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The map label for this gene is 117921061

Identifier: 117921061

GI number: 117921061

Start: 3125675

End: 3126184

Strand: Direct

Name: 117921061

Synonym: Shewana3_2620

Alternate gene names: NA

Gene position: 3125675-3126184 (Clockwise)

Preceding gene: 117921055

Following gene: 117921071

Centisome position: 62.86

GC content: 40.78

Gene sequence:

>510_bases
ATGATCTACTCATTTCGTAACTCAGGTTTTAGGGATCCTGAAACAGGGGTCTATAACCAAACCTATTTCATGGAAGTATT
CAACCGAGAGTGGCACAGGCACATACGTGAGCAACAAAGCTTGGCGTTATTGTATCTGTGCCCTCACATTCATGAAACCG
TCAAACAACCCCATTTACTCGAATTCTTTACTAAACAGGTACAAGAAGCACTGCTACGGGCGACAGATCTGATTGCAAGG
TTAGATCACAACCATTTTGCGTTAGGACTTTTCAATATTGATGAGGAAGGTACTGAGGTGGTGTTAAAGCGTATAGAGCA
ACATATTCAGGAATTTAATCAAGAATTTGGTAAAAATCACAAACTGAAAATCGATTATAAACTCGCTGCCTGCCTGTGCT
TACCGACCCAAGAAAAGCGTATTGAATCCTTATTTAACAATGTCTCAAAGCTGTCACTCGAACTCGAACGCAACCAGCAA
CAATCGCAGGTGTTAGTAAAGCTTCAATAA

Upstream 100 bases:

>100_bases
GCTAATAAACTTAATTTCATCTTTTATATTTCTCCTTTTGGGTCCGTGATAGCCAAACTCTTCCTATACTTAGTTCAAAG
TCTGCTTACGGGATTCATCT

Downstream 100 bases:

>100_bases
AGAAAAAGCCCCTTACGGGGCTTTTTAGATCTGTATCGCGAATACAGTGAATTACAGTTCGACGTTGTGCATACGCGCTT
TTTCTTTGATATAAGCGATA

Product: diguanylate cyclase

Products: NA

Alternate protein names: GGDEF Domain-Containing Protein; Response Regulator Receiver Protein

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MIYSFRNSGFRDPETGVYNQTYFMEVFNREWHRHIREQQSLALLYLCPHIHETVKQPHLLEFFTKQVQEALLRATDLIAR
LDHNHFALGLFNIDEEGTEVVLKRIEQHIQEFNQEFGKNHKLKIDYKLAACLCLPTQEKRIESLFNNVSKLSLELERNQQ
QSQVLVKLQ

Sequences:

>Translated_169_residues
MIYSFRNSGFRDPETGVYNQTYFMEVFNREWHRHIREQQSLALLYLCPHIHETVKQPHLLEFFTKQVQEALLRATDLIAR
LDHNHFALGLFNIDEEGTEVVLKRIEQHIQEFNQEFGKNHKLKIDYKLAACLCLPTQEKRIESLFNNVSKLSLELERNQQ
QSQVLVKLQ
>Mature_169_residues
MIYSFRNSGFRDPETGVYNQTYFMEVFNREWHRHIREQQSLALLYLCPHIHETVKQPHLLEFFTKQVQEALLRATDLIAR
LDHNHFALGLFNIDEEGTEVVLKRIEQHIQEFNQEFGKNHKLKIDYKLAACLCLPTQEKRIESLFNNVSKLSLELERNQQ
QSQVLVKLQ

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20124; Mature: 20124

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYSFRNSGFRDPETGVYNQTYFMEVFNREWHRHIREQQSLALLYLCPHIHETVKQPHLL
CEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHH
EFFTKQVQEALLRATDLIARLDHNHFALGLFNIDEEGTEVVLKRIEQHIQEFNQEFGKNH
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCC
KLKIDYKLAACLCLPTQEKRIESLFNNVSKLSLELERNQQQSQVLVKLQ
EEEEEEEHEEHEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECC
>Mature Secondary Structure
MIYSFRNSGFRDPETGVYNQTYFMEVFNREWHRHIREQQSLALLYLCPHIHETVKQPHLL
CEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHH
EFFTKQVQEALLRATDLIARLDHNHFALGLFNIDEEGTEVVLKRIEQHIQEFNQEFGKNH
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCC
KLKIDYKLAACLCLPTQEKRIESLFNNVSKLSLELERNQQQSQVLVKLQ
EEEEEEEHEEHEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA