Click here to switch to the map view.

The map label for this gene is 117921021

Identifier: 117921021

GI number: 117921021

Start: 3084815

End: 3085504

Strand: Reverse

Name: 117921021

Synonym: Shewana3_2580

Alternate gene names: NA

Gene position: 3085504-3084815 (Counterclockwise)

Preceding gene: 117921023

Following gene: 117921017

Centisome position: 62.06

GC content: 46.23

Gene sequence:

>690_bases
ATGTTGGACTTTTGGGCGAATCGTTTGGCACAAATCGAATGGGGTATCAGCCCATTGCAGTGCCTGAGTCTGTTGCTACT
GGCGCTGTGGATTTATGCCATTTGGCCTAAGGAGGAGCTACAGCAAGTACTGAAGGACAAAGGCTTACAATGGCGGCTGT
TATTGACCCTGATTGCGGTGAATACCCTGTGGTTGCTCAATGCCAGTATTCAAGTGGGATTGCATTTACACTTCTTAGGC
ATAGTCACTTGCCTACTGATGTTTGGTTGGCGTTTAGCCACGGTCGCCTTGCTGCTACCGAGTGCATTTTTCAGTATGTT
TGTGTTAAAGCAACCCGCCGAGTTTGGGGCTTTTAGCTTGTTTGCTATCGCTATTCCGCTGTTCTGTGCCTTTATCCTCT
ACAGCCGTAGTTATCATTTGTTTCCTAAGCATATTTTTGTGTTTATTTTTGTCGGCGCCTTTATTAACGCAGGATTGTCG
ACGGTTTTTCATCAATTCAGTTGGGCATTCTGGCTGTGGTTGTCAATGGATTATGACTGGGGCGTGTTGATTGATAACTA
TCTGATGTTAATCCCGCTATTAGCGTTCCCTGAAGCGTTACTCAATGGCATGGCGGTGACGCTGCTCGTGGTGTACCAAC
CCCAGTGGTTGTTTGACTATTCCGATCGCGAATATCTTTGGCGTAAATAA

Upstream 100 bases:

>100_bases
CAATTATGGGTTTTATTCGCGATATACTCACTCTCGTAAACCGCGATTATCTTTACCGCTTTATCACGCCGAATGGCGCT
GTACTGAGGGAGCCTTTTTC

Downstream 100 bases:

>100_bases
ACGTGGCGTAAGTAAAGAAAGGCGCAAATAAAAAGCGCGCCATAGGGCGCGCATTTATTTAGGCAAAGCGTTGATCTAAG
TAATTAATAATTTCTTTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MLDFWANRLAQIEWGISPLQCLSLLLLALWIYAIWPKEELQQVLKDKGLQWRLLLTLIAVNTLWLLNASIQVGLHLHFLG
IVTCLLMFGWRLATVALLLPSAFFSMFVLKQPAEFGAFSLFAIAIPLFCAFILYSRSYHLFPKHIFVFIFVGAFINAGLS
TVFHQFSWAFWLWLSMDYDWGVLIDNYLMLIPLLAFPEALLNGMAVTLLVVYQPQWLFDYSDREYLWRK

Sequences:

>Translated_229_residues
MLDFWANRLAQIEWGISPLQCLSLLLLALWIYAIWPKEELQQVLKDKGLQWRLLLTLIAVNTLWLLNASIQVGLHLHFLG
IVTCLLMFGWRLATVALLLPSAFFSMFVLKQPAEFGAFSLFAIAIPLFCAFILYSRSYHLFPKHIFVFIFVGAFINAGLS
TVFHQFSWAFWLWLSMDYDWGVLIDNYLMLIPLLAFPEALLNGMAVTLLVVYQPQWLFDYSDREYLWRK
>Mature_229_residues
MLDFWANRLAQIEWGISPLQCLSLLLLALWIYAIWPKEELQQVLKDKGLQWRLLLTLIAVNTLWLLNASIQVGLHLHFLG
IVTCLLMFGWRLATVALLLPSAFFSMFVLKQPAEFGAFSLFAIAIPLFCAFILYSRSYHLFPKHIFVFIFVGAFINAGLS
TVFHQFSWAFWLWLSMDYDWGVLIDNYLMLIPLLAFPEALLNGMAVTLLVVYQPQWLFDYSDREYLWRK

Specific function: Unknown

COG id: COG3235

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26692; Mature: 26692

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDFWANRLAQIEWGISPLQCLSLLLLALWIYAIWPKEELQQVLKDKGLQWRLLLTLIAV
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHH
NTLWLLNASIQVGLHLHFLGIVTCLLMFGWRLATVALLLPSAFFSMFVLKQPAEFGAFSL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
FAIAIPLFCAFILYSRSYHLFPKHIFVFIFVGAFINAGLSTVFHQFSWAFWLWLSMDYDW
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC
GVLIDNYLMLIPLLAFPEALLNGMAVTLLVVYQPQWLFDYSDREYLWRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEECCCCCHHCCCC
>Mature Secondary Structure
MLDFWANRLAQIEWGISPLQCLSLLLLALWIYAIWPKEELQQVLKDKGLQWRLLLTLIAV
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHH
NTLWLLNASIQVGLHLHFLGIVTCLLMFGWRLATVALLLPSAFFSMFVLKQPAEFGAFSL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
FAIAIPLFCAFILYSRSYHLFPKHIFVFIFVGAFINAGLSTVFHQFSWAFWLWLSMDYDW
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC
GVLIDNYLMLIPLLAFPEALLNGMAVTLLVVYQPQWLFDYSDREYLWRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEECCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA