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The map label for this gene is vdlD [H]

Identifier: 117920996

GI number: 117920996

Start: 3057397

End: 3057876

Strand: Reverse

Name: vdlD [H]

Synonym: Shewana3_2555

Alternate gene names: 117920996

Gene position: 3057876-3057397 (Counterclockwise)

Preceding gene: 117920997

Following gene: 117920995

Centisome position: 61.5

GC content: 50.0

Gene sequence:

>480_bases
ATGGCTGGTATCGATAGACAAATTACCCTGAGATTTTTGTCTGAGCCTGCGGATGTGAATTTTGGTGGTAAGGTTCACGG
TGGCGCTGTGATGAAATGGATTGACCTTGCGGCCTATGCCTGCGCAGCAGGTTGGAGTGGTAAATATTGCATTACCGCCT
ATGCGGGGGGGATCCGATTTGTACAACCGATCCTAGTGGGCAATATTGTTGAAGTCAGCGCTAAGGTGATTTATACCGGC
AAGACCTCGATGCATATCGGGATTGATGTACGGGCAGGGGATCCTAAGATCTCTGAGCGCCATCTCACGACTCATTGTAT
CGTTATCATGGTTGCCGTGGATGAAAACGGACAACCGACACCCGTGCCTGAATGGGTGCCGCAGACTGAGCATGATATTC
ATCTGCGTGATTCTGCGCTGCGCTTAATGGAAATGCGCAAGAAAATTGGCGCCGAAATGGAAGCTCACGTGCAAAAGTGA

Upstream 100 bases:

>100_bases
AAGGCAATCGCAATTATCTTTACGCTATTGACCATTTCTATCGTAAACTCAACTTATTGCAAAATCATTGAGCCACAGAG
GCTGAATAAGTTGAGGTTAT

Downstream 100 bases:

>100_bases
TTTTGGCTCGTGATAAAAAGCAAAGGCGCCAATGTGCGCCTTTGTTGTTTCTGTCGAACACTGCGTTTGCTGCCGAGGGC
ATTTTTACTCTGACGCTTGC

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MAGIDRQITLRFLSEPADVNFGGKVHGGAVMKWIDLAAYACAAGWSGKYCITAYAGGIRFVQPILVGNIVEVSAKVIYTG
KTSMHIGIDVRAGDPKISERHLTTHCIVIMVAVDENGQPTPVPEWVPQTEHDIHLRDSALRLMEMRKKIGAEMEAHVQK

Sequences:

>Translated_159_residues
MAGIDRQITLRFLSEPADVNFGGKVHGGAVMKWIDLAAYACAAGWSGKYCITAYAGGIRFVQPILVGNIVEVSAKVIYTG
KTSMHIGIDVRAGDPKISERHLTTHCIVIMVAVDENGQPTPVPEWVPQTEHDIHLRDSALRLMEMRKKIGAEMEAHVQK
>Mature_158_residues
AGIDRQITLRFLSEPADVNFGGKVHGGAVMKWIDLAAYACAAGWSGKYCITAYAGGIRFVQPILVGNIVEVSAKVIYTGK
TSMHIGIDVRAGDPKISERHLTTHCIVIMVAVDENGQPTPVPEWVPQTEHDIHLRDSALRLMEMRKKIGAEMEAHVQK

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Escherichia coli, GI1787506, Length=119, Percent_Identity=31.0924369747899, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 17421; Mature: 17290

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGIDRQITLRFLSEPADVNFGGKVHGGAVMKWIDLAAYACAAGWSGKYCITAYAGGIRF
CCCCCCEEEEEEECCCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHH
VQPILVGNIVEVSAKVIYTGKTSMHIGIDVRAGDPKISERHLTTHCIVIMVAVDENGQPT
HHHHHHCCEEEEEEEEEEECCCEEEEEEEEECCCCCCCCCEEEEEEEEEEEEECCCCCCC
PVPEWVPQTEHDIHLRDSALRLMEMRKKIGAEMEAHVQK
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHCCC
>Mature Secondary Structure 
AGIDRQITLRFLSEPADVNFGGKVHGGAVMKWIDLAAYACAAGWSGKYCITAYAGGIRF
CCCCCEEEEEEECCCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHH
VQPILVGNIVEVSAKVIYTGKTSMHIGIDVRAGDPKISERHLTTHCIVIMVAVDENGQPT
HHHHHHCCEEEEEEEEEEECCCEEEEEEEEECCCCCCCCCEEEEEEEEEEEEECCCCCCC
PVPEWVPQTEHDIHLRDSALRLMEMRKKIGAEMEAHVQK
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]