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The map label for this gene is 117920949

Identifier: 117920949

GI number: 117920949

Start: 2996854

End: 2997381

Strand: Reverse

Name: 117920949

Synonym: Shewana3_2506

Alternate gene names: NA

Gene position: 2997381-2996854 (Counterclockwise)

Preceding gene: 117920950

Following gene: 117920948

Centisome position: 60.28

GC content: 52.08

Gene sequence:

>528_bases
ATGAAGGTTAATCCCGAGTTTTTTCCGCTGACTCAAATGGCGCAGCGATTTGTCGATCAGCTCGCCCAGTGCCGCCGCTT
AGGGCTCACCGTGCTCGAGGCCAGTGAGCATCATGTACTGATTGAGTTGCCCTATAGCACTGAGTTAATTGGTTATCCCG
ATACAGGTGTTATCCATGGCGGGGTGATCACCACCCTGATGGACACCGCCTGTGGCAGCGCTGTAGTGAGTGCGATTTTT
CAAAAATATCAATCCTTAGAGATTTCGCCCACCCTCGACTTACGGGTCGATTATATGAAGCCCGCCCAGCCCCATAAGCC
AGTTTATGGCTTTGCCGAGTGCTATAAGTTGTCATCTAATATCGCCTTTACCCGCGCCATCGCCTATCAGGACAGCATTG
ATGATCCTATCGCCCATGCGGTGGGCTCCTTTATGCGCATCAGCCCCGAAATGGTAGGGGATGCCTTTAGGCAAGCCTTG
ATGGGAGAAGCCGTGCCGCCCTTAGGAGAGACAGATGAACTCAAATAA

Upstream 100 bases:

>100_bases
TGATCATGAACTGCAACAAACATGGCGGACAGGAAGTGTACCATATCCATATTCATCTCGTCGGCGGAGAGCCATTGGGA
CCCATGCTGAGCCAAGGTCA

Downstream 100 bases:

>100_bases
GCCGACCGAGCAGAAAACCCTCGATGTGCAGGGAATTGTAAAACGCGCCACCGAGCTGAACGACTTTGGTCATCTACTCG
AACACGTGCCCTATGCTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Thioesterase Family Protein; Phenylacetic Acid Degradation-Related Protein; Phenylacetic Acid Degradation-Like Protein; Thioesterase Superfamily; Thioesterase Family Protein Domain Protein; Conserved Domain Protein; Protein Possibly Involved In Aromatic Compounds Catabolism

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MKVNPEFFPLTQMAQRFVDQLAQCRRLGLTVLEASEHHVLIELPYSTELIGYPDTGVIHGGVITTLMDTACGSAVVSAIF
QKYQSLEISPTLDLRVDYMKPAQPHKPVYGFAECYKLSSNIAFTRAIAYQDSIDDPIAHAVGSFMRISPEMVGDAFRQAL
MGEAVPPLGETDELK

Sequences:

>Translated_175_residues
MKVNPEFFPLTQMAQRFVDQLAQCRRLGLTVLEASEHHVLIELPYSTELIGYPDTGVIHGGVITTLMDTACGSAVVSAIF
QKYQSLEISPTLDLRVDYMKPAQPHKPVYGFAECYKLSSNIAFTRAIAYQDSIDDPIAHAVGSFMRISPEMVGDAFRQAL
MGEAVPPLGETDELK
>Mature_175_residues
MKVNPEFFPLTQMAQRFVDQLAQCRRLGLTVLEASEHHVLIELPYSTELIGYPDTGVIHGGVITTLMDTACGSAVVSAIF
QKYQSLEISPTLDLRVDYMKPAQPHKPVYGFAECYKLSSNIAFTRAIAYQDSIDDPIAHAVGSFMRISPEMVGDAFRQAL
MGEAVPPLGETDELK

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19309; Mature: 19309

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVNPEFFPLTQMAQRFVDQLAQCRRLGLTVLEASEHHVLIELPYSTELIGYPDTGVIHG
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCCEEECCCCCCCCCC
GVITTLMDTACGSAVVSAIFQKYQSLEISPTLDLRVDYMKPAQPHKPVYGFAECYKLSSN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCC
IAFTRAIAYQDSIDDPIAHAVGSFMRISPEMVGDAFRQALMGEAVPPLGETDELK
CHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKVNPEFFPLTQMAQRFVDQLAQCRRLGLTVLEASEHHVLIELPYSTELIGYPDTGVIHG
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCCEEECCCCCCCCCC
GVITTLMDTACGSAVVSAIFQKYQSLEISPTLDLRVDYMKPAQPHKPVYGFAECYKLSSN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCC
IAFTRAIAYQDSIDDPIAHAVGSFMRISPEMVGDAFRQALMGEAVPPLGETDELK
CHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA