| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920865
Identifier: 117920865
GI number: 117920865
Start: 2905067
End: 2905327
Strand: Direct
Name: 117920865
Synonym: Shewana3_2422
Alternate gene names: NA
Gene position: 2905067-2905327 (Clockwise)
Preceding gene: 117920864
Following gene: 117920868
Centisome position: 58.43
GC content: 45.98
Gene sequence:
>261_bases ATGAAACCCCACAAGCATGAAGCACAGCTACTCAAACTCGCCTTGGATATTGGGATCGGCTACGCCAAAAAACGTGGTTT TGACGACTTTGATAAGGGTGTGTCGCCCAAGGATAAGGTGGAATGTATTTATCGGCTTTTAGTGACCGATAATTTGATCC AACCCTTAGCCAAAGACAAGGAAGATGGCCCGAATATGAAGCACAAGCTGGTACTGTGGATCATCCGACATCTGCCGACA GATCACCCGTTATTGCAATAA
Upstream 100 bases:
>100_bases ACTATTAACGCTTTGATTCGCCATTAGGTTTTATCGATTTTTGTGTTATCGAACACGGGAATGCCAGCAGGCTTCCCCTG TTATTATAAGGACGCAGCGC
Downstream 100 bases:
>100_bases CCGCTCAAGCATAAAACAGGGCGCCAATGATTAGGCGCCCAGTTAGGAGATAAGAGATAGACTAAGAGATAGTCGCGGGA GTTACTTCGCGACTTTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MKPHKHEAQLLKLALDIGIGYAKKRGFDDFDKGVSPKDKVECIYRLLVTDNLIQPLAKDKEDGPNMKHKLVLWIIRHLPT DHPLLQ
Sequences:
>Translated_86_residues MKPHKHEAQLLKLALDIGIGYAKKRGFDDFDKGVSPKDKVECIYRLLVTDNLIQPLAKDKEDGPNMKHKLVLWIIRHLPT DHPLLQ >Mature_86_residues MKPHKHEAQLLKLALDIGIGYAKKRGFDDFDKGVSPKDKVECIYRLLVTDNLIQPLAKDKEDGPNMKHKLVLWIIRHLPT DHPLLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9907; Mature: 9907
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPHKHEAQLLKLALDIGIGYAKKRGFDDFDKGVSPKDKVECIYRLLVTDNLIQPLAKDK CCCCHHHHHHHHHHHHHCCCHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC EDGPNMKHKLVLWIIRHLPTDHPLLQ CCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKPHKHEAQLLKLALDIGIGYAKKRGFDDFDKGVSPKDKVECIYRLLVTDNLIQPLAKDK CCCCHHHHHHHHHHHHHCCCHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC EDGPNMKHKLVLWIIRHLPTDHPLLQ CCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA