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The map label for this gene is 117921145

Identifier: 117921145

GI number: 117921145

Start: 3233172

End: 3233870

Strand: Reverse

Name: 117921145

Synonym: Shewana3_2704

Alternate gene names: NA

Gene position: 3233870-3233172 (Counterclockwise)

Preceding gene: 117921146

Following gene: 117921143

Centisome position: 65.04

GC content: 52.22

Gene sequence:

>699_bases
ATGCGCCGTGCCGACCGCCTATTTCAAATAGTGCAAATTCTTAAACATCGACGACTGACGACCGCCCAAGAGCTGGCGGA
TCGTTTAGAAGTCTCGACCCGCACCGTGTACCGCGATGTGCAGGATTTGTGTTTGAGCGGCATTCCCATTGAAGGGGAGG
CGGGCGTGGGCTATCTATTGCGCCACGAAGTGAATGTGCCGCCACTGATGTTTAACGAGGCCGAATTAGAGGCGATTCAA
GTCGGCATGCGTATGGTGCAAACATGGGGCGGCAAAGAGCTCGGCAGTGCGGCGCGTCAGGCGATGATAAAAGTGGAAGC
CGTGCTACCTAAGCGTTTGCAAGCCTATCAATCCTTGATGTTTTCGCCGGATTTTTATTTAGATTCCAACGAGTTTCAGT
TTCTCGATCCGCTGCGTAATGCGGCACAGCGCCGTGAATACGTCAAACTCTTCTATCAAGATGTGAATAAAGCCCTGACC
GAGCGCGAAGTGCGGCCGCTGGCCATCTATTTTTGGCGTGGCACTTGGACCTTGCTGACCTGGTGTGAGTTACGCCAAGA
TTTTCGCAACTTTCGGGTCGATCGTATCACAGGGTTATTAAGGCTTAACCGCCATTTTGACCCGACGCCCGGGCAGGAAT
TAGAGGATTATATTTGCCTGATGGACGCTCAGATGCGCGAGCGTGAAGCTGAAAAATAA

Upstream 100 bases:

>100_bases
ATAACACTGTGCCAATACACTATCGCTTGGGCTAGCCCACTTTAGCGGGTAAGATCCCTTAACTTTCGCAGCAAGCCAAT
TTGAAGTGTGATTACTGTCC

Downstream 100 bases:

>100_bases
AGCCACTCATTGAGTGGCTTTATTGTTGTTAAATTTACGAATTTTGCTTAGAAACTGCCGCGGATCCCGAGGGCGATTTG
GGTGCCAAAACGCTCAAGGT

Product: helix-turn-helix, type 11 domain-containing protein

Products: NA

Alternate protein names: Transcriptional Regulator; DeoR Family Transcriptional Regulator; Helix-Turn-Helix Domain Containing Protein Type; DeoR-Family Transcriptional Regulator; HTH Domain Family; Transcription Regulator Protein; Regulatory Protein; Repressor Transcription Regulator Protein; Transcriptional Regulator Protein; HTH Type; HTH Domain-Containing Protein; Regulatory Protein DeoR; DeoR Family Transriptional Regulator; Transcription Repressor; Transcription Regulator Protein DeoR Family; DeoR-Family Protein Transcriptional Regulator; HTH Domain-Containing; Helix-Turn-Helix Domain-Containing Protein; HTH Domain Protein; Transcriptional Regulator-Like; Bacterial Regulatory Protein DeoR Family; Protein Containing HTH Domain; Transriptional Regulator DeoR Family; NB-Dependent Receptor; Regulatory Protein Deor; Transcription Regulator; LOW QUALITY PROTEIN Helix-Turn-Helix Type; Transcriptional Repressor

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MRRADRLFQIVQILKHRRLTTAQELADRLEVSTRTVYRDVQDLCLSGIPIEGEAGVGYLLRHEVNVPPLMFNEAELEAIQ
VGMRMVQTWGGKELGSAARQAMIKVEAVLPKRLQAYQSLMFSPDFYLDSNEFQFLDPLRNAAQRREYVKLFYQDVNKALT
EREVRPLAIYFWRGTWTLLTWCELRQDFRNFRVDRITGLLRLNRHFDPTPGQELEDYICLMDAQMREREAEK

Sequences:

>Translated_232_residues
MRRADRLFQIVQILKHRRLTTAQELADRLEVSTRTVYRDVQDLCLSGIPIEGEAGVGYLLRHEVNVPPLMFNEAELEAIQ
VGMRMVQTWGGKELGSAARQAMIKVEAVLPKRLQAYQSLMFSPDFYLDSNEFQFLDPLRNAAQRREYVKLFYQDVNKALT
EREVRPLAIYFWRGTWTLLTWCELRQDFRNFRVDRITGLLRLNRHFDPTPGQELEDYICLMDAQMREREAEK
>Mature_232_residues
MRRADRLFQIVQILKHRRLTTAQELADRLEVSTRTVYRDVQDLCLSGIPIEGEAGVGYLLRHEVNVPPLMFNEAELEAIQ
VGMRMVQTWGGKELGSAARQAMIKVEAVLPKRLQAYQSLMFSPDFYLDSNEFQFLDPLRNAAQRREYVKLFYQDVNKALT
EREVRPLAIYFWRGTWTLLTWCELRQDFRNFRVDRITGLLRLNRHFDPTPGQELEDYICLMDAQMREREAEK

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27347; Mature: 27347

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRADRLFQIVQILKHRRLTTAQELADRLEVSTRTVYRDVQDLCLSGIPIEGEAGVGYLL
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
RHEVNVPPLMFNEAELEAIQVGMRMVQTWGGKELGSAARQAMIKVEAVLPKRLQAYQSLM
EECCCCCCEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSPDFYLDSNEFQFLDPLRNAAQRREYVKLFYQDVNKALTEREVRPLAIYFWRGTWTLLT
CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHH
WCELRQDFRNFRVDRITGLLRLNRHFDPTPGQELEDYICLMDAQMREREAEK
HHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRRADRLFQIVQILKHRRLTTAQELADRLEVSTRTVYRDVQDLCLSGIPIEGEAGVGYLL
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
RHEVNVPPLMFNEAELEAIQVGMRMVQTWGGKELGSAARQAMIKVEAVLPKRLQAYQSLM
EECCCCCCEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSPDFYLDSNEFQFLDPLRNAAQRREYVKLFYQDVNKALTEREVRPLAIYFWRGTWTLLT
CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHH
WCELRQDFRNFRVDRITGLLRLNRHFDPTPGQELEDYICLMDAQMREREAEK
HHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA