDAGNDAELEARFAGRLEFGTAGLRGVVGAGPMGMNRLVIRQTSAGLGAYLL EQIKDAAERGVVIGYDGRHDSRTFAHDTASVLTAMGIKVRLTAKVAPTPLVAFGVKHFNAAAGIVVTASHNPPQYNGYKV YWENGAQIIPPHDSGIAAKIELAATQAIPFMDQVEATKQGKLIWLQDDYYETYRRGVMHANVLQNNTAPEKVSLAYTAMH GVGAEMAETVLKDAGFAQVYSVVAQREPDGDFPTVNFPNPEEKGAMDLVIAEAKKHGAMLACANDPDADRFAVAVRKDDG EYQMLTGDQVGVLFGHYLLSHASKEQRLVGTTIVSSSLLSKIAKGFGVESYTTLTGFKWLMNVGIAQSQPDNQFLFAYEE ALGYTVGNMVWDKDGLSALVAFAQLTAELAAKGQTIWDRLEQIYREQGFHLNAQVSIALKPDTPNIGAYLREHPPLAIGE HALVSTDDLKALERRFADGKVEKINLPASDVLTYRLANGARVIVRPSGTEPKIKCYYEVVEPMTAQDTLASAQARATLAM EAFISAHQASLPK
Sequences:
>Translated_573_residues MNTHLQLQVKHWLENDPDPRTQAQLQALIDAGNDAELEARFAGRLEFGTAGLRGVVGAGPMGMNRLVIRQTSAGLGAYLL EQIKDAAERGVVIGYDGRHDSRTFAHDTASVLTAMGIKVRLTAKVAPTPLVAFGVKHFNAAAGIVVTASHNPPQYNGYKV YWENGAQIIPPHDSGIAAKIELAATQAIPFMDQVEATKQGKLIWLQDDYYETYRRGVMHANVLQNNTAPEKVSLAYTAMH GVGAEMAETVLKDAGFAQVYSVVAQREPDGDFPTVNFPNPEEKGAMDLVIAEAKKHGAMLACANDPDADRFAVAVRKDDG EYQMLTGDQVGVLFGHYLLSHASKEQRLVGTTIVSSSLLSKIAKGFGVESYTTLTGFKWLMNVGIAQSQPDNQFLFAYEE ALGYTVGNMVWDKDGLSALVAFAQLTAELAAKGQTIWDRLEQIYREQGFHLNAQVSIALKPDTPNIGAYLREHPPLAIGE HALVSTDDLKALERRFADGKVEKINLPASDVLTYRLANGARVIVRPSGTEPKIKCYYEVVEPMTAQDTLASAQARATLAM EAFISAHQASLPK >Mature_573_residues MNTHLQLQVKHWLENDPDPRTQAQLQALIDAGNDAELEARFAGRLEFGTAGLRGVVGAGPMGMNRLVIRQTSAGLGAYLL EQIKDAAERGVVIGYDGRHDSRTFAHDTASVLTAMGIKVRLTAKVAPTPLVAFGVKHFNAAAGIVVTASHNPPQYNGYKV YWENGAQIIPPHDSGIAAKIELAATQAIPFMDQVEATKQGKLIWLQDDYYETYRRGVMHANVLQNNTAPEKVSLAYTAMH GVGAEMAETVLKDAGFAQVYSVVAQREPDGDFPTVNFPNPEEKGAMDLVIAEAKKHGAMLACANDPDADRFAVAVRKDDG EYQMLTGDQVGVLFGHYLLSHASKEQRLVGTTIVSSSLLSKIAKGFGVESYTTLTGFKWLMNVGIAQSQPDNQFLFAYEE ALGYTVGNMVWDKDGLSALVAFAQLTAELAAKGQTIWDRLEQIYREQGFHLNAQVSIALKPDTPNIGAYLREHPPLAIGE HALVSTDDLKALERRFADGKVEKINLPASDVLTYRLANGARVIVRPSGTEPKIKCYYEVVEPMTAQDTLASAQARATLAM EAFISAHQASLPK
Specific function: Catalyzes the interconversion between glucose-6- phosphate and alpha-glucose-1-phosphate. This is the first step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI63055049, Length=578, Percent_Identity=36.5051903114187, Blast_Score=343, Evalue=2e-94, Organism=Homo sapiens, GI31377548, Length=576, Percent_Identity=33.6805555555556, Blast_Score=299, Evalue=4e-81, Organism=Escherichia coli, GI1789566, Length=320, Percent_Identity=26.5625, Blast_Score=69, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71993870, Length=563, Percent_Identity=35.1687388987567, Blast_Score=305, Evalue=5e-83, Organism=Caenorhabditis elegans, GI71993878, Length=318, Percent_Identity=36.4779874213836, Blast_Score=201, Evalue=8e-52, Organism=Saccharomyces cerevisiae, GI6323934, Length=598, Percent_Identity=34.9498327759197, Blast_Score=289, Evalue=8e-79, Organism=Drosophila melanogaster, GI20129809, Length=568, Percent_Identity=36.2676056338028, Blast_Score=328, Evalue=8e-90, Organism=Drosophila melanogaster, GI24651977, Length=552, Percent_Identity=35.6884057971014, Blast_Score=310, Evalue=1e-84, Organism=Drosophila melanogaster, GI24653722, Length=567, Percent_Identity=32.2751322751323, Blast_Score=265, Evalue=5e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 62278; Mature: 62278
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTHLQLQVKHWLENDPDPRTQAQLQALIDAGNDAELEARFAGRLEFGTAGLRGVVGAGP CCCEEEEEEHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCCCCCCCCC MGMNRLVIRQTSAGLGAYLLEQIKDAAERGVVIGYDGRHDSRTFAHDTASVLTAMGIKVR CCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCEEEE LTAKVAPTPLVAFGVKHFNAAAGIVVTASHNPPQYNGYKVYWENGAQIIPPHDSGIAAKI EEEECCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCEEECCCCCCCEEEE ELAATQAIPFMDQVEATKQGKLIWLQDDYYETYRRGVMHANVLQNNTAPEKVSLAYTAMH EEEHHHCCCCHHHHHHCCCCCEEEEECHHHHHHHHCCEEHHHHCCCCCCCCEEEEEHHHH GVGAEMAETVLKDAGFAQVYSVVAQREPDGDFPTVNFPNPEEKGAMDLVIAEAKKHGAML CCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEE ACANDPDADRFAVAVRKDDGEYQMLTGDQVGVLFGHYLLSHASKEQRLVGTTIVSSSLLS EECCCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH KIAKGFGVESYTTLTGFKWLMNVGIAQSQPDNQFLFAYEEALGYTVGNMVWDKDGLSALV HHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHCCCHHCEEECCCHHHHHH AFAQLTAELAAKGQTIWDRLEQIYREQGFHLNAQVSIALKPDTPNIGAYLREHPPLAIGE HHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCHHHHCCCCCEECC HALVSTDDLKALERRFADGKVEKINLPASDVLTYRLANGARVIVRPSGTEPKIKCYYEVV CEEECCHHHHHHHHHHCCCCEEEECCCHHHHEEEEECCCCEEEEECCCCCCCEEEEEEHH EPMTAQDTLASAQARATLAMEAFISAHQASLPK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNTHLQLQVKHWLENDPDPRTQAQLQALIDAGNDAELEARFAGRLEFGTAGLRGVVGAGP CCCEEEEEEHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCCCCCCCCC MGMNRLVIRQTSAGLGAYLLEQIKDAAERGVVIGYDGRHDSRTFAHDTASVLTAMGIKVR CCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCEEEE LTAKVAPTPLVAFGVKHFNAAAGIVVTASHNPPQYNGYKVYWENGAQIIPPHDSGIAAKI EEEECCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCEEECCCCCCCEEEE ELAATQAIPFMDQVEATKQGKLIWLQDDYYETYRRGVMHANVLQNNTAPEKVSLAYTAMH EEEHHHCCCCHHHHHHCCCCCEEEEECHHHHHHHHCCEEHHHHCCCCCCCCEEEEEHHHH GVGAEMAETVLKDAGFAQVYSVVAQREPDGDFPTVNFPNPEEKGAMDLVIAEAKKHGAML CCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEE ACANDPDADRFAVAVRKDDGEYQMLTGDQVGVLFGHYLLSHASKEQRLVGTTIVSSSLLS EECCCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH KIAKGFGVESYTTLTGFKWLMNVGIAQSQPDNQFLFAYEEALGYTVGNMVWDKDGLSALV HHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHCCCHHCEEECCCHHHHHH AFAQLTAELAAKGQTIWDRLEQIYREQGFHLNAQVSIALKPDTPNIGAYLREHPPLAIGE HHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCHHHHCCCCCEECC HALVSTDDLKALERRFADGKVEKINLPASDVLTYRLANGARVIVRPSGTEPKIKCYYEVV CEEECCHHHHHHHHHHCCCCEEEECCCHHHHEEEEECCCCEEEEECCCCCCCEEEEEEHH EPMTAQDTLASAQARATLAMEAFISAHQASLPK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 2127799 [H]