| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921039
Identifier: 117921039
GI number: 117921039
Start: 3102604
End: 3103050
Strand: Direct
Name: 117921039
Synonym: Shewana3_2598
Alternate gene names: NA
Gene position: 3102604-3103050 (Clockwise)
Preceding gene: 117921037
Following gene: 117921047
Centisome position: 62.4
GC content: 45.19
Gene sequence:
>447_bases GTGAACATTAATGGATTAAATACTACTGCAAACAGCGGCGCCTTTAAGTCAGTGTCCAGTGCCTATATCACCACCACGCC TTCATCCAACGGCTCAACAGAGACCATAGACTCGTCACCTCAAGAAACGGTCAATATCTCCAATGCGGGAAGACAAGCCC TCGCCACTGAAGTAGGTTCAGCTTTAAGGGGGCAAGCAGCAGAAAAATTGCAGCAAACGGAAACAACTGATACCGAAGAG CCCACATCGATTATTGATGAGCAAATTAAACGCATAAAGGAACAAATCAAAGCCTTGCAGGAAATGCTCACGAAACTCGA AGGAGATGATTCTGAAGCTGCGGCTCAACAACGTAAGCTATTGCAGGAGCAAATTATGCAACTCGGTAATCAAATTGCCG TGTTAATGGATAAGAAAATGCGGGATGCGCAAAAATCTGCAGGCTAA
Upstream 100 bases:
>100_bases TCCATCAGCCGATAGCTCGATAAAGCACACTTGTCACTCACATTGGTTACGCTATTGAACATAGTTGAGCGACCACATTG AAGTATTAAAGGAATCTATC
Downstream 100 bases:
>100_bases GACTTAGCGCCAATCTGCGTTAGTCTTTGTATATCAACACGTCATGAGCTTGGGTTGAAACAGATTAAATAGGAAAACTA AATAATAAACGCCAGATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MNINGLNTTANSGAFKSVSSAYITTTPSSNGSTETIDSSPQETVNISNAGRQALATEVGSALRGQAAEKLQQTETTDTEE PTSIIDEQIKRIKEQIKALQEMLTKLEGDDSEAAAQQRKLLQEQIMQLGNQIAVLMDKKMRDAQKSAG
Sequences:
>Translated_148_residues MNINGLNTTANSGAFKSVSSAYITTTPSSNGSTETIDSSPQETVNISNAGRQALATEVGSALRGQAAEKLQQTETTDTEE PTSIIDEQIKRIKEQIKALQEMLTKLEGDDSEAAAQQRKLLQEQIMQLGNQIAVLMDKKMRDAQKSAG >Mature_148_residues MNINGLNTTANSGAFKSVSSAYITTTPSSNGSTETIDSSPQETVNISNAGRQALATEVGSALRGQAAEKLQQTETTDTEE PTSIIDEQIKRIKEQIKALQEMLTKLEGDDSEAAAQQRKLLQEQIMQLGNQIAVLMDKKMRDAQKSAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15930; Mature: 15930
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNINGLNTTANSGAFKSVSSAYITTTPSSNGSTETIDSSPQETVNISNAGRQALATEVGS CCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHH ALRGQAAEKLQQTETTDTEEPTSIIDEQIKRIKEQIKALQEMLTKLEGDDSEAAAQQRKL HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LQEQIMQLGNQIAVLMDKKMRDAQKSAG HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNINGLNTTANSGAFKSVSSAYITTTPSSNGSTETIDSSPQETVNISNAGRQALATEVGS CCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHH ALRGQAAEKLQQTETTDTEEPTSIIDEQIKRIKEQIKALQEMLTKLEGDDSEAAAQQRKL HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LQEQIMQLGNQIAVLMDKKMRDAQKSAG HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA