| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920698
Identifier: 117920698
GI number: 117920698
Start: 2717932
End: 2718327
Strand: Direct
Name: 117920698
Synonym: Shewana3_2255
Alternate gene names: NA
Gene position: 2717932-2718327 (Clockwise)
Preceding gene: 117920697
Following gene: 117920699
Centisome position: 54.66
GC content: 46.72
Gene sequence:
>396_bases ATGCGCATGACCTTAGCCGTTCACCTGCGGCAGTATACCATCCATAGTTTTAGTCCTAATGCTCAATTACCTAGCGAAGT CTTTGCCGAAGAAGTGTACTTTATCGGCCGAACCGAGGAAGGGCTGACAGTCGTGGTATCGAGTGAACTTGAGCTCGACA GTTTAGAGCAAGAACCCCATTGGTGCTGTTTTGAAGTCTTAGGCCCGCTGGGATTTTCGATGACAGGCATTTTATCGAAA ATATCCGGTACCTTAGCCGATGTGCAGATCAGTATTTTTGCCCTTTCCACCTTCGATACCGACTATATTTTGGTCAAGAA AAATTGCCTCCAAAGCGCCGTTGCCGCCTTAAAAAAGGCGGGTTACAAGATTATTGAGTCGAACGAAGCGCCATAA
Upstream 100 bases:
>100_bases TTTAAAATACTTCACTCAACTAGGTTAGATGCAATCTAGACGGGTATCCATGCTATAAACTAGGATATGACTTTACCCTA TTGCCGATTGAGGAACGTCC
Downstream 100 bases:
>100_bases TATTGCTAAAGAGTTAAACCACTATGTACGAAAAATCTGTCACTATCACCGCAAAACATGGTATTCATACCCGCCCAGCC GCCCTGTTAGTGAAAGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MRMTLAVHLRQYTIHSFSPNAQLPSEVFAEEVYFIGRTEEGLTVVVSSELELDSLEQEPHWCCFEVLGPLGFSMTGILSK ISGTLADVQISIFALSTFDTDYILVKKNCLQSAVAALKKAGYKIIESNEAP
Sequences:
>Translated_131_residues MRMTLAVHLRQYTIHSFSPNAQLPSEVFAEEVYFIGRTEEGLTVVVSSELELDSLEQEPHWCCFEVLGPLGFSMTGILSK ISGTLADVQISIFALSTFDTDYILVKKNCLQSAVAALKKAGYKIIESNEAP >Mature_131_residues MRMTLAVHLRQYTIHSFSPNAQLPSEVFAEEVYFIGRTEEGLTVVVSSELELDSLEQEPHWCCFEVLGPLGFSMTGILSK ISGTLADVQISIFALSTFDTDYILVKKNCLQSAVAALKKAGYKIIESNEAP
Specific function: Unknown
COG id: COG3603
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14476; Mature: 14476
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMTLAVHLRQYTIHSFSPNAQLPSEVFAEEVYFIGRTEEGLTVVVSSELELDSLEQEPH CCEEEEEEEEEEEEECCCCCCCCCHHHHHHHEEEEECCCCCEEEEEECCCCCCCCCCCCC WCCFEVLGPLGFSMTGILSKISGTLADVQISIFALSTFDTDYILVKKNCLQSAVAALKKA EEHHHHHCCCCCHHHHHHHHHCCCCEEEEEEEEEEEECCCCEEEEEHHHHHHHHHHHHHC GYKIIESNEAP CCEEEECCCCC >Mature Secondary Structure MRMTLAVHLRQYTIHSFSPNAQLPSEVFAEEVYFIGRTEEGLTVVVSSELELDSLEQEPH CCEEEEEEEEEEEEECCCCCCCCCHHHHHHHEEEEECCCCCEEEEEECCCCCCCCCCCCC WCCFEVLGPLGFSMTGILSKISGTLADVQISIFALSTFDTDYILVKKNCLQSAVAALKKA EEHHHHHCCCCCHHHHHHHHHCCCCEEEEEEEEEEEECCCCEEEEEHHHHHHHHHHHHHC GYKIIESNEAP CCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA