| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920899
Identifier: 117920899
GI number: 117920899
Start: 2944577
End: 2944846
Strand: Reverse
Name: 117920899
Synonym: Shewana3_2456
Alternate gene names: NA
Gene position: 2944846-2944577 (Counterclockwise)
Preceding gene: 117920901
Following gene: 117920898
Centisome position: 59.23
GC content: 49.63
Gene sequence:
>270_bases ATGGCGCGTTTTAACAGTGACTATCACGAGAGCGGAATAGCTATGTTAGTGGAATTTTCTCAGGGTAAGTTGATTGCCAC TGAATTTGAAGTGCAGATCCGGCTGAACATGGCCAATGTGGTGCTTCAAGCCGCGGCCGAAGACATCAGCCTTAGGCAGG AGCCGCCGATGATCATCGCCAATGGCGGAGGCGTGCGTTGGAGCATTAAATTAGATAACACAAACCAGCTCGACGCTTTG CAAGCTCTCCTCGGCATTGATTATCTGTAA
Upstream 100 bases:
>100_bases TGGCGATGGATAAACCTAAGCTTGCTCAACCTATGGCTGGTCTGTCATCAACCCTAATGCGAGTTTAAAAGTTCATCCTT GGCGAAATAACTTTGCTATC
Downstream 100 bases:
>100_bases AGCGCTCGCGGGGCGAGAATAATAACTTTTGATTTATAAGGGATTTGTCAGTATGACACTTGAACGTATTGTGATTGAGC CTCAAGTTGAGGCGACGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MARFNSDYHESGIAMLVEFSQGKLIATEFEVQIRLNMANVVLQAAAEDISLRQEPPMIIANGGGVRWSIKLDNTNQLDAL QALLGIDYL
Sequences:
>Translated_89_residues MARFNSDYHESGIAMLVEFSQGKLIATEFEVQIRLNMANVVLQAAAEDISLRQEPPMIIANGGGVRWSIKLDNTNQLDAL QALLGIDYL >Mature_88_residues ARFNSDYHESGIAMLVEFSQGKLIATEFEVQIRLNMANVVLQAAAEDISLRQEPPMIIANGGGVRWSIKLDNTNQLDALQ ALLGIDYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9849; Mature: 9718
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARFNSDYHESGIAMLVEFSQGKLIATEFEVQIRLNMANVVLQAAAEDISLRQEPPMIIA CCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEEEEHHHHHHHHHHCCCCCCCCCCEEEE NGGGVRWSIKLDNTNQLDALQALLGIDYL CCCCEEEEEEECCCCCHHHHHHHHCCCCC >Mature Secondary Structure ARFNSDYHESGIAMLVEFSQGKLIATEFEVQIRLNMANVVLQAAAEDISLRQEPPMIIA CCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEEEEHHHHHHHHHHCCCCCCCCCCEEEE NGGGVRWSIKLDNTNQLDALQALLGIDYL CCCCEEEEEEECCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA