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The map label for this gene is fdx [H]

Identifier: 117920718

GI number: 117920718

Start: 2738483

End: 2738818

Strand: Reverse

Name: fdx [H]

Synonym: Shewana3_2275

Alternate gene names: 117920718

Gene position: 2738818-2738483 (Counterclockwise)

Preceding gene: 117920719

Following gene: 117920717

Centisome position: 55.08

GC content: 49.4

Gene sequence:

>336_bases
ATGCCCCAGTTAGTCTTTCTTCCCCATGCTGAGTTATGTCCCGATGGCGCAGTGTTGGAAGCCAAAGTAGGTGAAACGAT
TCTCGATGTGGCGCTGCGTAACGGCATCAATATCGAGCATGCCTGTGAAAAATCCTGTGCCTGCACCACATGCCACTGCA
TCGTGCGTGAAGGCTTTGATGAGCTAGAGCCAAGCGATGAGCTTGAAGATGATATGCTCGATAAGGCTTGGGGACTCGAG
CCTGAGAGCCGTTTGTCTTGCCAAGCTAAAGTTGTCGATAGCGATCTGGTGATTGAAATTCCTAAGTACACTGTGAATAT
GGTGAGCGAAGGTTAA

Upstream 100 bases:

>100_bases
TCCTCGATGAACATACTCAGGATTTCGCCGCGAAGCGTATGGACAATTCTATTCGAGTGGCCTTTAAGGGTCAGTCAATT
GACAACATATAGGTGATGTG

Downstream 100 bases:

>100_bases
TCAAGCCGATGCGATAATATCGTCAAAAACCAGTCCATGTGACTGGTTTTTGGCTTCTGGCGCCCAGCATTTGCGCAAGC
AATAATTGCCATGATTGATT

Product: ferredoxin, 2Fe-2S type, ISC system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MPQLVFLPHAELCPDGAVLEAKVGETILDVALRNGINIEHACEKSCACTTCHCIVREGFDELEPSDELEDDMLDKAWGLE
PESRLSCQAKVVDSDLVIEIPKYTVNMVSEG

Sequences:

>Translated_111_residues
MPQLVFLPHAELCPDGAVLEAKVGETILDVALRNGINIEHACEKSCACTTCHCIVREGFDELEPSDELEDDMLDKAWGLE
PESRLSCQAKVVDSDLVIEIPKYTVNMVSEG
>Mature_110_residues
PQLVFLPHAELCPDGAVLEAKVGETILDVALRNGINIEHACEKSCACTTCHCIVREGFDELEPSDELEDDMLDKAWGLEP
ESRLSCQAKVVDSDLVIEIPKYTVNMVSEG

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI72534754, Length=97, Percent_Identity=43.298969072165, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1788874, Length=110, Percent_Identity=79.0909090909091, Blast_Score=185, Evalue=8e-49,
Organism=Caenorhabditis elegans, GI17544202, Length=97, Percent_Identity=40.2061855670103, Blast_Score=64, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6325004, Length=88, Percent_Identity=48.8636363636364, Blast_Score=70, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24661503, Length=96, Percent_Identity=42.7083333333333, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR011536
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 12189; Mature: 12058

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
6.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQLVFLPHAELCPDGAVLEAKVGETILDVALRNGINIEHACEKSCACTTCHCIVREGFD
CCCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHCCHH
ELEPSDELEDDMLDKAWGLEPESRLSCQAKVVDSDLVIEIPKYTVNMVSEG
HCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEECCCCEEEEECCC
>Mature Secondary Structure 
PQLVFLPHAELCPDGAVLEAKVGETILDVALRNGINIEHACEKSCACTTCHCIVREGFD
CCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHCCHH
ELEPSDELEDDMLDKAWGLEPESRLSCQAKVVDSDLVIEIPKYTVNMVSEG
HCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEECCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8809750; 10984043 [H]