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The map label for this gene is yfcA [C]

Identifier: 117921054

GI number: 117921054

Start: 3120105

End: 3120914

Strand: Reverse

Name: yfcA [C]

Synonym: Shewana3_2613

Alternate gene names: 117921054

Gene position: 3120914-3120105 (Counterclockwise)

Preceding gene: 117921056

Following gene: 117921053

Centisome position: 62.77

GC content: 50.86

Gene sequence:

>810_bases
ATGCGAAGCCTTAGCTCCTATTACTCAATAATAACAATCATGGAATTTGAACTGACTCTACAAATTGCGGCATTACTCTT
TGGCGTGGCTATGGTGGCGGGGTTTATCGACTCTATCGCTGGCGGCGGGGGATTGCTGACTATCCCTGCGTTAATGTGGG
CGGGTTTACCGCCGGCGGTGGCACTCGGGACTAACAAATTACAGGCCTGCGGTGGCAGCTTTTTTGCGAGCTTGTACTTT
GTGCGTAAGGGATTGGTCGATTTGAAGGCCGTTAAACTGTCCCTTATCTGTGCCTTTGCGGGCGCCGCCTTAGGCACGAT
TCTGGTGCAGTTGGTCGATGCCAAAGTGCTGGAGTTAGTCTTACCCTTTTTAATCCTCGCGATTGGTTGTTATTTCTTGT
TTTCGAAAAAGATTTCGGAAGATGACCGTCACCAAGTGTTAACGCCTACCGCCTTTGCCTTTACCGCCGCGCTCGGTGTG
GGTTTGTACGATGGCTTTTTTGGCCCTGGCACAGGGAGTTTCTTCGCGCTGGCCTTTGTGACCTTGGCCGGTTTTGGTCT
GGCAAAGGCGACGGCACACGCCAAGGTGTTAAACTTCTCGACCAATATTGCTTCGCTTATCTTCTTTACCTTAGGTGGCA
AAGTGATTTGGGTGCTCGGTTTAGTGATGCTTGCTGGGCAGGCTATCGGCGCCACCTTAGGTTCGCGCTTAGTCGTGACC
AAGGGCACTAAGATCATTAAGCCATTAGTGGTGACTATGTCCTTGGCCATGAGCGTGAAGCTGTTAGCCAGCCAATATCA
CCTGTTTTGA

Upstream 100 bases:

>100_bases
GCGTATCCGAATCGAGTAAATGATAAGGGCATTTAGTGTGAGCTTTGCTCACGCTAGCGCGACAATAACTCCTTTGCGTT
TATAAGGCAAACGCAGTCTA

Downstream 100 bases:

>100_bases
TATAGCCTCTCTCATATTTAACTCTCCCTAGTAAGGCCGATTGTCTATTTGTGCTGCATAGTCCATGAGCACAGTTTTCG
GCCTTATTGCTGCAAATCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MRSLSSYYSIITIMEFELTLQIAALLFGVAMVAGFIDSIAGGGGLLTIPALMWAGLPPAVALGTNKLQACGGSFFASLYF
VRKGLVDLKAVKLSLICAFAGAALGTILVQLVDAKVLELVLPFLILAIGCYFLFSKKISEDDRHQVLTPTAFAFTAALGV
GLYDGFFGPGTGSFFALAFVTLAGFGLAKATAHAKVLNFSTNIASLIFFTLGGKVIWVLGLVMLAGQAIGATLGSRLVVT
KGTKIIKPLVVTMSLAMSVKLLASQYHLF

Sequences:

>Translated_269_residues
MRSLSSYYSIITIMEFELTLQIAALLFGVAMVAGFIDSIAGGGGLLTIPALMWAGLPPAVALGTNKLQACGGSFFASLYF
VRKGLVDLKAVKLSLICAFAGAALGTILVQLVDAKVLELVLPFLILAIGCYFLFSKKISEDDRHQVLTPTAFAFTAALGV
GLYDGFFGPGTGSFFALAFVTLAGFGLAKATAHAKVLNFSTNIASLIFFTLGGKVIWVLGLVMLAGQAIGATLGSRLVVT
KGTKIIKPLVVTMSLAMSVKLLASQYHLF
>Mature_269_residues
MRSLSSYYSIITIMEFELTLQIAALLFGVAMVAGFIDSIAGGGGLLTIPALMWAGLPPAVALGTNKLQACGGSFFASLYF
VRKGLVDLKAVKLSLICAFAGAALGTILVQLVDAKVLELVLPFLILAIGCYFLFSKKISEDDRHQVLTPTAFAFTAALGV
GLYDGFFGPGTGSFFALAFVTLAGFGLAKATAHAKVLNFSTNIASLIFFTLGGKVIWVLGLVMLAGQAIGATLGSRLVVT
KGTKIIKPLVVTMSLAMSVKLLASQYHLF

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=242, Percent_Identity=58.6776859504132, Blast_Score=260, Evalue=5e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 28202; Mature: 28202

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLSSYYSIITIMEFELTLQIAALLFGVAMVAGFIDSIAGGGGLLTIPALMWAGLPPAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHH
ALGTNKLQACGGSFFASLYFVRKGLVDLKAVKLSLICAFAGAALGTILVQLVDAKVLELV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPFLILAIGCYFLFSKKISEDDRHQVLTPTAFAFTAALGVGLYDGFFGPGTGSFFALAFV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
TLAGFGLAKATAHAKVLNFSTNIASLIFFTLGGKVIWVLGLVMLAGQAIGATLGSRLVVT
HHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEE
KGTKIIKPLVVTMSLAMSVKLLASQYHLF
CCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRSLSSYYSIITIMEFELTLQIAALLFGVAMVAGFIDSIAGGGGLLTIPALMWAGLPPAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHH
ALGTNKLQACGGSFFASLYFVRKGLVDLKAVKLSLICAFAGAALGTILVQLVDAKVLELV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPFLILAIGCYFLFSKKISEDDRHQVLTPTAFAFTAALGVGLYDGFFGPGTGSFFALAFV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
TLAGFGLAKATAHAKVLNFSTNIASLIFFTLGGKVIWVLGLVMLAGQAIGATLGSRLVVT
HHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEE
KGTKIIKPLVVTMSLAMSVKLLASQYHLF
CCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]