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The map label for this gene is rimK1 [H]

Identifier: 117920717

GI number: 117920717

Start: 2737428

End: 2738327

Strand: Reverse

Name: rimK1 [H]

Synonym: Shewana3_2274

Alternate gene names: 117920717

Gene position: 2738327-2737428 (Counterclockwise)

Preceding gene: 117920718

Following gene: 117920716

Centisome position: 55.07

GC content: 50.11

Gene sequence:

>900_bases
ATGAGAATCGCGATCCTATCGCAAGGGCCTGAGCTATATTCCACAAAGCGACTCGTTGAGGCTGCGACATTACGTGGTCA
CGAAGTCAAAGTGATCAACCCGCTCGAATGCTATATGAACATCAATATGCGCCAGTCGAGCATTCATATTGGTGGGGAAG
AGTTACCGCCTTTTGATGCGGTTATTCCGCGTATCGGTGCTTCGATTACTTTTTATGGCTCAGCTGTGCTGCGCCAGTTT
GAGATGATGGGCGTATATGCGCTCAATGATTCTGTCGGCATTTCTCGCTCGCGCGATAAGCTACGTTCGATGCAGTTAAT
GTCACGCCGTGGTATCGGTCTGCCAATTACTGGCTTTGCCAATAAGCCGAGTGATATTCCTGATCTCATCGACATGGTGG
GTGGCGCGCCGTTAGTGATCAAATTGCTTGAGGGCACGCAGGGCATTGGGGTGGTGTTAGCCGAAACCCGCAAGGCGGCA
GAGAGTGTGATTGAAGCTTTTATGGGATTAAAAGCCAACATCATGGTGCAGGAATACATTAAAGAAGCCAATGGCGCCGA
CATTCGCTGCTTTGTGCTGGGCGATAAAGTGATTGCGGCAATGAAACGCCAAGCTATGCCAGGGGAGTTTCGCTCAAACT
TACACCGTGGCGGTACTGCAAGTTTAGTTAAATTGACCCCAGAAGAGCGTTCGGTGGCAATTCGTGCGGCCAAAACCATG
GGACTCAATGTCGCTGGGGTGGATTTATTGCGTTCTAATCATGGCCCTGTGGTGATGGAAGTGAATTCTTCGCCAGGCCT
TGAAGGGATAGAAGGGGCAACCGCAAAAGATGTCGCCGGTGCCATTATTGAGTTTGTTGAAAAGAATGCCCTCAAGGCAA
AAAAGCCCACTCAAGCGTAG

Upstream 100 bases:

>100_bases
TCTGGCGCCCAGCATTTGCGCAAGCAATAATTGCCATGATTGATTTATCCTAATCCGAGCGTATGATGCGCTCAAAATGA
AATGGTTGTCGGAGACCAAA

Downstream 100 bases:

>100_bases
AGTTAAGCCGCGATTAGGCTACACTCAGGAGAACAACGTTTAGCTACAGATGGCATAAGGGGGAGAGGATGTCGTTAAAA
TGGATTGATTCACTAGATAT

Product: SSU ribosomal protein S6P modification protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MRIAILSQGPELYSTKRLVEAATLRGHEVKVINPLECYMNINMRQSSIHIGGEELPPFDAVIPRIGASITFYGSAVLRQF
EMMGVYALNDSVGISRSRDKLRSMQLMSRRGIGLPITGFANKPSDIPDLIDMVGGAPLVIKLLEGTQGIGVVLAETRKAA
ESVIEAFMGLKANIMVQEYIKEANGADIRCFVLGDKVIAAMKRQAMPGEFRSNLHRGGTASLVKLTPEERSVAIRAAKTM
GLNVAGVDLLRSNHGPVVMEVNSSPGLEGIEGATAKDVAGAIIEFVEKNALKAKKPTQA

Sequences:

>Translated_299_residues
MRIAILSQGPELYSTKRLVEAATLRGHEVKVINPLECYMNINMRQSSIHIGGEELPPFDAVIPRIGASITFYGSAVLRQF
EMMGVYALNDSVGISRSRDKLRSMQLMSRRGIGLPITGFANKPSDIPDLIDMVGGAPLVIKLLEGTQGIGVVLAETRKAA
ESVIEAFMGLKANIMVQEYIKEANGADIRCFVLGDKVIAAMKRQAMPGEFRSNLHRGGTASLVKLTPEERSVAIRAAKTM
GLNVAGVDLLRSNHGPVVMEVNSSPGLEGIEGATAKDVAGAIIEFVEKNALKAKKPTQA
>Mature_299_residues
MRIAILSQGPELYSTKRLVEAATLRGHEVKVINPLECYMNINMRQSSIHIGGEELPPFDAVIPRIGASITFYGSAVLRQF
EMMGVYALNDSVGISRSRDKLRSMQLMSRRGIGLPITGFANKPSDIPDLIDMVGGAPLVIKLLEGTQGIGVVLAETRKAA
ESVIEAFMGLKANIMVQEYIKEANGADIRCFVLGDKVIAAMKRQAMPGEFRSNLHRGGTASLVKLTPEERSVAIRAAKTM
GLNVAGVDLLRSNHGPVVMEVNSSPGLEGIEGATAKDVAGAIIEFVEKNALKAKKPTQA

Specific function: Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 [H]

COG id: COG0189

COG function: function code HJ; Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

Organism=Homo sapiens, GI164663810, Length=215, Percent_Identity=29.3023255813954, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI134254462, Length=214, Percent_Identity=29.4392523364486, Blast_Score=85, Evalue=1e-16,
Organism=Escherichia coli, GI1787076, Length=290, Percent_Identity=67.5862068965517, Blast_Score=416, Evalue=1e-117,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR004666 [H]

Pfam domain/function: PF08443 RimK [H]

EC number: NA

Molecular weight: Translated: 32141; Mature: 32141

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAILSQGPELYSTKRLVEAATLRGHEVKVINPLECYMNINMRQSSIHIGGEELPPFDA
CEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECHHEEEEECCEEECEEEECCCCCCCHHH
VIPRIGASITFYGSAVLRQFEMMGVYALNDSVGISRSRDKLRSMQLMSRRGIGLPITGFA
HHHHHCCEEEEHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEECCCC
NKPSDIPDLIDMVGGAPLVIKLLEGTQGIGVVLAETRKAAESVIEAFMGLKANIMVQEYI
CCCCCCHHHHHHHCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHH
KEANGADIRCFVLGDKVIAAMKRQAMPGEFRSNLHRGGTASLVKLTPEERSVAIRAAKTM
HHCCCCEEEEEEECHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECCCHHHEEEEEHHHH
GLNVAGVDLLRSNHGPVVMEVNSSPGLEGIEGATAKDVAGAIIEFVEKNALKAKKPTQA
CCCEEHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRIAILSQGPELYSTKRLVEAATLRGHEVKVINPLECYMNINMRQSSIHIGGEELPPFDA
CEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECHHEEEEECCEEECEEEECCCCCCCHHH
VIPRIGASITFYGSAVLRQFEMMGVYALNDSVGISRSRDKLRSMQLMSRRGIGLPITGFA
HHHHHCCEEEEHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEECCCC
NKPSDIPDLIDMVGGAPLVIKLLEGTQGIGVVLAETRKAAESVIEAFMGLKANIMVQEYI
CCCCCCHHHHHHHCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHH
KEANGADIRCFVLGDKVIAAMKRQAMPGEFRSNLHRGGTASLVKLTPEERSVAIRAAKTM
HHCCCCEEEEEEECHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECCCHHHEEEEEHHHH
GLNVAGVDLLRSNHGPVVMEVNSSPGLEGIEGATAKDVAGAIIEFVEKNALKAKKPTQA
CCCEEHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Glu; Ribosomal protein S6 [C]

Specific reaction: Catalyzes the addition of glutamic acids to the carboxyl end of ribosomal protein S6 [C]

General reaction: Ligases; Forming Carbon-Nitrogen Bonds; Acid-D-Amino-Acid Ligases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA