| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is 117920875
Identifier: 117920875
GI number: 117920875
Start: 2915562
End: 2915813
Strand: Reverse
Name: 117920875
Synonym: Shewana3_2432
Alternate gene names: NA
Gene position: 2915813-2915562 (Counterclockwise)
Preceding gene: 117920879
Following gene: 117920872
Centisome position: 58.64
GC content: 44.84
Gene sequence:
>252_bases ATGAACAGTTCAATGGTCGTAAAGATTGTCATTGTTGCAACTGTGACCGTTGGCGGCATGGATGCCGCCGTCGAGCCTAT AGGGACATATTCACGGCGTGTCACTGGGGAAACAATGACAATTCATCCTGAACACCTGACGACAAACTTATCTCGTTTTG GGGCAAATAGGTATTTAGCTGCACGAAGAGTTATACAGTCAGTTCGGATTGGCATTGTTGCTATCTCATCACAAGTCTTA CACCAATCATAA
Upstream 100 bases:
>100_bases CGGATGGCTAATAGATGAGATTTTGTAGGGTAACTCTTTCGTAAAGCCCCGAATGAACAAACGAGTGCTAAATTGGAATG AGGCAAAAGCTTTTAGCCAG
Downstream 100 bases:
>100_bases ATGGACTAACTTTATTTGTATTGTTAGACCGCATCACAGACTTGATTTCTACCTGCTCGCTTGGCTTGCATCATGGCCTG ATCGGCATTATTGAATAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MNSSMVVKIVIVATVTVGGMDAAVEPIGTYSRRVTGETMTIHPEHLTTNLSRFGANRYLAARRVIQSVRIGIVAISSQVL HQS
Sequences:
>Translated_83_residues MNSSMVVKIVIVATVTVGGMDAAVEPIGTYSRRVTGETMTIHPEHLTTNLSRFGANRYLAARRVIQSVRIGIVAISSQVL HQS >Mature_83_residues MNSSMVVKIVIVATVTVGGMDAAVEPIGTYSRRVTGETMTIHPEHLTTNLSRFGANRYLAARRVIQSVRIGIVAISSQVL HQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8966; Mature: 8966
Theoretical pI: Translated: 11.26; Mature: 11.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSSMVVKIVIVATVTVGGMDAAVEPIGTYSRRVTGETMTIHPEHLTTNLSRFGANRYLA CCCCEEEEEEEEEEEEECCCCCCCCCCCCCCEECCCCEEEECHHHHHHHHHHHCCHHHHH ARRVIQSVRIGIVAISSQVLHQS HHHHHHHHHHHHHEECHHHHCCC >Mature Secondary Structure MNSSMVVKIVIVATVTVGGMDAAVEPIGTYSRRVTGETMTIHPEHLTTNLSRFGANRYLA CCCCEEEEEEEEEEEEECCCCCCCCCCCCCCEECCCCEEEECHHHHHHHHHHHCCHHHHH ARRVIQSVRIGIVAISSQVLHQS HHHHHHHHHHHHHEECHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA