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The map label for this gene is 117920983

Identifier: 117920983

GI number: 117920983

Start: 3038742

End: 3040061

Strand: Direct

Name: 117920983

Synonym: Shewana3_2542

Alternate gene names: NA

Gene position: 3038742-3040061 (Clockwise)

Preceding gene: 117920981

Following gene: 117920986

Centisome position: 61.11

GC content: 50.68

Gene sequence:

>1320_bases
ATGAATGCAGTCGTTATTGCAGTGTGTTTAATGTTAGCCCTCAGTTTGGCGAGGGTGAATGTGGTGATTGCACTCACTAT
CAGTGCCCTCGTTGCCGGTTTGGTCGGGGGAATGGATCTGCATCAAACGATTGATGCCTTCAATACGGGATTAGGTGGCG
GCGCACAAATCGCCCTCAGTTATGCCTTACTTGGTGCGTTTGCTGTGGCACTATCCCATTCGGGCTTAACGACACTGATC
TCCAACTCCATCATTAAAAGCCTTGGCAAAGATCCCAATGCTACCAACACCAACTGGGTCCGCTGGTTATTGTTGTTATC
CCTGCTCGCTATGTCGATGGCATCGCAAAATATCCTGCCAATCCATATCGCCTTTATTCCGATACTCGTGCCGCCGCTGC
TGCATGTGATGACCAAGCTGAATATCGACCGCCGTCTGGTCGCCTGCGTGCTGACCTTCGGTCTTGTGACCACCTATATG
ATTTTACCCGTAGGCTTTGGTGGGATTTTCTTGAATGATATTTTGCTCTCTAACCTGACGGGCAATGGATTGGTTGCCGT
ACGCGATCAAATACCCCCTGCCATGCTGATCCCCGCCGCCGGTATGGTGGTCGGCTTGCTGATCGCGGTATTTTTCAGTT
ACCGCAAACCTAGGGTTTACGATGAAGCTAAGGTACTGACCGCCGAACCTGAAGAAAGCCTCAATAAACGCAATATCGTT
ATCGCCGCGTTTGCGATTCTGGCGACCCTGTTTGTGCAACTTGAAACCGATTCGATGATCTTCGGCGCCTTAGTCGGCTT
TATGATCTTCAGTTTTTCGGGCGCGCTTAAGCACGTTGCCGATCAAGATATTTTCACCCAAGGCGTGCGCATGATGGCCA
ATATCGGCTTTATCATGATCTCCGCCGCAGGTTTTGCTGCGGTAGTCAAAGAAACCGGCGAAGTCGGCACACTTGTCTCG
TCATTGAGTTCATTGATTGGGGATAATAAAGCCCTTGCCGCCTTTTTGATGTTACTGGTCGGTCTTTTGATCACCATGGG
CATTGGCTCGTCCTTCTCGACCATTCCGATTATCGCGACAATTTACGTGCCCTTAGCCTTAAGCTTTGGTTTTTCAGTGC
CTGCAACTATCGCGTTAGTCGGCACCGCTGCGGCCTTGGGCGATGCTGGCTCACCAGCATCTGACTCAACATTGGGCCCG
ACCTCGGGTTTAAATGCCGATGGTCAGCACGACCATATTCGCGACAGCGTGATCCCAACCTTTATCCATTACAATATTCC
CTTACTGGTCTTTGGTTGGATTGCCGCCATGGTGCTCTAG

Upstream 100 bases:

>100_bases
ATTTTCAGATATTTTTCAGATTAAGCCGCCGTAAACTGGACAGACACGGCCTTTGCAGTCAAAAATAGTCCCTTTGGTTT
ACAGAATTAAGATATTGTCT

Downstream 100 bases:

>100_bases
GGCAGATAGCAATAAAAAAGCGTGGCAAGACCACGCTTTTTTATGCCTAATTTTTAATGTCTAGCTAGCTCAGTAAAAGG
AACTCAGCGCAGGCTATTAT

Product: Na+/H+ antiporter NhaC

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MNAVVIAVCLMLALSLARVNVVIALTISALVAGLVGGMDLHQTIDAFNTGLGGGAQIALSYALLGAFAVALSHSGLTTLI
SNSIIKSLGKDPNATNTNWVRWLLLLSLLAMSMASQNILPIHIAFIPILVPPLLHVMTKLNIDRRLVACVLTFGLVTTYM
ILPVGFGGIFLNDILLSNLTGNGLVAVRDQIPPAMLIPAAGMVVGLLIAVFFSYRKPRVYDEAKVLTAEPEESLNKRNIV
IAAFAILATLFVQLETDSMIFGALVGFMIFSFSGALKHVADQDIFTQGVRMMANIGFIMISAAGFAAVVKETGEVGTLVS
SLSSLIGDNKALAAFLMLLVGLLITMGIGSSFSTIPIIATIYVPLALSFGFSVPATIALVGTAAALGDAGSPASDSTLGP
TSGLNADGQHDHIRDSVIPTFIHYNIPLLVFGWIAAMVL

Sequences:

>Translated_439_residues
MNAVVIAVCLMLALSLARVNVVIALTISALVAGLVGGMDLHQTIDAFNTGLGGGAQIALSYALLGAFAVALSHSGLTTLI
SNSIIKSLGKDPNATNTNWVRWLLLLSLLAMSMASQNILPIHIAFIPILVPPLLHVMTKLNIDRRLVACVLTFGLVTTYM
ILPVGFGGIFLNDILLSNLTGNGLVAVRDQIPPAMLIPAAGMVVGLLIAVFFSYRKPRVYDEAKVLTAEPEESLNKRNIV
IAAFAILATLFVQLETDSMIFGALVGFMIFSFSGALKHVADQDIFTQGVRMMANIGFIMISAAGFAAVVKETGEVGTLVS
SLSSLIGDNKALAAFLMLLVGLLITMGIGSSFSTIPIIATIYVPLALSFGFSVPATIALVGTAAALGDAGSPASDSTLGP
TSGLNADGQHDHIRDSVIPTFIHYNIPLLVFGWIAAMVL
>Mature_439_residues
MNAVVIAVCLMLALSLARVNVVIALTISALVAGLVGGMDLHQTIDAFNTGLGGGAQIALSYALLGAFAVALSHSGLTTLI
SNSIIKSLGKDPNATNTNWVRWLLLLSLLAMSMASQNILPIHIAFIPILVPPLLHVMTKLNIDRRLVACVLTFGLVTTYM
ILPVGFGGIFLNDILLSNLTGNGLVAVRDQIPPAMLIPAAGMVVGLLIAVFFSYRKPRVYDEAKVLTAEPEESLNKRNIV
IAAFAILATLFVQLETDSMIFGALVGFMIFSFSGALKHVADQDIFTQGVRMMANIGFIMISAAGFAAVVKETGEVGTLVS
SLSSLIGDNKALAAFLMLLVGLLITMGIGSSFSTIPIIATIYVPLALSFGFSVPATIALVGTAAALGDAGSPASDSTLGP
TSGLNADGQHDHIRDSVIPTFIHYNIPLLVFGWIAAMVL

Specific function: Unknown

COG id: COG2056

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991
- InterPro:   IPR018461 [H]

Pfam domain/function: PF03553 Na_H_antiporter [H]

EC number: NA

Molecular weight: Translated: 45974; Mature: 45974

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVVIAVCLMLALSLARVNVVIALTISALVAGLVGGMDLHQTIDAFNTGLGGGAQIALS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHH
YALLGAFAVALSHSGLTTLISNSIIKSLGKDPNATNTNWVRWLLLLSLLAMSMASQNILP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
IHIAFIPILVPPLLHVMTKLNIDRRLVACVLTFGLVTTYMILPVGFGGIFLNDILLSNLT
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
GNGLVAVRDQIPPAMLIPAAGMVVGLLIAVFFSYRKPRVYDEAKVLTAEPEESLNKRNIV
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHCCCCHH
IAAFAILATLFVQLETDSMIFGALVGFMIFSFSGALKHVADQDIFTQGVRMMANIGFIMI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
SAAGFAAVVKETGEVGTLVSSLSSLIGDNKALAAFLMLLVGLLITMGIGSSFSTIPIIAT
EHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
IYVPLALSFGFSVPATIALVGTAAALGDAGSPASDSTLGPTSGLNADGQHDHIRDSVIPT
HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
FIHYNIPLLVFGWIAAMVL
HHHCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MNAVVIAVCLMLALSLARVNVVIALTISALVAGLVGGMDLHQTIDAFNTGLGGGAQIALS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHH
YALLGAFAVALSHSGLTTLISNSIIKSLGKDPNATNTNWVRWLLLLSLLAMSMASQNILP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
IHIAFIPILVPPLLHVMTKLNIDRRLVACVLTFGLVTTYMILPVGFGGIFLNDILLSNLT
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
GNGLVAVRDQIPPAMLIPAAGMVVGLLIAVFFSYRKPRVYDEAKVLTAEPEESLNKRNIV
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHCCCCHH
IAAFAILATLFVQLETDSMIFGALVGFMIFSFSGALKHVADQDIFTQGVRMMANIGFIMI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
SAAGFAAVVKETGEVGTLVSSLSSLIGDNKALAAFLMLLVGLLITMGIGSSFSTIPIIAT
EHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
IYVPLALSFGFSVPATIALVGTAAALGDAGSPASDSTLGPTSGLNADGQHDHIRDSVIPT
HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
FIHYNIPLLVFGWIAAMVL
HHHCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12620739; 8021208 [H]