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The map label for this gene is 117920879

Identifier: 117920879

GI number: 117920879

Start: 2921662

End: 2923128

Strand: Reverse

Name: 117920879

Synonym: Shewana3_2436

Alternate gene names: NA

Gene position: 2923128-2921662 (Counterclockwise)

Preceding gene: 117920881

Following gene: 117920875

Centisome position: 58.79

GC content: 48.88

Gene sequence:

>1467_bases
ATGAAAGCCATCATCATAGGCTCAACCAAGCATTTATTTTTCGCGGCATTTTATGCCTGTTTGGGGATTGCCGTTGCCCT
GTTGGTGACAGGCATACATTTTCTCAATGCCAGACCCGATCTTTCCCTCTGGCACACTACTGAGCTTAAAAACGAGTTTC
GTTACAACACTAAATTAGACAAATTCAGTGATTACATCGCCTTAGAAGATAAGTTATTTGCCGAAGTGGACAATAAAGTC
CTTAAAAAAGTCTCGGCGACGGATGCTTCACCCGTGAATCGCTATGTTAAAAACAGTCTGTCGGATCCCGCCCGTTGGCC
CCATAACTGGAATCGCACCTTCGAGTGGCCCAAGGCCGATGCGCCCTTTGGCGTACTGTTGCTCCATGGTATGTCCGATT
CGCCCTATGCCATGTCCAATGTGGCGGCACATTTTAAGGGTAAAGCCCATGTGCTTGGCTTAAGACTCCCTGGCCATGGC
ACCATTCCGAGTGGTTTGACGAGCCTCTACTGGCAGGACTTAGCCGCGGCGGTGAACTTGGCTACAGCGCATATGAAACA
AGAGCTTAAAGGGAAACCGCTGTTTGTGATTGGCTTTTCAACGGGCGCCGCGGTAGCGCTAAACCATGAGTTAGAGCTTA
TTAATCAGGAGAAAGATCCTGATTATGCGGGAATGATTTTTATGTCGCCCGCCATTGGGCTTGCACCGATTGCGGCGGCG
GCCCGTTGGCAAAGCTGGATTGGCCGTTTACTCGATTTAGATAAATTGCAGTGGAACAGTATTCAGATGGAATACGATCC
CTTTAAATACACCTCTTTTGCGGTGAACGCGGGCGATGTGGTCTATCAATTAGCGCTGCGTAATCAAAGCTTATTGAGTG
GGCTAACGCCTTCACAACGTGAGTCTATTCCTGACATATTAACCTTTCAATCTGTCGCCGATGCGACGGTGTCAAGTGCC
GCGGTAGTGAACCTGCTTTACCAAGTGCTGCCCGAGAAAGGCCATGAGTTAGTGTTGTTTGATATGAACCGTACCGTGAT
CAACAGTAAATTGATGGCAAATGATCCGCTGCTCGCGTTATTACCGGCATCCTCCGACACTATCCATTACCGTGGCACCT
TGATTGAAAATCAGGATAGCGAGACGACTCAGGTTCAAGCGCGGGAGTTTGGCCTTATACCTCAAGATAATAGTGTGCCA
GCGCTGGAAAGCTTATCTTTGCATTGGCCTGCGGGGGTGTATTCTCTGTCCCATGTGGCCTTACCCTTTAATGAAGATGA
TGGACTATACGGCATTAAAACCAATGAAAAATTACACCGGATCCAAATTGGCGCTGCATCATCCCGTGGCGAGCGTGGAG
TGTATAGCGTGCCCGCCGCGGAAATGTTACGCCAAAAATGGAATCCGTTTTTCCCCTATATGCTGACGCGGATTGACCAA
TATCGCACCGCGCATATGCCCGATTAA

Upstream 100 bases:

>100_bases
TAAATTGCCGCGAGATCAAATATTAAACATGAAAGTTGAGGTTTTTTTTTATCTAACCTTATAATCTGATTGCGCATTTT
ACGGGATCCAAGGGACGAGA

Downstream 100 bases:

>100_bases
ACTGTGACTAGGGTGCAAACCACGCAGTTGCGCCCTTGTTCCTTAGCTTTATAGAGGTTCTCATCCGCTTGTTTTAACCA
AACTTCAAGCGTTGAGCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MKAIIIGSTKHLFFAAFYACLGIAVALLVTGIHFLNARPDLSLWHTTELKNEFRYNTKLDKFSDYIALEDKLFAEVDNKV
LKKVSATDASPVNRYVKNSLSDPARWPHNWNRTFEWPKADAPFGVLLLHGMSDSPYAMSNVAAHFKGKAHVLGLRLPGHG
TIPSGLTSLYWQDLAAAVNLATAHMKQELKGKPLFVIGFSTGAAVALNHELELINQEKDPDYAGMIFMSPAIGLAPIAAA
ARWQSWIGRLLDLDKLQWNSIQMEYDPFKYTSFAVNAGDVVYQLALRNQSLLSGLTPSQRESIPDILTFQSVADATVSSA
AVVNLLYQVLPEKGHELVLFDMNRTVINSKLMANDPLLALLPASSDTIHYRGTLIENQDSETTQVQAREFGLIPQDNSVP
ALESLSLHWPAGVYSLSHVALPFNEDDGLYGIKTNEKLHRIQIGAASSRGERGVYSVPAAEMLRQKWNPFFPYMLTRIDQ
YRTAHMPD

Sequences:

>Translated_488_residues
MKAIIIGSTKHLFFAAFYACLGIAVALLVTGIHFLNARPDLSLWHTTELKNEFRYNTKLDKFSDYIALEDKLFAEVDNKV
LKKVSATDASPVNRYVKNSLSDPARWPHNWNRTFEWPKADAPFGVLLLHGMSDSPYAMSNVAAHFKGKAHVLGLRLPGHG
TIPSGLTSLYWQDLAAAVNLATAHMKQELKGKPLFVIGFSTGAAVALNHELELINQEKDPDYAGMIFMSPAIGLAPIAAA
ARWQSWIGRLLDLDKLQWNSIQMEYDPFKYTSFAVNAGDVVYQLALRNQSLLSGLTPSQRESIPDILTFQSVADATVSSA
AVVNLLYQVLPEKGHELVLFDMNRTVINSKLMANDPLLALLPASSDTIHYRGTLIENQDSETTQVQAREFGLIPQDNSVP
ALESLSLHWPAGVYSLSHVALPFNEDDGLYGIKTNEKLHRIQIGAASSRGERGVYSVPAAEMLRQKWNPFFPYMLTRIDQ
YRTAHMPD
>Mature_488_residues
MKAIIIGSTKHLFFAAFYACLGIAVALLVTGIHFLNARPDLSLWHTTELKNEFRYNTKLDKFSDYIALEDKLFAEVDNKV
LKKVSATDASPVNRYVKNSLSDPARWPHNWNRTFEWPKADAPFGVLLLHGMSDSPYAMSNVAAHFKGKAHVLGLRLPGHG
TIPSGLTSLYWQDLAAAVNLATAHMKQELKGKPLFVIGFSTGAAVALNHELELINQEKDPDYAGMIFMSPAIGLAPIAAA
ARWQSWIGRLLDLDKLQWNSIQMEYDPFKYTSFAVNAGDVVYQLALRNQSLLSGLTPSQRESIPDILTFQSVADATVSSA
AVVNLLYQVLPEKGHELVLFDMNRTVINSKLMANDPLLALLPASSDTIHYRGTLIENQDSETTQVQAREFGLIPQDNSVP
ALESLSLHWPAGVYSLSHVALPFNEDDGLYGIKTNEKLHRIQIGAASSRGERGVYSVPAAEMLRQKWNPFFPYMLTRIDQ
YRTAHMPD

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54224; Mature: 54224

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAIIIGSTKHLFFAAFYACLGIAVALLVTGIHFLNARPDLSLWHTTELKNEFRYNTKLD
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCCHH
KFSDYIALEDKLFAEVDNKVLKKVSATDASPVNRYVKNSLSDPARWPHNWNRTFEWPKAD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
APFGVLLLHGMSDSPYAMSNVAAHFKGKAHVLGLRLPGHGTIPSGLTSLYWQDLAAAVNL
CCEEEEEEECCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
ATAHMKQELKGKPLFVIGFSTGAAVALNHELELINQEKDPDYAGMIFMSPAIGLAPIAAA
HHHHHHHHHCCCCEEEEEECCCCEEEEECCHHEECCCCCCCCCEEEEECCCCCHHHHHHH
ARWQSWIGRLLDLDKLQWNSIQMEYDPFKYTSFAVNAGDVVYQLALRNQSLLSGLTPSQR
HHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCHHEEHHHHCCHHHHHCCCCHHH
ESIPDILTFQSVADATVSSAAVVNLLYQVLPEKGHELVLFDMNRTVINSKLMANDPLLAL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHCCCCCCCCCEEEE
LPASSDTIHYRGTLIENQDSETTQVQAREFGLIPQDNSVPALESLSLHWPAGVYSLSHVA
ECCCCCEEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCHHHCCEEECCCCHHHHEEEE
LPFNEDDGLYGIKTNEKLHRIQIGAASSRGERGVYSVPAAEMLRQKWNPFFPYMLTRIDQ
EEECCCCCEEEEECCCCEEEEEEECCCCCCCCCEEECCHHHHHHHHCCCCHHHHHHHHHH
YRTAHMPD
HHHCCCCC
>Mature Secondary Structure
MKAIIIGSTKHLFFAAFYACLGIAVALLVTGIHFLNARPDLSLWHTTELKNEFRYNTKLD
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCCHH
KFSDYIALEDKLFAEVDNKVLKKVSATDASPVNRYVKNSLSDPARWPHNWNRTFEWPKAD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
APFGVLLLHGMSDSPYAMSNVAAHFKGKAHVLGLRLPGHGTIPSGLTSLYWQDLAAAVNL
CCEEEEEEECCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
ATAHMKQELKGKPLFVIGFSTGAAVALNHELELINQEKDPDYAGMIFMSPAIGLAPIAAA
HHHHHHHHHCCCCEEEEEECCCCEEEEECCHHEECCCCCCCCCEEEEECCCCCHHHHHHH
ARWQSWIGRLLDLDKLQWNSIQMEYDPFKYTSFAVNAGDVVYQLALRNQSLLSGLTPSQR
HHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCHHEEHHHHCCHHHHHCCCCHHH
ESIPDILTFQSVADATVSSAAVVNLLYQVLPEKGHELVLFDMNRTVINSKLMANDPLLAL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHCCCCCCCCCEEEE
LPASSDTIHYRGTLIENQDSETTQVQAREFGLIPQDNSVPALESLSLHWPAGVYSLSHVA
ECCCCCEEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCHHHCCEEECCCCHHHHEEEE
LPFNEDDGLYGIKTNEKLHRIQIGAASSRGERGVYSVPAAEMLRQKWNPFFPYMLTRIDQ
EEECCCCCEEEEECCCCEEEEEEECCCCCCCCCEEECCHHHHHHHHCCCCHHHHHHHHHH
YRTAHMPD
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA