BacMap

Definition	Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession	NC_008577
Length	4,972,204

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The map label for this gene is srmB [H]

Identifier: 117921047

GI number: 117921047

Start: 3110619

End: 3111968

Strand: Direct

Name: srmB [H]

Synonym: Shewana3_2606

Alternate gene names: 117921047

Gene position: 3110619-3111968 (Clockwise)

Preceding gene: 117921039

Following gene: 117921048

Centisome position: 62.56

GC content: 49.78

Gene sequence:

>1350_bases
TTGCAGTTTACTGATTTTTCTCTGGACCAGCGTCTGTTACAAAGCTTAAAGCATATGGGGATTGCGACCCCAACCGCCAT
CCAGGAACAAGCACTGCCTATCGCATTGGCAGGTAAAGATTTAATGGCGTCATCAAAAACAGGATCGGGTAAGACCTTAG
CGTTTTTGTTGCCAGCGATGCAAAGGGTTATCTCCACCCGCGCCTTAACCAAGCGCGATCCTAGAGTACTGATTTTATTA
CCAACCCGCGAATTGGCCCACCAAGTGTATAGCCAGCTACGTTTGCTAGTTGCCAACACTCAGTACAAAGCCATTAGCGT
GTTGGGCGGTGAGAACTTTAACGATCAAGCCAAGGCGCTGGCAAAAGAGCCGCATTTTATCGTGGCAACGCCGGGACGTA
TCGCCGATCATTTAGAGCAAAAAAACCTCTTCCTCAATGGATTAGAACTGCTTGTCCTCGATGAAGCCGACCGTATGCTG
GATCTGGGTTTTGCGCCGCAATTAAAAGCCATTAACGCCGCTGCAGATCATAAGCGCCGTCAAACCTTAATGTTTTCGGC
CACCTTAGATCACAGTGAAATCAATGAGATTGCCGCCGCATTACTCAAAAATCCATCACATGTGGCGATTGGCGCTGCCC
ACACTGAGCATCAGGACATTACCCAACGGATTTATCTGTGTGATCATTTAGATCACAAAGAAGCCCTGCTCACGCGTTTG
CTCAGTGACGAAACCCACAAGCAAGTGATTATTTTTACCGCCACCCGCGCCGATACCGAGCGCTTAGCCAGCAAACTCTC
GGCGCAAGGTTTTGCCACCGCGGCGTTAAGCGGCGAGCTGAAGCAGGCGGCCCGTAATCAAATCATGGATCAATTTGCCC
GCGGTCAGCAGCAGATTCTGGTGACCACAGATGTGGCATCCCGTGGCTTAGACTTACTCAATGTCTCCCTCGTCATTAAC
TTCGACATGCCCAAATTTGCCGAAGAATATGTCCACCGTATCGGTCGTACCGGCCGCGCGGGCGCAAAAGGTGATGCAAT
CTCCCTCGTTGGCCCTAAGGATTGGGATAACTTTAAGAAAGTACAACTCTTCCTCAGAAAGACCTTTGAGATCAGTGTCA
TTCAGGGCCTCGAAGCTAAATTTAGTGGATTAAAAGACAAGCCAAAGACTGCCGCAACTAAAGCGGTCACTAAGGCTGGT
ACAAAAACCAAAGCGAAAACCAAATCAAAAACGGTTAAAACGGCCGCCTCCCGTGACAAACGCTTTATCACTGGGGTTGA
TGTGGGTGATGCGCCCATGCGTAAAAAACCTGCGGCGCCTCTGCTGCAGGATCATGACGACGAGCGTTAA

Upstream 100 bases:

>100_bases
GCGATTTAACGGATTCAGTAAGATAATGACCAATCAAGATAGCTGAGCATAGTGATTTAAGGCTATAATCTGCCCTCACT
CAGATTTAGGGGATATACCT

Downstream 100 bases:

>100_bases
TGATTTACTCGCGAGAGTCCATAGTGCAGACTCTCGACATTACGGGTGGGAATATGCTCCTGCCATATGTAAGAAATGTT
GATATTTAAAGGTGTAACAT

Product: DEAD/DEAH box helicase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MQFTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPAMQRVISTRALTKRDPRVLILL
PTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKALAKEPHFIVATPGRIADHLEQKNLFLNGLELLVLDEADRML
DLGFAPQLKAINAAADHKRRQTLMFSATLDHSEINEIAAALLKNPSHVAIGAAHTEHQDITQRIYLCDHLDHKEALLTRL
LSDETHKQVIIFTATRADTERLASKLSAQGFATAALSGELKQAARNQIMDQFARGQQQILVTTDVASRGLDLLNVSLVIN
FDMPKFAEEYVHRIGRTGRAGAKGDAISLVGPKDWDNFKKVQLFLRKTFEISVIQGLEAKFSGLKDKPKTAATKAVTKAG
TKTKAKTKSKTVKTAASRDKRFITGVDVGDAPMRKKPAAPLLQDHDDER

Sequences:

>Translated_449_residues
MQFTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPAMQRVISTRALTKRDPRVLILL
PTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKALAKEPHFIVATPGRIADHLEQKNLFLNGLELLVLDEADRML
DLGFAPQLKAINAAADHKRRQTLMFSATLDHSEINEIAAALLKNPSHVAIGAAHTEHQDITQRIYLCDHLDHKEALLTRL
LSDETHKQVIIFTATRADTERLASKLSAQGFATAALSGELKQAARNQIMDQFARGQQQILVTTDVASRGLDLLNVSLVIN
FDMPKFAEEYVHRIGRTGRAGAKGDAISLVGPKDWDNFKKVQLFLRKTFEISVIQGLEAKFSGLKDKPKTAATKAVTKAG
TKTKAKTKSKTVKTAASRDKRFITGVDVGDAPMRKKPAAPLLQDHDDER
>Mature_449_residues
MQFTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPAMQRVISTRALTKRDPRVLILL
PTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKALAKEPHFIVATPGRIADHLEQKNLFLNGLELLVLDEADRML
DLGFAPQLKAINAAADHKRRQTLMFSATLDHSEINEIAAALLKNPSHVAIGAAHTEHQDITQRIYLCDHLDHKEALLTRL
LSDETHKQVIIFTATRADTERLASKLSAQGFATAALSGELKQAARNQIMDQFARGQQQILVTTDVASRGLDLLNVSLVIN
FDMPKFAEEYVHRIGRTGRAGAKGDAISLVGPKDWDNFKKVQLFLRKTFEISVIQGLEAKFSGLKDKPKTAATKAVTKAG
TKTKAKTKSKTVKTAASRDKRFITGVDVGDAPMRKKPAAPLLQDHDDER

Specific function: RNA-dependent ATPase activity. Probably interacts with 23S ribosomal RNA [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI45446747, Length=360, Percent_Identity=38.0555555555556, Blast_Score=249, Evalue=3e-66,
Organism=Homo sapiens, GI45446743, Length=360, Percent_Identity=38.0555555555556, Blast_Score=249, Evalue=3e-66,
Organism=Homo sapiens, GI169881239, Length=370, Percent_Identity=36.4864864864865, Blast_Score=238, Evalue=8e-63,
Organism=Homo sapiens, GI13514809, Length=370, Percent_Identity=36.4864864864865, Blast_Score=238, Evalue=8e-63,
Organism=Homo sapiens, GI262118318, Length=358, Percent_Identity=36.8715083798883, Blast_Score=237, Evalue=1e-62,
Organism=Homo sapiens, GI224593278, Length=367, Percent_Identity=38.4196185286104, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI262231852, Length=358, Percent_Identity=36.8715083798883, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI13518015, Length=358, Percent_Identity=36.8715083798883, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI216548263, Length=358, Percent_Identity=36.8715083798883, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI301171475, Length=369, Percent_Identity=36.8563685636856, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI87196351, Length=369, Percent_Identity=36.8563685636856, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI301171467, Length=369, Percent_Identity=36.8563685636856, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI20149629, Length=369, Percent_Identity=36.0433604336043, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI4758138, Length=368, Percent_Identity=36.6847826086957, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI41327771, Length=382, Percent_Identity=34.8167539267016, Blast_Score=230, Evalue=2e-60,
Organism=Homo sapiens, GI148613856, Length=358, Percent_Identity=36.8715083798883, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI38201710, Length=358, Percent_Identity=36.8715083798883, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI222352149, Length=359, Percent_Identity=38.1615598885794, Blast_Score=226, Evalue=4e-59,
Organism=Homo sapiens, GI31542656, Length=363, Percent_Identity=38.2920110192837, Blast_Score=221, Evalue=8e-58,
Organism=Homo sapiens, GI41327773, Length=455, Percent_Identity=32.967032967033, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI13514831, Length=361, Percent_Identity=35.1800554016621, Blast_Score=211, Evalue=8e-55,
Organism=Homo sapiens, GI188035877, Length=372, Percent_Identity=35.4838709677419, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI21071032, Length=361, Percent_Identity=36.2880886426593, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI164664518, Length=363, Percent_Identity=34.7107438016529, Blast_Score=208, Evalue=8e-54,
Organism=Homo sapiens, GI55749865, Length=348, Percent_Identity=34.7701149425287, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI7661920, Length=352, Percent_Identity=33.2386363636364, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI41327776, Length=369, Percent_Identity=33.3333333333333, Blast_Score=199, Evalue=3e-51,
Organism=Homo sapiens, GI38327634, Length=351, Percent_Identity=34.1880341880342, Blast_Score=199, Evalue=3e-51,
Organism=Homo sapiens, GI51094101, Length=374, Percent_Identity=35.2941176470588, Blast_Score=199, Evalue=3e-51,
Organism=Homo sapiens, GI164419743, Length=374, Percent_Identity=35.2941176470588, Blast_Score=199, Evalue=4e-51,
Organism=Homo sapiens, GI4503529, Length=372, Percent_Identity=33.3333333333333, Blast_Score=186, Evalue=3e-47,
Organism=Homo sapiens, GI83700235, Length=369, Percent_Identity=33.0623306233062, Blast_Score=185, Evalue=9e-47,
Organism=Homo sapiens, GI9506931, Length=449, Percent_Identity=29.8440979955457, Blast_Score=180, Evalue=3e-45,
Organism=Homo sapiens, GI13129006, Length=370, Percent_Identity=31.6216216216216, Blast_Score=180, Evalue=3e-45,
Organism=Homo sapiens, GI50659095, Length=359, Percent_Identity=34.2618384401114, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI38569503, Length=360, Percent_Identity=32.2222222222222, Blast_Score=178, Evalue=9e-45,
Organism=Homo sapiens, GI38569505, Length=360, Percent_Identity=32.2222222222222, Blast_Score=178, Evalue=9e-45,
Organism=Homo sapiens, GI8922886, Length=389, Percent_Identity=33.4190231362468, Blast_Score=176, Evalue=6e-44,
Organism=Homo sapiens, GI41327779, Length=370, Percent_Identity=32.7027027027027, Blast_Score=173, Evalue=3e-43,
Organism=Homo sapiens, GI6005743, Length=389, Percent_Identity=32.9048843187661, Blast_Score=172, Evalue=9e-43,
Organism=Homo sapiens, GI17505907, Length=408, Percent_Identity=29.656862745098, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI164419732, Length=357, Percent_Identity=33.8935574229692, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI21040371, Length=374, Percent_Identity=31.0160427807487, Blast_Score=165, Evalue=6e-41,
Organism=Homo sapiens, GI62241022, Length=373, Percent_Identity=32.9758713136729, Blast_Score=163, Evalue=3e-40,
Organism=Homo sapiens, GI4758112, Length=376, Percent_Identity=30.5851063829787, Blast_Score=163, Evalue=3e-40,
Organism=Homo sapiens, GI18375623, Length=376, Percent_Identity=30.5851063829787, Blast_Score=163, Evalue=3e-40,
Organism=Homo sapiens, GI154759257, Length=364, Percent_Identity=31.5934065934066, Blast_Score=155, Evalue=1e-37,
Organism=Homo sapiens, GI256223453, Length=364, Percent_Identity=29.3956043956044, Blast_Score=153, Evalue=3e-37,
Organism=Homo sapiens, GI62241024, Length=351, Percent_Identity=31.9088319088319, Blast_Score=147, Evalue=3e-35,
Organism=Homo sapiens, GI9966805, Length=347, Percent_Identity=30.835734870317, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI256773275, Length=406, Percent_Identity=29.064039408867, Blast_Score=133, Evalue=4e-31,
Organism=Homo sapiens, GI4826686, Length=333, Percent_Identity=28.2282282282282, Blast_Score=132, Evalue=8e-31,
Organism=Homo sapiens, GI20336298, Length=215, Percent_Identity=34.4186046511628, Blast_Score=122, Evalue=8e-28,
Organism=Escherichia coli, GI1788930, Length=382, Percent_Identity=39.7905759162304, Blast_Score=257, Evalue=1e-69,
Organism=Escherichia coli, GI1787016, Length=390, Percent_Identity=37.9487179487179, Blast_Score=254, Evalue=6e-69,
Organism=Escherichia coli, GI87082221, Length=368, Percent_Identity=37.2282608695652, Blast_Score=236, Evalue=3e-63,
Organism=Escherichia coli, GI1790214, Length=424, Percent_Identity=33.2547169811321, Blast_Score=234, Evalue=1e-62,
Organism=Escherichia coli, GI1787605, Length=345, Percent_Identity=40.5797101449275, Blast_Score=222, Evalue=4e-59,
Organism=Escherichia coli, GI48994977, Length=343, Percent_Identity=26.2390670553936, Blast_Score=85, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17555296, Length=372, Percent_Identity=37.3655913978495, Blast_Score=241, Evalue=6e-64,
Organism=Caenorhabditis elegans, GI17510307, Length=368, Percent_Identity=36.9565217391304, Blast_Score=237, Evalue=8e-63,
Organism=Caenorhabditis elegans, GI17510309, Length=368, Percent_Identity=36.9565217391304, Blast_Score=237, Evalue=9e-63,
Organism=Caenorhabditis elegans, GI71995514, Length=368, Percent_Identity=36.9565217391304, Blast_Score=237, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI32565321, Length=372, Percent_Identity=36.8279569892473, Blast_Score=236, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI71995718, Length=369, Percent_Identity=37.940379403794, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI17552642, Length=357, Percent_Identity=39.2156862745098, Blast_Score=231, Evalue=4e-61,
Organism=Caenorhabditis elegans, GI17510559, Length=390, Percent_Identity=35.3846153846154, Blast_Score=223, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI115533224, Length=333, Percent_Identity=39.3393393393393, Blast_Score=222, Evalue=4e-58,
Organism=Caenorhabditis elegans, GI17507945, Length=364, Percent_Identity=36.5384615384615, Blast_Score=219, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI17507877, Length=369, Percent_Identity=36.5853658536585, Blast_Score=214, Evalue=7e-56,
Organism=Caenorhabditis elegans, GI71987143, Length=370, Percent_Identity=32.4324324324324, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI17507881, Length=369, Percent_Identity=35.5013550135501, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI86570094, Length=357, Percent_Identity=36.1344537815126, Blast_Score=209, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI71995724, Length=352, Percent_Identity=34.6590909090909, Blast_Score=208, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI17507121, Length=352, Percent_Identity=34.6590909090909, Blast_Score=208, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI17507879, Length=373, Percent_Identity=36.1930294906166, Blast_Score=205, Evalue=5e-53,
Organism=Caenorhabditis elegans, GI115532548, Length=410, Percent_Identity=32.9268292682927, Blast_Score=198, Evalue=6e-51,
Organism=Caenorhabditis elegans, GI115532546, Length=381, Percent_Identity=33.0708661417323, Blast_Score=198, Evalue=6e-51,
Organism=Caenorhabditis elegans, GI17537549, Length=376, Percent_Identity=33.5106382978723, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI71999646, Length=374, Percent_Identity=33.1550802139037, Blast_Score=191, Evalue=6e-49,
Organism=Caenorhabditis elegans, GI71999644, Length=374, Percent_Identity=33.1550802139037, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17509811, Length=358, Percent_Identity=32.122905027933, Blast_Score=188, Evalue=4e-48,
Organism=Caenorhabditis elegans, GI17508543, Length=382, Percent_Identity=31.413612565445, Blast_Score=187, Evalue=8e-48,
Organism=Caenorhabditis elegans, GI17552114, Length=372, Percent_Identity=31.989247311828, Blast_Score=186, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI17505370, Length=357, Percent_Identity=34.453781512605, Blast_Score=185, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI71990816, Length=366, Percent_Identity=31.4207650273224, Blast_Score=173, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI17507641, Length=388, Percent_Identity=30.4123711340206, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI32564046, Length=372, Percent_Identity=30.6451612903226, Blast_Score=159, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI71982858, Length=380, Percent_Identity=30, Blast_Score=154, Evalue=7e-38,
Organism=Caenorhabditis elegans, GI17536099, Length=397, Percent_Identity=31.2342569269521, Blast_Score=154, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17536101, Length=397, Percent_Identity=31.2342569269521, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI193206561, Length=349, Percent_Identity=28.3667621776504, Blast_Score=151, Evalue=5e-37,
Organism=Caenorhabditis elegans, GI25148203, Length=430, Percent_Identity=26.5116279069767, Blast_Score=151, Evalue=6e-37,
Organism=Caenorhabditis elegans, GI17536103, Length=385, Percent_Identity=31.6883116883117, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI193208216, Length=387, Percent_Identity=32.8165374677003, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI17556951, Length=339, Percent_Identity=30.6784660766962, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17553716, Length=355, Percent_Identity=28.4507042253521, Blast_Score=130, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI71997889, Length=372, Percent_Identity=28.494623655914, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI25148291, Length=328, Percent_Identity=25.9146341463415, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17557982, Length=388, Percent_Identity=24.4845360824742, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI71987152, Length=105, Percent_Identity=40.9523809523809, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17565430, Length=386, Percent_Identity=23.0569948186528, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI71982862, Length=191, Percent_Identity=29.3193717277487, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17566630, Length=340, Percent_Identity=21.4705882352941, Blast_Score=74, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6321856, Length=367, Percent_Identity=38.6920980926431, Blast_Score=249, Evalue=9e-67,
Organism=Saccharomyces cerevisiae, GI6325138, Length=363, Percent_Identity=38.8429752066116, Blast_Score=242, Evalue=1e-64,
Organism=Saccharomyces cerevisiae, GI6324778, Length=362, Percent_Identity=37.8453038674033, Blast_Score=236, Evalue=5e-63,
Organism=Saccharomyces cerevisiae, GI6324217, Length=353, Percent_Identity=37.6770538243626, Blast_Score=236, Evalue=7e-63,
Organism=Saccharomyces cerevisiae, GI6321360, Length=355, Percent_Identity=38.8732394366197, Blast_Score=233, Evalue=6e-62,
Organism=Saccharomyces cerevisiae, GI6323021, Length=365, Percent_Identity=37.8082191780822, Blast_Score=225, Evalue=9e-60,
Organism=Saccharomyces cerevisiae, GI6320224, Length=365, Percent_Identity=32.6027397260274, Blast_Score=210, Evalue=4e-55,
Organism=Saccharomyces cerevisiae, GI6323947, Length=355, Percent_Identity=34.0845070422535, Blast_Score=204, Evalue=3e-53,
Organism=Saccharomyces cerevisiae, GI6320041, Length=360, Percent_Identity=35, Blast_Score=202, Evalue=9e-53,
Organism=Saccharomyces cerevisiae, GI6321963, Length=425, Percent_Identity=35.2941176470588, Blast_Score=200, Evalue=3e-52,
Organism=Saccharomyces cerevisiae, GI6320449, Length=356, Percent_Identity=34.8314606741573, Blast_Score=193, Evalue=5e-50,
Organism=Saccharomyces cerevisiae, GI6320173, Length=421, Percent_Identity=31.5914489311164, Blast_Score=192, Evalue=8e-50,
Organism=Saccharomyces cerevisiae, GI6322912, Length=370, Percent_Identity=33.2432432432432, Blast_Score=192, Evalue=1e-49,
Organism=Saccharomyces cerevisiae, GI6322323, Length=370, Percent_Identity=33.2432432432432, Blast_Score=192, Evalue=1e-49,
Organism=Saccharomyces cerevisiae, GI6322427, Length=368, Percent_Identity=32.8804347826087, Blast_Score=191, Evalue=3e-49,
Organism=Saccharomyces cerevisiae, GI6319714, Length=359, Percent_Identity=33.1476323119777, Blast_Score=187, Evalue=3e-48,
Organism=Saccharomyces cerevisiae, GI6324620, Length=367, Percent_Identity=32.9700272479564, Blast_Score=171, Evalue=2e-43,
Organism=Saccharomyces cerevisiae, GI6321267, Length=358, Percent_Identity=32.4022346368715, Blast_Score=170, Evalue=5e-43,
Organism=Saccharomyces cerevisiae, GI6320119, Length=373, Percent_Identity=32.171581769437, Blast_Score=169, Evalue=7e-43,
Organism=Saccharomyces cerevisiae, GI6323306, Length=412, Percent_Identity=30.0970873786408, Blast_Score=169, Evalue=8e-43,
Organism=Saccharomyces cerevisiae, GI6320400, Length=369, Percent_Identity=28.7262872628726, Blast_Score=166, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6321111, Length=367, Percent_Identity=29.9727520435967, Blast_Score=158, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6319618, Length=419, Percent_Identity=26.7303102625298, Blast_Score=154, Evalue=2e-38,
Organism=Saccharomyces cerevisiae, GI6324366, Length=349, Percent_Identity=28.6532951289398, Blast_Score=129, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6322876, Length=181, Percent_Identity=37.0165745856354, Blast_Score=107, Evalue=5e-24,
Organism=Drosophila melanogaster, GI24662330, Length=356, Percent_Identity=39.6067415730337, Blast_Score=252, Evalue=4e-67,
Organism=Drosophila melanogaster, GI28574962, Length=354, Percent_Identity=38.9830508474576, Blast_Score=246, Evalue=3e-65,
Organism=Drosophila melanogaster, GI24584399, Length=354, Percent_Identity=38.7005649717514, Blast_Score=242, Evalue=4e-64,
Organism=Drosophila melanogaster, GI24644479, Length=354, Percent_Identity=37.2881355932203, Blast_Score=238, Evalue=7e-63,
Organism=Drosophila melanogaster, GI24644483, Length=354, Percent_Identity=37.2881355932203, Blast_Score=238, Evalue=8e-63,
Organism=Drosophila melanogaster, GI281361218, Length=354, Percent_Identity=37.2881355932203, Blast_Score=238, Evalue=8e-63,
Organism=Drosophila melanogaster, GI24644481, Length=354, Percent_Identity=37.2881355932203, Blast_Score=238, Evalue=8e-63,
Organism=Drosophila melanogaster, GI24644487, Length=354, Percent_Identity=37.2881355932203, Blast_Score=238, Evalue=9e-63,
Organism=Drosophila melanogaster, GI45551833, Length=354, Percent_Identity=37.2881355932203, Blast_Score=238, Evalue=9e-63,
Organism=Drosophila melanogaster, GI24644485, Length=354, Percent_Identity=37.2881355932203, Blast_Score=238, Evalue=9e-63,
Organism=Drosophila melanogaster, GI24585582, Length=370, Percent_Identity=37.027027027027, Blast_Score=237, Evalue=1e-62,
Organism=Drosophila melanogaster, GI18857967, Length=376, Percent_Identity=35.6382978723404, Blast_Score=235, Evalue=4e-62,
Organism=Drosophila melanogaster, GI21355075, Length=385, Percent_Identity=36.8831168831169, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI21356161, Length=356, Percent_Identity=36.7977528089888, Blast_Score=228, Evalue=7e-60,
Organism=Drosophila melanogaster, GI17985987, Length=372, Percent_Identity=37.0967741935484, Blast_Score=226, Evalue=3e-59,
Organism=Drosophila melanogaster, GI24584994, Length=381, Percent_Identity=34.6456692913386, Blast_Score=224, Evalue=8e-59,
Organism=Drosophila melanogaster, GI24642151, Length=357, Percent_Identity=33.6134453781513, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI17977678, Length=360, Percent_Identity=36.3888888888889, Blast_Score=212, Evalue=4e-55,
Organism=Drosophila melanogaster, GI28575014, Length=377, Percent_Identity=34.4827586206897, Blast_Score=205, Evalue=5e-53,
Organism=Drosophila melanogaster, GI24645031, Length=352, Percent_Identity=33.2386363636364, Blast_Score=204, Evalue=1e-52,
Organism=Drosophila melanogaster, GI281365720, Length=315, Percent_Identity=37.1428571428571, Blast_Score=201, Evalue=1e-51,
Organism=Drosophila melanogaster, GI17136814, Length=361, Percent_Identity=35.1800554016621, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI28571808, Length=346, Percent_Identity=34.393063583815, Blast_Score=196, Evalue=4e-50,
Organism=Drosophila melanogaster, GI28571809, Length=346, Percent_Identity=34.393063583815, Blast_Score=196, Evalue=4e-50,
Organism=Drosophila melanogaster, GI24583281, Length=361, Percent_Identity=33.2409972299169, Blast_Score=192, Evalue=3e-49,
Organism=Drosophila melanogaster, GI24583279, Length=361, Percent_Identity=33.2409972299169, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI24642822, Length=375, Percent_Identity=30.1333333333333, Blast_Score=188, Evalue=5e-48,
Organism=Drosophila melanogaster, GI24582080, Length=371, Percent_Identity=32.8840970350404, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24582078, Length=371, Percent_Identity=32.8840970350404, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI17136248, Length=371, Percent_Identity=32.8840970350404, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24582075, Length=371, Percent_Identity=32.8840970350404, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24666101, Length=370, Percent_Identity=32.7027027027027, Blast_Score=178, Evalue=6e-45,
Organism=Drosophila melanogaster, GI21355559, Length=365, Percent_Identity=32.8767123287671, Blast_Score=166, Evalue=2e-41,
Organism=Drosophila melanogaster, GI17647335, Length=360, Percent_Identity=31.9444444444444, Blast_Score=164, Evalue=2e-40,
Organism=Drosophila melanogaster, GI24581954, Length=357, Percent_Identity=31.6526610644258, Blast_Score=154, Evalue=1e-37,
Organism=Drosophila melanogaster, GI24581952, Length=357, Percent_Identity=31.6526610644258, Blast_Score=154, Evalue=1e-37,
Organism=Drosophila melanogaster, GI24581956, Length=357, Percent_Identity=31.6526610644258, Blast_Score=154, Evalue=1e-37,
Organism=Drosophila melanogaster, GI20130173, Length=459, Percent_Identity=27.8867102396514, Blast_Score=152, Evalue=5e-37,
Organism=Drosophila melanogaster, GI17136666, Length=494, Percent_Identity=27.9352226720648, Blast_Score=148, Evalue=6e-36,
Organism=Drosophila melanogaster, GI24643725, Length=388, Percent_Identity=28.8659793814433, Blast_Score=143, Evalue=2e-34,
Organism=Drosophila melanogaster, GI19920478, Length=366, Percent_Identity=29.2349726775956, Blast_Score=138, Evalue=7e-33,
Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=28.5276073619632, Blast_Score=133, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24640164, Length=350, Percent_Identity=28, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI28571338, Length=204, Percent_Identity=36.7647058823529, Blast_Score=118, Evalue=9e-27,
Organism=Drosophila melanogaster, GI18859659, Length=204, Percent_Identity=36.7647058823529, Blast_Score=118, Evalue=9e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 49385; Mature: 49385

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPAM
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEECCHHHCCCCCCCCCHHHHHHHHH
QRVISTRALTKRDPRVLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKAL
HHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH
AKEPHFIVATPGRIADHLEQKNLFLNGLELLVLDEADRMLDLGFAPQLKAINAAADHKRR
HCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHH
QTLMFSATLDHSEINEIAAALLKNPSHVAIGAAHTEHQDITQRIYLCDHLDHKEALLTRL
HEEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHH
LSDETHKQVIIFTATRADTERLASKLSAQGFATAALSGELKQAARNQIMDQFARGQQQIL
HCCCCCCEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
VTTDVASRGLDLLNVSLVINFDMPKFAEEYVHRIGRTGRAGAKGDAISLVGPKDWDNFKK
EEECHHHCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHH
VQLFLRKTFEISVIQGLEAKFSGLKDKPKTAATKAVTKAGTKTKAKTKSKTVKTAASRDK
HHHHHHHHHHEEEHHCCHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
RFITGVDVGDAPMRKKPAAPLLQDHDDER
EEEEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQFTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPAM
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEECCHHHCCCCCCCCCHHHHHHHHH
QRVISTRALTKRDPRVLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKAL
HHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH
AKEPHFIVATPGRIADHLEQKNLFLNGLELLVLDEADRMLDLGFAPQLKAINAAADHKRR
HCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHH
QTLMFSATLDHSEINEIAAALLKNPSHVAIGAAHTEHQDITQRIYLCDHLDHKEALLTRL
HEEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHH
LSDETHKQVIIFTATRADTERLASKLSAQGFATAALSGELKQAARNQIMDQFARGQQQIL
HCCCCCCEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
VTTDVASRGLDLLNVSLVINFDMPKFAEEYVHRIGRTGRAGAKGDAISLVGPKDWDNFKK
EEECHHHCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHH
VQLFLRKTFEISVIQGLEAKFSGLKDKPKTAATKAVTKAGTKTKAKTKSKTVKTAASRDK
HHHHHHHHHHEEEHHCCHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
RFITGVDVGDAPMRKKPAAPLLQDHDDER
EEEEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]