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The map label for this gene is mcp4 [H]

Identifier: 117920697

GI number: 117920697

Start: 2716134

End: 2717771

Strand: Direct

Name: mcp4 [H]

Synonym: Shewana3_2254

Alternate gene names: 117920697

Gene position: 2716134-2717771 (Clockwise)

Preceding gene: 117920694

Following gene: 117920698

Centisome position: 54.63

GC content: 50.0

Gene sequence:

>1638_bases
ATGATCACATTCTTGCGCCGATTCACTATTCTCCAACGACTGATGATGATGTTAGTGATGGCGGCTATAGGTACTGTGTG
TTTTGCGAGTTTTTCCATTAAAGAGCAATACAGCAATCTTATTGAGCAAAAGTGGCAACAGATTGATGGCCAGCTCGGCA
GCCTCCTCAGTGTAATCGATATTCATCGCCAAGATGCCCTAAGCGGCAAGCTGTCAGAAGCAGAAGCGCAACAAGCGGCG
GCAAACCTGATTGACCAAACCCGTTACGCCGGTGTCGGCTACTTTATTGTGATCGATGATAATAATCAGATCCTCGCCCA
TGGCGAACGCAGCGATCTTATTGGCACATCGGCGCTCAATTTTAAGCTGCAAAATGGCACGAATCCCCTTGCCACTATGT
TGCCGCTAGCCCGCCAAAACGGCAAAACCATGCTCGAATATCCAATTGCAAATCCCGTGTCGAAGAACATTGAAGATAAG
CTGGTCGAAGCCCGTTATTATCCTGAATGGGGCTGGACGCTCATCACTGGTGCTTACTTAAGCGATGTGAAACAAAGTCT
TAAAGCCGTGATCATCGATTATCTGATTATCATGTTTTTAATTTCTGTACCGATTTTCGCGTTTTTCCTGGTGCTGAATC
ACTCCATTACCTCACCGTTAAACGACGCTATCGATGCGCTTGAGGATATCGCCCAAGGCGAAGGCGACCTTAGCCAGCGT
TTAAGCACCCAAGGCAAGGATGAAGTGGCGCACCTTGCCCACGCCTTTAACCTGTTTGCCCAGAAAATTGGCGACATGGT
GGGTCATTTACAGCCATTGGGCCAGTCCCTCGACAATGATGCCAAGCAGTTAATGCTGGCCGTTGAAGAGTCGAACCAAA
GCGCAGAGCATATCCACCGTGAAACCGGTAGCGTAGCCACCGCCGTGAATCAAATGCTTTCAACCACCCATGAGATGGCG
AGCAACACCCAGCAGGCTGCCGATGCAGCCAACAGTGTGAAGAATCAGGCGCAGCAAAGCCAAGCGGTAATCGATGATAC
GGTGCGTGATACCGAAAAACTGGTGCAAGAGCTAAGGGCATCAGAAGTGATCACCCAAAAACTCGGACAATCCTCGGCGC
AAATTGGCAGTATCCTCGATGTCATTCGCTCTATTGCCGAACAAACGAACCTGTTAGCTCTCAATGCAGCCATCGAAGCC
GCCCGCGCGGGGAGCCATGGCCGCGGGTTTGCCGTGGTCGCCGATGAAGTGCGCGCACTGGCCAATCGCACCCAAGACTC
TACCAACGAGATCCAAAAAATCATCTCGGATATTCAAATGGGCGTGAACTCTGTAATGAAGAGTAATAGCCAAACACAGA
CTCAATCCGATGAATTACAAGCCAAAGCCCGCGAAGCGGGTAATGCCATGGCGGCGATTTTGCAGCTTATCGCCCATATC
AGCGATATGAACACCCAGCTCGCGAGTGCGACCGAGGAGCAGTCGCTGGTGACGGAGGAAATCAACCGCAATATCTGTAA
TATTTCGGAATTAACCGAAGTCTCAGTCAAAGCTAACGAAGGTAACAGCCGCGCGGCACAGTCATTGCAGGATATCAGCC
AAGATATGTCTCATACCTTAGGCCAATTCAAAATCTAG

Upstream 100 bases:

>100_bases
TTCTTAACGTCTTTACACGAAATAAACTCAAGTTTGATTCATTTGATACCGATTCGAAGGTATATTGGACACCATTCTTT
TTGCGCCTAAAGGACCCCAC

Downstream 100 bases:

>100_bases
TTCGCAGGACGAGATAAGCAACCGCCATAAAAGAGGACGTATTAGAACGTCCTCTTTTAGTTTAAAATACTTCACTCAAC
TAGGTTAGATGCAATCTAGA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MITFLRRFTILQRLMMMLVMAAIGTVCFASFSIKEQYSNLIEQKWQQIDGQLGSLLSVIDIHRQDALSGKLSEAEAQQAA
ANLIDQTRYAGVGYFIVIDDNNQILAHGERSDLIGTSALNFKLQNGTNPLATMLPLARQNGKTMLEYPIANPVSKNIEDK
LVEARYYPEWGWTLITGAYLSDVKQSLKAVIIDYLIIMFLISVPIFAFFLVLNHSITSPLNDAIDALEDIAQGEGDLSQR
LSTQGKDEVAHLAHAFNLFAQKIGDMVGHLQPLGQSLDNDAKQLMLAVEESNQSAEHIHRETGSVATAVNQMLSTTHEMA
SNTQQAADAANSVKNQAQQSQAVIDDTVRDTEKLVQELRASEVITQKLGQSSAQIGSILDVIRSIAEQTNLLALNAAIEA
ARAGSHGRGFAVVADEVRALANRTQDSTNEIQKIISDIQMGVNSVMKSNSQTQTQSDELQAKAREAGNAMAAILQLIAHI
SDMNTQLASATEEQSLVTEEINRNICNISELTEVSVKANEGNSRAAQSLQDISQDMSHTLGQFKI

Sequences:

>Translated_545_residues
MITFLRRFTILQRLMMMLVMAAIGTVCFASFSIKEQYSNLIEQKWQQIDGQLGSLLSVIDIHRQDALSGKLSEAEAQQAA
ANLIDQTRYAGVGYFIVIDDNNQILAHGERSDLIGTSALNFKLQNGTNPLATMLPLARQNGKTMLEYPIANPVSKNIEDK
LVEARYYPEWGWTLITGAYLSDVKQSLKAVIIDYLIIMFLISVPIFAFFLVLNHSITSPLNDAIDALEDIAQGEGDLSQR
LSTQGKDEVAHLAHAFNLFAQKIGDMVGHLQPLGQSLDNDAKQLMLAVEESNQSAEHIHRETGSVATAVNQMLSTTHEMA
SNTQQAADAANSVKNQAQQSQAVIDDTVRDTEKLVQELRASEVITQKLGQSSAQIGSILDVIRSIAEQTNLLALNAAIEA
ARAGSHGRGFAVVADEVRALANRTQDSTNEIQKIISDIQMGVNSVMKSNSQTQTQSDELQAKAREAGNAMAAILQLIAHI
SDMNTQLASATEEQSLVTEEINRNICNISELTEVSVKANEGNSRAAQSLQDISQDMSHTLGQFKI
>Mature_545_residues
MITFLRRFTILQRLMMMLVMAAIGTVCFASFSIKEQYSNLIEQKWQQIDGQLGSLLSVIDIHRQDALSGKLSEAEAQQAA
ANLIDQTRYAGVGYFIVIDDNNQILAHGERSDLIGTSALNFKLQNGTNPLATMLPLARQNGKTMLEYPIANPVSKNIEDK
LVEARYYPEWGWTLITGAYLSDVKQSLKAVIIDYLIIMFLISVPIFAFFLVLNHSITSPLNDAIDALEDIAQGEGDLSQR
LSTQGKDEVAHLAHAFNLFAQKIGDMVGHLQPLGQSLDNDAKQLMLAVEESNQSAEHIHRETGSVATAVNQMLSTTHEMA
SNTQQAADAANSVKNQAQQSQAVIDDTVRDTEKLVQELRASEVITQKLGQSSAQIGSILDVIRSIAEQTNLLALNAAIEA
ARAGSHGRGFAVVADEVRALANRTQDSTNEIQKIISDIQMGVNSVMKSNSQTQTQSDELQAKAREAGNAMAAILQLIAHI
SDMNTQLASATEEQSLVTEEINRNICNISELTEVSVKANEGNSRAAQSLQDISQDMSHTLGQFKI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=318, Percent_Identity=30.5031446540881, Blast_Score=128, Evalue=8e-31,
Organism=Escherichia coli, GI1787690, Length=369, Percent_Identity=30.3523035230352, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1788195, Length=296, Percent_Identity=29.3918918918919, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1788194, Length=357, Percent_Identity=26.0504201680672, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1789453, Length=355, Percent_Identity=25.9154929577465, Blast_Score=88, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 59522; Mature: 59522

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITFLRRFTILQRLMMMLVMAAIGTVCFASFSIKEQYSNLIEQKWQQIDGQLGSLLSVID
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHRQDALSGKLSEAEAQQAAANLIDQTRYAGVGYFIVIDDNNQILAHGERSDLIGTSALN
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEECCCCCCCCCCHHEE
FKLQNGTNPLATMLPLARQNGKTMLEYPIANPVSKNIEDKLVEARYYPEWGWTLITGAYL
EEECCCCCHHHHHHHHHHCCCCEEEEECCCCCHHCCHHHHHHHHHCCCCCCHHHHHHHHH
SDVKQSLKAVIIDYLIIMFLISVPIFAFFLVLNHSITSPLNDAIDALEDIAQGEGDLSQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHH
LSTQGKDEVAHLAHAFNLFAQKIGDMVGHLQPLGQSLDNDAKQLMLAVEESNQSAEHIHR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHH
ETGSVATAVNQMLSTTHEMASNTQQAADAANSVKNQAQQSQAVIDDTVRDTEKLVQELRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEVITQKLGQSSAQIGSILDVIRSIAEQTNLLALNAAIEAARAGSHGRGFAVVADEVRAL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
ANRTQDSTNEIQKIISDIQMGVNSVMKSNSQTQTQSDELQAKAREAGNAMAAILQLIAHI
HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SDMNTQLASATEEQSLVTEEINRNICNISELTEVSVKANEGNSRAAQSLQDISQDMSHTL
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHH
GQFKI
HCCCC
>Mature Secondary Structure
MITFLRRFTILQRLMMMLVMAAIGTVCFASFSIKEQYSNLIEQKWQQIDGQLGSLLSVID
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHRQDALSGKLSEAEAQQAAANLIDQTRYAGVGYFIVIDDNNQILAHGERSDLIGTSALN
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEECCCCCCCCCCHHEE
FKLQNGTNPLATMLPLARQNGKTMLEYPIANPVSKNIEDKLVEARYYPEWGWTLITGAYL
EEECCCCCHHHHHHHHHHCCCCEEEEECCCCCHHCCHHHHHHHHHCCCCCCHHHHHHHHH
SDVKQSLKAVIIDYLIIMFLISVPIFAFFLVLNHSITSPLNDAIDALEDIAQGEGDLSQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHH
LSTQGKDEVAHLAHAFNLFAQKIGDMVGHLQPLGQSLDNDAKQLMLAVEESNQSAEHIHR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHH
ETGSVATAVNQMLSTTHEMASNTQQAADAANSVKNQAQQSQAVIDDTVRDTEKLVQELRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEVITQKLGQSSAQIGSILDVIRSIAEQTNLLALNAAIEAARAGSHGRGFAVVADEVRAL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
ANRTQDSTNEIQKIISDIQMGVNSVMKSNSQTQTQSDELQAKAREAGNAMAAILQLIAHI
HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SDMNTQLASATEEQSLVTEEINRNICNISELTEVSVKANEGNSRAAQSLQDISQDMSHTL
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHH
GQFKI
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]