| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921149
Identifier: 117921149
GI number: 117921149
Start: 3237131
End: 3237436
Strand: Reverse
Name: 117921149
Synonym: Shewana3_2708
Alternate gene names: NA
Gene position: 3237436-3237131 (Counterclockwise)
Preceding gene: 117921150
Following gene: 117921148
Centisome position: 65.11
GC content: 44.77
Gene sequence:
>306_bases ATGTCTATGGTGAGTGCGAAAGAATTCGCCCATTGGCTAAAGAATCGCTTCGAGGGTGTTGAAAAGGGCGTGAGTTTAAC CCGAGAAGATATTAATCAGCTGACCGGGCGCCAAAATTTTTCATTGGTGTTTGTCCATGATATTCACTACGAGTTGATGC GTTTCGGCATCGCCTTTGTGACAGACACTGGGCGCGATACTTACTATCTTGTGCGGGTTTTCGATAAACCTTGGCGCAAT CAATTGGAGCAGGACTCTGAAAAGGAGCTGTTTTCTAACGTAGTGTCGATTAATTTACTGCGTTAA
Upstream 100 bases:
>100_bases CTAAGATGTTGAGCATTACGCCACGCCATCATTACAAATAATCGAACAAATGACAGCGAGCCAGGCCGTTATTGCCTAGG GTCGTACGAGGAGAAAGATC
Downstream 100 bases:
>100_bases GACGGCAATTCGTGGCATTTATCTGTGCAATTTTGCTTGAGGTGGTGAGTGCTTTCGCAGCACCACAGCGCGCGGCTGTG CAAGTACGACAGCCCCTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MSMVSAKEFAHWLKNRFEGVEKGVSLTREDINQLTGRQNFSLVFVHDIHYELMRFGIAFVTDTGRDTYYLVRVFDKPWRN QLEQDSEKELFSNVVSINLLR
Sequences:
>Translated_101_residues MSMVSAKEFAHWLKNRFEGVEKGVSLTREDINQLTGRQNFSLVFVHDIHYELMRFGIAFVTDTGRDTYYLVRVFDKPWRN QLEQDSEKELFSNVVSINLLR >Mature_100_residues SMVSAKEFAHWLKNRFEGVEKGVSLTREDINQLTGRQNFSLVFVHDIHYELMRFGIAFVTDTGRDTYYLVRVFDKPWRNQ LEQDSEKELFSNVVSINLLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11960; Mature: 11829
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMVSAKEFAHWLKNRFEGVEKGVSLTREDINQLTGRQNFSLVFVHDIHYELMRFGIAFV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHE TDTGRDTYYLVRVFDKPWRNQLEQDSEKELFSNVVSINLLR ECCCCCEEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SMVSAKEFAHWLKNRFEGVEKGVSLTREDINQLTGRQNFSLVFVHDIHYELMRFGIAFV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHE TDTGRDTYYLVRVFDKPWRNQLEQDSEKELFSNVVSINLLR ECCCCCEEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA