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The map label for this gene is 117920979

Identifier: 117920979

GI number: 117920979

Start: 3035478

End: 3035891

Strand: Direct

Name: 117920979

Synonym: Shewana3_2538

Alternate gene names: NA

Gene position: 3035478-3035891 (Clockwise)

Preceding gene: 117920968

Following gene: 117920981

Centisome position: 61.05

GC content: 45.17

Gene sequence:

>414_bases
ATGAGAAAAGACAGTCGATTATCGCGTGTATTACACATTCTTGTGCATTTAGATGCATTTGCAACGCAGCTCACTTCCGA
AAAAATGGCCGAAATGATTGGAACTAACCCCGTGGTGGTTCGCCGAACAATGGCGCTACTGCGAGATCAAGGTTATGTCA
CCTCAAGCAAAGGGCATGCTGGCGGCTGGGCTTTGGCAAAACCACTTGCCAAGATCACTCTGCTGGAAATTCATCAAGCA
CTAGGAGACAGTGCCTTTTTTACGATTGGCCTGACTGATGAACACAATAACTGCCCTATTGAAATAGCCGTCAACGACGC
ATTAAAGGACGTTATGCAAGAAGCTGAGTCATTGTTGCTGCAACGATTTGGTGAGATCACCTTAGATAAATTGGCGTTTA
CTCAATCGGTATAA

Upstream 100 bases:

>100_bases
TTGTGTAACTTTTATTGTTACATGATAATATTGTGAGAATCAACACATGTAACTTCAAAAGTTTCATGATATGCTTCGAC
GAAATAGCAATAGGTGTTGT

Downstream 100 bases:

>100_bases
TGAGCGCATAAACTGTGAGAAGAAAGAAACCAATAACGCCAAGTCAGAAGGCTTGGCATTGTTGGTTTATATGAAGTGCA
TTTAAACTGAACGAAACTAG

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator BadM/Rrf2 Family; Transcriptional Regulator; Rrf2 Family Protein; Transcriptional Regulator Badm/Rrf2 Family; Rrf2 Family Transcriptional Regulator; Transcriptional Regulator Family; Transcriptional Regulator Superfamily; HTH Domain-Containing; Transcriptional Regulator Rrf2 Family; Transcription Regulator Protein; HTH-Type Transcriptional Regulator YwnA; Transcription Regulator; Transcriptional Regulator Family Protein; Rf2 Family Transcriptional Regulator

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MRKDSRLSRVLHILVHLDAFATQLTSEKMAEMIGTNPVVVRRTMALLRDQGYVTSSKGHAGGWALAKPLAKITLLEIHQA
LGDSAFFTIGLTDEHNNCPIEIAVNDALKDVMQEAESLLLQRFGEITLDKLAFTQSV

Sequences:

>Translated_137_residues
MRKDSRLSRVLHILVHLDAFATQLTSEKMAEMIGTNPVVVRRTMALLRDQGYVTSSKGHAGGWALAKPLAKITLLEIHQA
LGDSAFFTIGLTDEHNNCPIEIAVNDALKDVMQEAESLLLQRFGEITLDKLAFTQSV
>Mature_137_residues
MRKDSRLSRVLHILVHLDAFATQLTSEKMAEMIGTNPVVVRRTMALLRDQGYVTSSKGHAGGWALAKPLAKITLLEIHQA
LGDSAFFTIGLTDEHNNCPIEIAVNDALKDVMQEAESLLLQRFGEITLDKLAFTQSV

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15116; Mature: 15116

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKDSRLSRVLHILVHLDAFATQLTSEKMAEMIGTNPVVVRRTMALLRDQGYVTSSKGHA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEECCCCCC
GGWALAKPLAKITLLEIHQALGDSAFFTIGLTDEHNNCPIEIAVNDALKDVMQEAESLLL
CCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHH
QRFGEITLDKLAFTQSV
HHHCCHHHHHHHHHCCC
>Mature Secondary Structure
MRKDSRLSRVLHILVHLDAFATQLTSEKMAEMIGTNPVVVRRTMALLRDQGYVTSSKGHA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEECCCCCC
GGWALAKPLAKITLLEIHQALGDSAFFTIGLTDEHNNCPIEIAVNDALKDVMQEAESLLL
CCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHH
QRFGEITLDKLAFTQSV
HHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA