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The map label for this gene is yejH [H]

Identifier: 117920967

GI number: 117920967

Start: 3021537

End: 3023309

Strand: Direct

Name: yejH [H]

Synonym: Shewana3_2524

Alternate gene names: 117920967

Gene position: 3021537-3023309 (Clockwise)

Preceding gene: 117920966

Following gene: 117920968

Centisome position: 60.77

GC content: 48.79

Gene sequence:

>1773_bases
GTGTCAGTTAATTCCAACCCAAGCGTTACCCTCAGGGATTACCAGCAACAAGCCGTCGATGCCGCCATCGCGCATTTCAA
AAAAAGCACCGATTCCGCCGTATTAGTCCTACCAACGGGAGCCGGGAAAAGTATCGTTATTGCCGAGCTGGCCCGCATCG
CCAGAGGACGAGTGCTTGTTTTAACCCATGTGAAGGAACTGGTTGCCCAAAACGCGCAAAAGGTGGGGTTACTGACGACT
GAAGCCAGCATTTACTCCGCAGGGTTAAATCAAAAATCGACTGACGGCAAAACCGTCGTGGCCAGTGTCCAATCCGCCGC
GCGCGCATTAAATCAATTCGATGAGCCCTTCTCGCTAGTGATTATCGATGAGTGCCACAGAGTCAGCCTCGAAAAAACCA
GTCAATATCAGCAAATCTTAAGTCATTTACAGCAGCGTAATCCCAAGCTGAGGTTATTAGGCCTAACGGCCACTCCCTAT
CGGCTCGGTACGGGCTGGATTTACAAACGCCATTACCATGGCAAAGTTGGCTCGCCTGAACTTGGGATCTTCGAGCAGTG
TATTTTCGAGCTTCCCATCCGTCCGCTGATTAAACAAGGTTATTTAACCGCGCCCACCTTGTTCGATGGTTTAAGCGCTC
AATATGACTTCAGCCAAATCAAGCCCAATGACAATGGCGAATATCCCGAGGCCCAAGTCAATGCACTGCTGAATCACGCC
GGGCGCGCGACAACGGCGATTGTGAAGCAACTGATTGAACTGAGTCACCACCGCCAGGGGATCATTATTTTTGCGGCGAC
AGTGCGCCATGCTGAGGAAATTGTCAGCCAGCTCAATAAGGAGCACAGCGAGCAAACGGCAATCGTCACGGCACAAACGC
CAGATAATGAGCGTGATGAGCTTATCAAGCGCTTTAAAGCGAGGGAGCTTAAGTTCCTCGTCAACGTGGCGGTATTGACC
ACGGGATTCGATGCGCCCCATGTGGATTTAATTGCGATTTTACGCCCCACCGCATCGGTGAGTTTGTTTCAGCAAATGAT
TGGCCGCGGTCTTAGGATCTGTGAAAGTAAAAAAGATTGTTTAGTGATTGATTACGCAGCCAATGGCTATGATTTGTATT
TTCCAGAAGTCGGTCAAGCTAAGCCCAATAGCAAGTCGGTTCCGGTACAAGTGCACTGCCCTGTCTGCCAGTTTGCCAAT
ATCTTTTGGGGATTAACCGACAATGATGGCGATATTATCGAACACTTTGGCCGTCGCTGTCAGGGCATAGTCGAGCATCA
TGGGCAAAAGCAGCAATGTGACTTTCGATTTAGATCTAAATCCTGTCCCGATTGTGGACAAGAGAACGACATTGCAGCGC
GTATTTGCCAGCATTGCCAATCAACCTTAATCGACCCCGACAAACGCCTTAAGCAAGTATTGAATAAGCAGCACCATCAT
CTGTTCCGCTGCCAACATATGACGTTATTAGATGATGCGGGCGATCTTAAGGTGCAATATCTGGACATTGAAGGAAACGA
GTTTAATCGACGCTTTAAACTGCAAACGCCAGCCCAATGGCGTGCCTTGTATGCGCTGTTTATTTTTCCCCATAGTCGCA
CGCCGGGCCTAAAACCTAAGCAATACAAAAACGTGTCTGAGCTGATTGCCGATAGTACCGCCTTTCGAATGCCAGATCTG
TTACTGCTCAAAAAGCACAAAAAAGGCTGGGATCTGCTCGAAAGCTATTTCGATTACCAAGGGCGCTATCAAACTGAAAA
TAAACACATCTGA

Upstream 100 bases:

>100_bases
ATTGCCCCTTTCTCTTAGTTGCCCCTCCAACCAAGGGGCATTTTTTTGGTTCTGTGTTAAGCTTGGCGCCAAACTCAATC
AACCAAGAATAGCTAACAGC

Downstream 100 bases:

>100_bases
CATTATCAATTCGGTTAGCGCTATGGTATAAAACGCTTAAAGTAATCCTAAGGAGCTATTATGTACGTTGTTATTTTTGG
CCGTCCTGGCTGTCCTTATT

Product: type III restriction enzyme, res subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 590; Mature: 589

Protein sequence:

>590_residues
MSVNSNPSVTLRDYQQQAVDAAIAHFKKSTDSAVLVLPTGAGKSIVIAELARIARGRVLVLTHVKELVAQNAQKVGLLTT
EASIYSAGLNQKSTDGKTVVASVQSAARALNQFDEPFSLVIIDECHRVSLEKTSQYQQILSHLQQRNPKLRLLGLTATPY
RLGTGWIYKRHYHGKVGSPELGIFEQCIFELPIRPLIKQGYLTAPTLFDGLSAQYDFSQIKPNDNGEYPEAQVNALLNHA
GRATTAIVKQLIELSHHRQGIIIFAATVRHAEEIVSQLNKEHSEQTAIVTAQTPDNERDELIKRFKARELKFLVNVAVLT
TGFDAPHVDLIAILRPTASVSLFQQMIGRGLRICESKKDCLVIDYAANGYDLYFPEVGQAKPNSKSVPVQVHCPVCQFAN
IFWGLTDNDGDIIEHFGRRCQGIVEHHGQKQQCDFRFRSKSCPDCGQENDIAARICQHCQSTLIDPDKRLKQVLNKQHHH
LFRCQHMTLLDDAGDLKVQYLDIEGNEFNRRFKLQTPAQWRALYALFIFPHSRTPGLKPKQYKNVSELIADSTAFRMPDL
LLLKKHKKGWDLLESYFDYQGRYQTENKHI

Sequences:

>Translated_590_residues
MSVNSNPSVTLRDYQQQAVDAAIAHFKKSTDSAVLVLPTGAGKSIVIAELARIARGRVLVLTHVKELVAQNAQKVGLLTT
EASIYSAGLNQKSTDGKTVVASVQSAARALNQFDEPFSLVIIDECHRVSLEKTSQYQQILSHLQQRNPKLRLLGLTATPY
RLGTGWIYKRHYHGKVGSPELGIFEQCIFELPIRPLIKQGYLTAPTLFDGLSAQYDFSQIKPNDNGEYPEAQVNALLNHA
GRATTAIVKQLIELSHHRQGIIIFAATVRHAEEIVSQLNKEHSEQTAIVTAQTPDNERDELIKRFKARELKFLVNVAVLT
TGFDAPHVDLIAILRPTASVSLFQQMIGRGLRICESKKDCLVIDYAANGYDLYFPEVGQAKPNSKSVPVQVHCPVCQFAN
IFWGLTDNDGDIIEHFGRRCQGIVEHHGQKQQCDFRFRSKSCPDCGQENDIAARICQHCQSTLIDPDKRLKQVLNKQHHH
LFRCQHMTLLDDAGDLKVQYLDIEGNEFNRRFKLQTPAQWRALYALFIFPHSRTPGLKPKQYKNVSELIADSTAFRMPDL
LLLKKHKKGWDLLESYFDYQGRYQTENKHI
>Mature_589_residues
SVNSNPSVTLRDYQQQAVDAAIAHFKKSTDSAVLVLPTGAGKSIVIAELARIARGRVLVLTHVKELVAQNAQKVGLLTTE
ASIYSAGLNQKSTDGKTVVASVQSAARALNQFDEPFSLVIIDECHRVSLEKTSQYQQILSHLQQRNPKLRLLGLTATPYR
LGTGWIYKRHYHGKVGSPELGIFEQCIFELPIRPLIKQGYLTAPTLFDGLSAQYDFSQIKPNDNGEYPEAQVNALLNHAG
RATTAIVKQLIELSHHRQGIIIFAATVRHAEEIVSQLNKEHSEQTAIVTAQTPDNERDELIKRFKARELKFLVNVAVLTT
GFDAPHVDLIAILRPTASVSLFQQMIGRGLRICESKKDCLVIDYAANGYDLYFPEVGQAKPNSKSVPVQVHCPVCQFANI
FWGLTDNDGDIIEHFGRRCQGIVEHHGQKQQCDFRFRSKSCPDCGQENDIAARICQHCQSTLIDPDKRLKQVLNKQHHHL
FRCQHMTLLDDAGDLKVQYLDIEGNEFNRRFKLQTPAQWRALYALFIFPHSRTPGLKPKQYKNVSELIADSTAFRMPDLL
LLKKHKKGWDLLESYFDYQGRYQTENKHI

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788511, Length=580, Percent_Identity=54.8275862068965, Blast_Score=643, Evalue=0.0,
Organism=Escherichia coli, GI226510991, Length=440, Percent_Identity=26.3636363636364, Blast_Score=74, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6320539, Length=372, Percent_Identity=27.6881720430108, Blast_Score=132, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR006935 [H]

Pfam domain/function: PF00271 Helicase_C; PF04851 ResIII [H]

EC number: NA

Molecular weight: Translated: 66552; Mature: 66421

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVNSNPSVTLRDYQQQAVDAAIAHFKKSTDSAVLVLPTGAGKSIVIAELARIARGRVLV
CCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEE
LTHVKELVAQNAQKVGLLTTEASIYSAGLNQKSTDGKTVVASVQSAARALNQFDEPFSLV
HHHHHHHHHCCCHHCEEEEECHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEE
IIDECHRVSLEKTSQYQQILSHLQQRNPKLRLLGLTATPYRLGTGWIYKRHYHGKVGSPE
EEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEECCCCEEEEEEECCCCCCCC
LGIFEQCIFELPIRPLIKQGYLTAPTLFDGLSAQYDFSQIKPNDNGEYPEAQVNALLNHA
CCHHHHHHHHCCCHHHHHCCCCCCCHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHC
GRATTAIVKQLIELSHHRQGIIIFAATVRHAEEIVSQLNKEHSEQTAIVTAQTPDNERDE
CHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH
LIKRFKARELKFLVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMIGRGLRICESKKDC
HHHHHHHHHHHHHHEEHHHEECCCCCCCEEEEEECCCHHHHHHHHHHHCHHHHHCCCCCE
LVIDYAANGYDLYFPEVGQAKPNSKSVPVQVHCPVCQFANIFWGLTDNDGDIIEHFGRRC
EEEEECCCCEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHEEEECCCCHHHHHHHHHH
QGIVEHHGQKQQCDFRFRSKSCPDCGQENDIAARICQHCQSTLIDPDKRLKQVLNKQHHH
HHHHHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LFRCQHMTLLDDAGDLKVQYLDIEGNEFNRRFKLQTPAQWRALYALFIFPHSRTPGLKPK
HHHHCCCEEECCCCCCEEEEEEECCCCCCCEEEECCCHHHHHEEEEEEEECCCCCCCCCH
QYKNVSELIADSTAFRMPDLLLLKKHKKGWDLLESYFDYQGRYQTENKHI
HHCCHHHHHHCCHHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SVNSNPSVTLRDYQQQAVDAAIAHFKKSTDSAVLVLPTGAGKSIVIAELARIARGRVLV
CCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEE
LTHVKELVAQNAQKVGLLTTEASIYSAGLNQKSTDGKTVVASVQSAARALNQFDEPFSLV
HHHHHHHHHCCCHHCEEEEECHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEE
IIDECHRVSLEKTSQYQQILSHLQQRNPKLRLLGLTATPYRLGTGWIYKRHYHGKVGSPE
EEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEECCCCEEEEEEECCCCCCCC
LGIFEQCIFELPIRPLIKQGYLTAPTLFDGLSAQYDFSQIKPNDNGEYPEAQVNALLNHA
CCHHHHHHHHCCCHHHHHCCCCCCCHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHC
GRATTAIVKQLIELSHHRQGIIIFAATVRHAEEIVSQLNKEHSEQTAIVTAQTPDNERDE
CHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH
LIKRFKARELKFLVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMIGRGLRICESKKDC
HHHHHHHHHHHHHHEEHHHEECCCCCCCEEEEEECCCHHHHHHHHHHHCHHHHHCCCCCE
LVIDYAANGYDLYFPEVGQAKPNSKSVPVQVHCPVCQFANIFWGLTDNDGDIIEHFGRRC
EEEEECCCCEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHEEEECCCCHHHHHHHHHH
QGIVEHHGQKQQCDFRFRSKSCPDCGQENDIAARICQHCQSTLIDPDKRLKQVLNKQHHH
HHHHHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LFRCQHMTLLDDAGDLKVQYLDIEGNEFNRRFKLQTPAQWRALYALFIFPHSRTPGLKPK
HHHHCCCEEECCCCCCEEEEEEECCCCCCCEEEECCCHHHHHEEEEEEEECCCCCCCCCH
QYKNVSELIADSTAFRMPDLLLLKKHKKGWDLLESYFDYQGRYQTENKHI
HHCCHHHHHHCCHHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]