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The map label for this gene is yecM [H]

Identifier: 117920864

GI number: 117920864

Start: 2904223

End: 2904831

Strand: Direct

Name: yecM [H]

Synonym: Shewana3_2421

Alternate gene names: 117920864

Gene position: 2904223-2904831 (Clockwise)

Preceding gene: 117920863

Following gene: 117920865

Centisome position: 58.41

GC content: 48.28

Gene sequence:

>609_bases
ATGTCAACAATCACTACAGAGGCTGAAGTATTCAGCTACGCCACATTAGAGCTGACATGGCCAGAGTTTGAGGCGAAAAT
CCTCGCATTTCTCGACCAATTAGGCTTAGCGGACAAGGCGCTGCATTGCGATCATGTCGCCTTGAGAGTGAACAGCATAG
CTGCTGCCGATGCACTCAAGCAGGCCTTTAACGCACGCGGGCGGATCATCTCGGATAATCAAATTAATGGCCGCACTATC
CTGATTATCGAACTTGATAAGCCATTAATATTAGGTAGCTTTAACATCGACTGCGTCGAATTACCCTATCCCGGTGATAC
CCTTTATCCCCAAGAAGGTTGGGAACATATCGAACTGGTACAGCCATCCACTGCACAGGACTGCGACAGCCTAAGCCAAG
AACTAGCTCAGTTGAGCCCATCACTTGTGCCATTACTCCAAGGGAAAACGGCATCCTTAACCGAAGCGCCGATAAAAGTG
AAATTCAGCTCGCCCAAGGGTGATAAAGAACGTTTAGCCAACCCCACCATTGCCTTTAAACAAGCCGATATTTGTATCAA
AATTCACCCGCACAGCATAAAAGCGGTTATCGCCAGCGAACAGGCGTAG

Upstream 100 bases:

>100_bases
CATCGAGATTTGGCCCTAAGCGCTAAGCTTGATTAGCCCTATGCGACTCAACGCCCAGTCAAATGGGCGTTTTTGTTTGT
ACCCGTTTTAAGGATGTTTT

Downstream 100 bases:

>100_bases
AGGAAACAGCAATCCATTTGCGCCCCTTCTCGAGAAGAGTGTGAGCCCCATACCAATTACTGACAATCGCCTGCACAAAA
CAGGCAGTTTGAGAAAAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSTITTEAEVFSYATLELTWPEFEAKILAFLDQLGLADKALHCDHVALRVNSIAAADALKQAFNARGRIISDNQINGRTI
LIIELDKPLILGSFNIDCVELPYPGDTLYPQEGWEHIELVQPSTAQDCDSLSQELAQLSPSLVPLLQGKTASLTEAPIKV
KFSSPKGDKERLANPTIAFKQADICIKIHPHSIKAVIASEQA

Sequences:

>Translated_202_residues
MSTITTEAEVFSYATLELTWPEFEAKILAFLDQLGLADKALHCDHVALRVNSIAAADALKQAFNARGRIISDNQINGRTI
LIIELDKPLILGSFNIDCVELPYPGDTLYPQEGWEHIELVQPSTAQDCDSLSQELAQLSPSLVPLLQGKTASLTEAPIKV
KFSSPKGDKERLANPTIAFKQADICIKIHPHSIKAVIASEQA
>Mature_201_residues
STITTEAEVFSYATLELTWPEFEAKILAFLDQLGLADKALHCDHVALRVNSIAAADALKQAFNARGRIISDNQINGRTIL
IIELDKPLILGSFNIDCVELPYPGDTLYPQEGWEHIELVQPSTAQDCDSLSQELAQLSPSLVPLLQGKTASLTEAPIKVK
FSSPKGDKERLANPTIAFKQADICIKIHPHSIKAVIASEQA

Specific function: Unknown

COG id: COG3102

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1582/HI_1581 [H]

Homologues:

Organism=Escherichia coli, GI87081996, Length=182, Percent_Identity=38.4615384615385, Blast_Score=128, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010393 [H]

Pfam domain/function: PF06185 YecM [H]

EC number: NA

Molecular weight: Translated: 22075; Mature: 21944

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTITTEAEVFSYATLELTWPEFEAKILAFLDQLGLADKALHCDHVALRVNSIAAADALK
CCCCCCCHHHEEEEEEEEECCHHHHHHHHHHHHCCCCCHHCCCCEEEEEEHHHHHHHHHH
QAFNARGRIISDNQINGRTILIIELDKPLILGSFNIDCVELPYPGDTLYPQEGWEHIELV
HHHCCCCCEEECCCCCCEEEEEEECCCCEEEECCCCEEEECCCCCCCCCCCCCCCEEEEE
QPSTAQDCDSLSQELAQLSPSLVPLLQGKTASLTEAPIKVKFSSPKGDKERLANPTIAFK
CCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCCCCHHHHHCCCEEEEE
QADICIKIHPHSIKAVIASEQA
ECCEEEEECCCCEEEEEECCCC
>Mature Secondary Structure 
STITTEAEVFSYATLELTWPEFEAKILAFLDQLGLADKALHCDHVALRVNSIAAADALK
CCCCCCHHHEEEEEEEEECCHHHHHHHHHHHHCCCCCHHCCCCEEEEEEHHHHHHHHHH
QAFNARGRIISDNQINGRTILIIELDKPLILGSFNIDCVELPYPGDTLYPQEGWEHIELV
HHHCCCCCEEECCCCCCEEEEEEECCCCEEEECCCCEEEECCCCCCCCCCCCCCCEEEEE
QPSTAQDCDSLSQELAQLSPSLVPLLQGKTASLTEAPIKVKFSSPKGDKERLANPTIAFK
CCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCCCCHHHHHCCCEEEEE
QADICIKIHPHSIKAVIASEQA
ECCEEEEECCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 10493123 [H]