| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921060
Identifier: 117921060
GI number: 117921060
Start: 3123759
End: 3125594
Strand: Reverse
Name: 117921060
Synonym: Shewana3_2619
Alternate gene names: NA
Gene position: 3125594-3123759 (Counterclockwise)
Preceding gene: 117921062
Following gene: 117921059
Centisome position: 62.86
GC content: 47.44
Gene sequence:
>1836_bases ATGAAATTAAGTTTATTAGCGGGAACGATAGCGTTAGTGTTTGCTTTACAAGGCTGCTCAAAGCCTGAGACAACGGCTGC GGTACAGGAAGGTTCGGCTCCATCAGCACCCGCCCAAGCTCAAACTGAAACTCAAACCGCAGAGTCTAAATACGCAGCCT TAGTTGATGCCTATTTTAAAGATTACTTAAAGTTAGAGCCGATTTACGCCACTTTTGTCGGTGTTAATGATTACAACGCG CAGTTTGGTGGAGACTTAACCGAGGAATATCTTAAGGCGCGTCATGATCTTAATACCCGTTATTTAGCGCAAGTGAGAGC GATTGACCTTGAGCAATTGCCAGCCGATTTACAACTCAGCTATGCGCTGTTTGTTTATGACCGCGAAATGGCTCTAGTGG ACGAAACCTTCCCATCACGCTTTATGCCGATCAGCCAATTCTACAGCACAGTGATCACTATGGTGCAACTGGGGAGCGGT GAGAGTGCGCAGCCCTTTAACACAGTACAGGATTATCGCAACTGGGAGCAGCGTGTTAACGGCTTTATCGATTGGATCCA ATTGGCCGAGAATCGCATGAATGAAGGTATTGCCAGTAAAGTGGTGTTACCGCGCGTGTTAGTTGAGCGGATTATTCCAC AGCTTGATGCCATGCTTACTACGGATGCTAGCCAAAGCATTTTCTATTCACCGATTAATCACTTCCCAGAAGCGTTTTCG GATCAAGATAAGGCTGAGTTAACAGCAAGTTATCAGGCGATGATTAATGAGCGTTTAGTGCCTGCATTAACGGGGCTGCG CGATTACTTCAAGCAGACTTACTTACCTAAGTCCCGCGCGACGGACGGTTGGTCTGGTCTACCAAACGGTAAAGCTTGGT ATCAGCATTTAGCCAATTCCCATACCACCACGACCATGCCGGTGGATGAAATTCATCAAATCGGTCTGAATGAGGTCGCG CGCATTCTTTCTGAGATGGACAAAGTCCGTGAGCAAGTGGGTTTTAAAGGGGATTTAAAAGCCTTTTTCGCCTCCTTATC GTCTGAACCACAATACTTCTATAACGATCGCCAAGGCCTAATCGATGGCTACATGGTGTTAAAAGATAAGATTAACCAAG TATTGCCACAGTATTTTAATGTGATGCCAAAGGCCGACTATGTGGTTAAACCGGTTGAAAGCTTTAGAGAACAATCGGCA GCGGGCGCATCCTATGAATCGCCGGCTGTGGATGGTAGTCGTCCAGGGGTGTTTTATATCAACACCTATAACCTAAAAGC TCAGCCGAAATGGGGCATGACGACGTTATCATTACATGAGGCCGCGCCTGGGCACCATTTCCAAATCGCCATTAAGCAAG AGCTAACAGGCGTGCCTGAGTTCCAACGTTTCAGTGGCTATACAGCCTTCGAAGAGGGCTGGGCGTTGTATGCTGAATAC TTAGGCATCGAAATGGGGCTCTTTAGCGACCCTTATCAATACTTTGGTAAGCTGTCAGACGAAATGCTGCGTGCGATGCG TTTGGTGGTGGATACGGGATTACATGCCAAAGGCTGGAGCCGCGAGCAAGCGATTCAATATATGAAGGACAATTCGCCCA TGGCCGAGTCGGATATTATTGCTGAAGTTGAACGTTATATGGCGATTCCGGGTCAAGCGCTCTCCTATAAAGTAGGTCAG CTAAAAATCCTAGCCCTACGTGAACGTGCTGAAAAAGCCCTAGGTGATAAGTTTGACCTAAAAGCCTTCCATGATCAGAT CCTCACCTCTGGCTCACTACCTATGGCGGTGATGGAGCAGAAGATCGACCGCTGGATTGCGGCGACTAAGGCTTAA
Upstream 100 bases:
>100_bases TTACGAAATGAGTAGATCATAGATGAATCCCGTAAGCAGACTTTGAACTAAGTATAGGAAGAGTTTGGCTATCACGGACC CAAAAGGAGAAATATAAAAG
Downstream 100 bases:
>100_bases TACCGAGTCAATTATGCTGCGCCGTTATCGATTACAAAATTAATGACGGCGCAGTTTAAGACTTTTTAATTAAACAGAAT GTTTTTATACTCAACATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 611; Mature: 611
Protein sequence:
>611_residues MKLSLLAGTIALVFALQGCSKPETTAAVQEGSAPSAPAQAQTETQTAESKYAALVDAYFKDYLKLEPIYATFVGVNDYNA QFGGDLTEEYLKARHDLNTRYLAQVRAIDLEQLPADLQLSYALFVYDREMALVDETFPSRFMPISQFYSTVITMVQLGSG ESAQPFNTVQDYRNWEQRVNGFIDWIQLAENRMNEGIASKVVLPRVLVERIIPQLDAMLTTDASQSIFYSPINHFPEAFS DQDKAELTASYQAMINERLVPALTGLRDYFKQTYLPKSRATDGWSGLPNGKAWYQHLANSHTTTTMPVDEIHQIGLNEVA RILSEMDKVREQVGFKGDLKAFFASLSSEPQYFYNDRQGLIDGYMVLKDKINQVLPQYFNVMPKADYVVKPVESFREQSA AGASYESPAVDGSRPGVFYINTYNLKAQPKWGMTTLSLHEAAPGHHFQIAIKQELTGVPEFQRFSGYTAFEEGWALYAEY LGIEMGLFSDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWSREQAIQYMKDNSPMAESDIIAEVERYMAIPGQALSYKVGQ LKILALRERAEKALGDKFDLKAFHDQILTSGSLPMAVMEQKIDRWIAATKA
Sequences:
>Translated_611_residues MKLSLLAGTIALVFALQGCSKPETTAAVQEGSAPSAPAQAQTETQTAESKYAALVDAYFKDYLKLEPIYATFVGVNDYNA QFGGDLTEEYLKARHDLNTRYLAQVRAIDLEQLPADLQLSYALFVYDREMALVDETFPSRFMPISQFYSTVITMVQLGSG ESAQPFNTVQDYRNWEQRVNGFIDWIQLAENRMNEGIASKVVLPRVLVERIIPQLDAMLTTDASQSIFYSPINHFPEAFS DQDKAELTASYQAMINERLVPALTGLRDYFKQTYLPKSRATDGWSGLPNGKAWYQHLANSHTTTTMPVDEIHQIGLNEVA RILSEMDKVREQVGFKGDLKAFFASLSSEPQYFYNDRQGLIDGYMVLKDKINQVLPQYFNVMPKADYVVKPVESFREQSA AGASYESPAVDGSRPGVFYINTYNLKAQPKWGMTTLSLHEAAPGHHFQIAIKQELTGVPEFQRFSGYTAFEEGWALYAEY LGIEMGLFSDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWSREQAIQYMKDNSPMAESDIIAEVERYMAIPGQALSYKVGQ LKILALRERAEKALGDKFDLKAFHDQILTSGSLPMAVMEQKIDRWIAATKA >Mature_611_residues MKLSLLAGTIALVFALQGCSKPETTAAVQEGSAPSAPAQAQTETQTAESKYAALVDAYFKDYLKLEPIYATFVGVNDYNA QFGGDLTEEYLKARHDLNTRYLAQVRAIDLEQLPADLQLSYALFVYDREMALVDETFPSRFMPISQFYSTVITMVQLGSG ESAQPFNTVQDYRNWEQRVNGFIDWIQLAENRMNEGIASKVVLPRVLVERIIPQLDAMLTTDASQSIFYSPINHFPEAFS DQDKAELTASYQAMINERLVPALTGLRDYFKQTYLPKSRATDGWSGLPNGKAWYQHLANSHTTTTMPVDEIHQIGLNEVA RILSEMDKVREQVGFKGDLKAFFASLSSEPQYFYNDRQGLIDGYMVLKDKINQVLPQYFNVMPKADYVVKPVESFREQSA AGASYESPAVDGSRPGVFYINTYNLKAQPKWGMTTLSLHEAAPGHHFQIAIKQELTGVPEFQRFSGYTAFEEGWALYAEY LGIEMGLFSDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWSREQAIQYMKDNSPMAESDIIAEVERYMAIPGQALSYKVGQ LKILALRERAEKALGDKFDLKAFHDQILTSGSLPMAVMEQKIDRWIAATKA
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68767; Mature: 68767
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSLLAGTIALVFALQGCSKPETTAAVQEGSAPSAPAQAQTETQTAESKYAALVDAYFK CCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH DYLKLEPIYATFVGVNDYNAQFGGDLTEEYLKARHDLNTRYLAQVRAIDLEQLPADLQLS HHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEE YALFVYDREMALVDETFPSRFMPISQFYSTVITMVQLGSGESAQPFNTVQDYRNWEQRVN EEEEEEECHHHHHHHHCCHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH GFIDWIQLAENRMNEGIASKVVLPRVLVERIIPQLDAMLTTDASQSIFYSPINHFPEAFS HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHC DQDKAELTASYQAMINERLVPALTGLRDYFKQTYLPKSRATDGWSGLPNGKAWYQHLANS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCC HTTTTMPVDEIHQIGLNEVARILSEMDKVREQVGFKGDLKAFFASLSSEPQYFYNDRQGL CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHCCCCHH IDGYMVLKDKINQVLPQYFNVMPKADYVVKPVESFREQSAAGASYESPAVDGSRPGVFYI HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE NTYNLKAQPKWGMTTLSLHEAAPGHHFQIAIKQELTGVPEFQRFSGYTAFEEGWALYAEY EEEEEEECCCCCCEEEEHHCCCCCCEEEEEEHHHCCCCCCHHHHCCCCHHHHHHHHHHHH LGIEMGLFSDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWSREQAIQYMKDNSPMAESDII HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHH AEVERYMAIPGQALSYKVGQLKILALRERAEKALGDKFDLKAFHDQILTSGSLPMAVMEQ HHHHHHHCCCCHHHHEECCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHH KIDRWIAATKA HHHHHHHHCCC >Mature Secondary Structure MKLSLLAGTIALVFALQGCSKPETTAAVQEGSAPSAPAQAQTETQTAESKYAALVDAYFK CCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH DYLKLEPIYATFVGVNDYNAQFGGDLTEEYLKARHDLNTRYLAQVRAIDLEQLPADLQLS HHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEE YALFVYDREMALVDETFPSRFMPISQFYSTVITMVQLGSGESAQPFNTVQDYRNWEQRVN EEEEEEECHHHHHHHHCCHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH GFIDWIQLAENRMNEGIASKVVLPRVLVERIIPQLDAMLTTDASQSIFYSPINHFPEAFS HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHC DQDKAELTASYQAMINERLVPALTGLRDYFKQTYLPKSRATDGWSGLPNGKAWYQHLANS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCC HTTTTMPVDEIHQIGLNEVARILSEMDKVREQVGFKGDLKAFFASLSSEPQYFYNDRQGL CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHCCCCHH IDGYMVLKDKINQVLPQYFNVMPKADYVVKPVESFREQSAAGASYESPAVDGSRPGVFYI HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE NTYNLKAQPKWGMTTLSLHEAAPGHHFQIAIKQELTGVPEFQRFSGYTAFEEGWALYAEY EEEEEEECCCCCCEEEEHHCCCCCCEEEEEEHHHCCCCCCHHHHCCCCHHHHHHHHHHHH LGIEMGLFSDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWSREQAIQYMKDNSPMAESDII HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHH AEVERYMAIPGQALSYKVGQLKILALRERAEKALGDKFDLKAFHDQILTSGSLPMAVMEQ HHHHHHHCCCCHHHHEECCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHH KIDRWIAATKA HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA