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The map label for this gene is yifE [H]

Identifier: 117920847

GI number: 117920847

Start: 2882348

End: 2882800

Strand: Direct

Name: yifE [H]

Synonym: Shewana3_2404

Alternate gene names: 117920847

Gene position: 2882348-2882800 (Clockwise)

Preceding gene: 117920845

Following gene: 117920848

Centisome position: 57.97

GC content: 48.57

Gene sequence:

>453_bases
ATGTCTGAACAGTCTTTTTCAAACGCTAACAAGGGTTCTGAGACGGTGAACGGCTCAGCTGCCAGCTTTGTATCCCATAA
ACGTTTTTATGACGATGCCAATTTCCCGAAAGGTTTTAAGCGCAGTGGCGACTTCACCAGTAAAGAAGCCGAACTGCTTG
AAATACATGGCCATGCCATGAAAAATCTCGACGAAGGCAAGACACTCCCCGTCACCGCCGATGAAGCGCAATTTGTCGAA
GTCATCAAAGGAAACATCGCTCCCAGTAGCTTGTTAGAGCAGATCTGGTTAAAGTACCGCAAACTCGCCCTAGGTAAACC
CTTTTATGCCGTGGTTGGCACAGTACATTTGCCCCCCACTAAGCCTGAGGCCGAGCCCGAAGCGGCATTCGATGTGGATG
TCGAAATTGACGATGATGTTCAGGATGAAGCTGAACCCGAGGATAAAGAATGA

Upstream 100 bases:

>100_bases
TTGACCAACATTGGCAAATTTTTTTGATTTATAAATCAATAATACTAGCCAATACTCCAGTTGCAAATCTTTGTATATCA
AAAACTAGAAGGTAACAGCC

Downstream 100 bases:

>100_bases
AAATGAAGGTTTGCGATTAAATGCGTGGGTGGATTTTATATAAAGAAACCGCGACTCAGCTAAAACCTGAATTGTATGAA
ATTGAACGTCTATTGGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MSEQSFSNANKGSETVNGSAASFVSHKRFYDDANFPKGFKRSGDFTSKEAELLEIHGHAMKNLDEGKTLPVTADEAQFVE
VIKGNIAPSSLLEQIWLKYRKLALGKPFYAVVGTVHLPPTKPEAEPEAAFDVDVEIDDDVQDEAEPEDKE

Sequences:

>Translated_150_residues
MSEQSFSNANKGSETVNGSAASFVSHKRFYDDANFPKGFKRSGDFTSKEAELLEIHGHAMKNLDEGKTLPVTADEAQFVE
VIKGNIAPSSLLEQIWLKYRKLALGKPFYAVVGTVHLPPTKPEAEPEAAFDVDVEIDDDVQDEAEPEDKE
>Mature_149_residues
SEQSFSNANKGSETVNGSAASFVSHKRFYDDANFPKGFKRSGDFTSKEAELLEIHGHAMKNLDEGKTLPVTADEAQFVEV
IKGNIAPSSLLEQIWLKYRKLALGKPFYAVVGTVHLPPTKPEAEPEAAFDVDVEIDDDVQDEAEPEDKE

Specific function: Unknown

COG id: COG3085

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0438 family [H]

Homologues:

Organism=Escherichia coli, GI2367277, Length=95, Percent_Identity=44.2105263157895, Blast_Score=87, Evalue=4e-19,

Paralogues:

None

Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007335 [H]

Pfam domain/function: PF04219 DUF413 [H]

EC number: NA

Molecular weight: Translated: 16543; Mature: 16412

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQSFSNANKGSETVNGSAASFVSHKRFYDDANFPKGFKRSGDFTSKEAELLEIHGHAM
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
KNLDEGKTLPVTADEAQFVEVIKGNIAPSSLLEQIWLKYRKLALGKPFYAVVGTVHLPPT
HCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCC
KPEAEPEAAFDVDVEIDDDVQDEAEPEDKE
CCCCCCCCEEEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SEQSFSNANKGSETVNGSAASFVSHKRFYDDANFPKGFKRSGDFTSKEAELLEIHGHAM
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
KNLDEGKTLPVTADEAQFVEVIKGNIAPSSLLEQIWLKYRKLALGKPFYAVVGTVHLPPT
HCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCC
KPEAEPEAAFDVDVEIDDDVQDEAEPEDKE
CCCCCCCCEEEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]