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The map label for this gene is 117921128

Identifier: 117921128

GI number: 117921128

Start: 3214353

End: 3215249

Strand: Reverse

Name: 117921128

Synonym: Shewana3_2687

Alternate gene names: NA

Gene position: 3215249-3214353 (Counterclockwise)

Preceding gene: 117921137

Following gene: 117921122

Centisome position: 64.66

GC content: 37.57

Gene sequence:

>897_bases
ATGAGAGATGAAAACCCGCTACTCGACAAAGATGGTCAACCCTACAGTCGAGTGAACTTTAAGCACAATAAACAAAAAGC
TTTATGTTCGTTAAAAGGTGTTTTGACCGGTGTAATTTGCGATCAAAAGCTGAAGCCCTCTGAGTTGCTATACCTTGAGT
CGTGGCTTAACGACAATGAGTTTTTACAGGATGACGCAGATACTGCGGACTTACTCGATGCTATTGGTGATGTGCTAAAC
GATGGGATGATTACTGATGAGGAACATGAAGATATTTTCTGTTTGCTTGAAGATGTTATCGCTTATAAAACGTTAGATGA
CTCTAAGTGTAAAGATCATATGAATGTTCTTATCGGCATTTTAAAAGGTATTACAGCCGATGCCGATATTAATGATGCTG
AAGTTTTGTTTTTTAAAAAATGGCTTAGTGAAAACCCCGATATTGCTAATATTTGGCCTGTTCCAAAATTAACTGAAAAA
CTTGATCAAATTCTTCTAGATGGAGTGATTACAAGTGAAGAGCGAAAAGATCTATACCAATTAGTCACAATGCTCATTGG
CAATGACTTTAGCGAAACAGGTGATGCAGCAGACTCTCCTACCCAGAGCTTCGATAACATCATGAATATTACCCATAAGG
ATAAATGTTTTTGTTTTACTGGTAAGTTTAAACAATTAAAACGAGTACAACTTGAAGATAAAGCAAAAAGTTTGGGCGCG
GTAATAGCCAAGAAAATCCCTACGTTATCGACTGACTATGTAGTCGTAGGCTCTTTGTCTAGTCGAGATTGGTTGTATTC
AAGTCATGGTCTAAAAATACAACATGCTAAGAAGATGCAGGAAAGTGGCCACCATATTAGTATTATTTCTGAAGATCAGT
GGCTAGCATCACTCTAG

Upstream 100 bases:

>100_bases
TAGAACAGGTTGATGAAAAACGAAAAGTGCATTATGTTTTTGATTTAAATAGGATGGTTAGCTGTATTTCAACTCAACGA
CTATGTAATAGGGATATATT

Downstream 100 bases:

>100_bases
TTTTAAAAGGAGGCTATGGTTAATAAACATAAGAAATTTATGAGAAAAGGCGGCCAAGTTAACCAAAGTCGTAGTTTTGG
GTTTGCTTTTAATTGTGTTG

Product: NAD-dependent DNA ligase

Products: NA

Alternate protein names: 3-5' Exonuclease; BRCT Domain Protein

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MRDENPLLDKDGQPYSRVNFKHNKQKALCSLKGVLTGVICDQKLKPSELLYLESWLNDNEFLQDDADTADLLDAIGDVLN
DGMITDEEHEDIFCLLEDVIAYKTLDDSKCKDHMNVLIGILKGITADADINDAEVLFFKKWLSENPDIANIWPVPKLTEK
LDQILLDGVITSEERKDLYQLVTMLIGNDFSETGDAADSPTQSFDNIMNITHKDKCFCFTGKFKQLKRVQLEDKAKSLGA
VIAKKIPTLSTDYVVVGSLSSRDWLYSSHGLKIQHAKKMQESGHHISIISEDQWLASL

Sequences:

>Translated_298_residues
MRDENPLLDKDGQPYSRVNFKHNKQKALCSLKGVLTGVICDQKLKPSELLYLESWLNDNEFLQDDADTADLLDAIGDVLN
DGMITDEEHEDIFCLLEDVIAYKTLDDSKCKDHMNVLIGILKGITADADINDAEVLFFKKWLSENPDIANIWPVPKLTEK
LDQILLDGVITSEERKDLYQLVTMLIGNDFSETGDAADSPTQSFDNIMNITHKDKCFCFTGKFKQLKRVQLEDKAKSLGA
VIAKKIPTLSTDYVVVGSLSSRDWLYSSHGLKIQHAKKMQESGHHISIISEDQWLASL
>Mature_298_residues
MRDENPLLDKDGQPYSRVNFKHNKQKALCSLKGVLTGVICDQKLKPSELLYLESWLNDNEFLQDDADTADLLDAIGDVLN
DGMITDEEHEDIFCLLEDVIAYKTLDDSKCKDHMNVLIGILKGITADADINDAEVLFFKKWLSENPDIANIWPVPKLTEK
LDQILLDGVITSEERKDLYQLVTMLIGNDFSETGDAADSPTQSFDNIMNITHKDKCFCFTGKFKQLKRVQLEDKAKSLGA
VIAKKIPTLSTDYVVVGSLSSRDWLYSSHGLKIQHAKKMQESGHHISIISEDQWLASL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33579; Mature: 33579

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS50172 BRCT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDENPLLDKDGQPYSRVNFKHNKQKALCSLKGVLTGVICDQKLKPSELLYLESWLNDNE
CCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCH
FLQDDADTADLLDAIGDVLNDGMITDEEHEDIFCLLEDVIAYKTLDDSKCKDHMNVLIGI
HHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LKGITADADINDAEVLFFKKWLSENPDIANIWPVPKLTEKLDQILLDGVITSEERKDLYQ
HHCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHCCCHHHHHHHH
LVTMLIGNDFSETGDAADSPTQSFDNIMNITHKDKCFCFTGKFKQLKRVQLEDKAKSLGA
HHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHH
VIAKKIPTLSTDYVVVGSLSSRDWLYSSHGLKIQHAKKMQESGHHISIISEDQWLASL
HHHHHCCCCCCCEEEEECCCCCCCEECCCCEEHHHHHHHHHCCCEEEEEECCCHHHCC
>Mature Secondary Structure
MRDENPLLDKDGQPYSRVNFKHNKQKALCSLKGVLTGVICDQKLKPSELLYLESWLNDNE
CCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCH
FLQDDADTADLLDAIGDVLNDGMITDEEHEDIFCLLEDVIAYKTLDDSKCKDHMNVLIGI
HHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LKGITADADINDAEVLFFKKWLSENPDIANIWPVPKLTEKLDQILLDGVITSEERKDLYQ
HHCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHCCCHHHHHHHH
LVTMLIGNDFSETGDAADSPTQSFDNIMNITHKDKCFCFTGKFKQLKRVQLEDKAKSLGA
HHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHH
VIAKKIPTLSTDYVVVGSLSSRDWLYSSHGLKIQHAKKMQESGHHISIISEDQWLASL
HHHHHCCCCCCCEEEEECCCCCCCEECCCCEEHHHHHHHHHCCCEEEEEECCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA