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The map label for this gene is dinG [H]

Identifier: 117920694

GI number: 117920694

Start: 2713015

End: 2713704

Strand: Direct

Name: dinG [H]

Synonym: Shewana3_2251

Alternate gene names: 117920694

Gene position: 2713015-2713704 (Clockwise)

Preceding gene: 117920693

Following gene: 117920697

Centisome position: 54.56

GC content: 48.26

Gene sequence:

>690_bases
ATGCCAACGTTTGAATGTCCTCTGCGACTTACGTTGATATGTGTGGAGCCTATGTCTAAAACGCCAACCTATTCGCCTGC
CAATACTGTGGTCGTACTCGATTTTGAAACTTCTGGGCTTTCACCCAATCAAGGAGCACGTGCCATTGAAATTGGCGCAG
TATTAATTGAGCAAGGGCAAATTACCGCGCGCTTTTCTGAGTTAATGAATCCGGGGTTTCGGATAAACAGTTTTATTGAA
GATTACACAGGGATCAGCAATCAGATGCTCGCCCATGCGGCGCCCTGTGCAGAAGTCATGGCCCGCTTTGCTGAGTTTAT
CGGTAAACATCACTTAGTTGCCCACAATGCCACCTTCGATCAACGCTTTCTCGATGCCGAATTTTCCCAGATAGGCCATC
AATATCCCGGCCAATTTGGTTGTTCGTTACTGCTGGCAAGGCGCTTATATCCTGAGGCCATTAATCATCAACTCGCGACC
TTAGTTCGCCATAAACAGCTACCGACTAACGGAACTTATCACCGCGCCTTGGCAGATGCGGAAATGACCGGACATTTATG
GCTGCGCATGCTGGCTGATCTTAAACAAGGGTATGCGATCACTGAGCCGCCCTTTAGCCTGATGCAGAAAATTATGGCTA
AGACAAAGGCCGAGGTGCCTAAGTTTTTACGCCAATACGCCAGAGGTTAG

Upstream 100 bases:

>100_bases
GAGTACACTTAATTAACAATAGGTTAGCATCAGTGAATAGCGGTATTCTTTTGCTGTGGATGGATAAAACCGTGCGAACT
CGTGCCATGACTCTGTTACA

Downstream 100 bases:

>100_bases
CCCTATTTTGGTCCTCCATCAGGCAAAATGAGTATAACGCATCAATAAAAAAGCCGAGTGTTATCAATCACTCGGCTTAA
TGATTCAATCAAAATAGACG

Product: DNA polymerase III subunit epsilon

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MPTFECPLRLTLICVEPMSKTPTYSPANTVVVLDFETSGLSPNQGARAIEIGAVLIEQGQITARFSELMNPGFRINSFIE
DYTGISNQMLAHAAPCAEVMARFAEFIGKHHLVAHNATFDQRFLDAEFSQIGHQYPGQFGCSLLLARRLYPEAINHQLAT
LVRHKQLPTNGTYHRALADAEMTGHLWLRMLADLKQGYAITEPPFSLMQKIMAKTKAEVPKFLRQYARG

Sequences:

>Translated_229_residues
MPTFECPLRLTLICVEPMSKTPTYSPANTVVVLDFETSGLSPNQGARAIEIGAVLIEQGQITARFSELMNPGFRINSFIE
DYTGISNQMLAHAAPCAEVMARFAEFIGKHHLVAHNATFDQRFLDAEFSQIGHQYPGQFGCSLLLARRLYPEAINHQLAT
LVRHKQLPTNGTYHRALADAEMTGHLWLRMLADLKQGYAITEPPFSLMQKIMAKTKAEVPKFLRQYARG
>Mature_228_residues
PTFECPLRLTLICVEPMSKTPTYSPANTVVVLDFETSGLSPNQGARAIEIGAVLIEQGQITARFSELMNPGFRINSFIED
YTGISNQMLAHAAPCAEVMARFAEFIGKHHLVAHNATFDQRFLDAEFSQIGHQYPGQFGCSLLLARRLYPEAINHQLATL
VRHKQLPTNGTYHRALADAEMTGHLWLRMLADLKQGYAITEPPFSLMQKIMAKTKAEVPKFLRQYARG

Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1786409, Length=170, Percent_Identity=31.1764705882353, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR006054
- InterPro:   IPR006310
- InterPro:   IPR006055
- InterPro:   IPR013520
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650
- InterPro:   IPR006935
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00929 Exonuc_X-T; PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 25622; Mature: 25491

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTFECPLRLTLICVEPMSKTPTYSPANTVVVLDFETSGLSPNQGARAIEIGAVLIEQGQ
CCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEHHHHHHHCCC
ITARFSELMNPGFRINSFIEDYTGISNQMLAHAAPCAEVMARFAEFIGKHHLVAHNATFD
HHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCHH
QRFLDAEFSQIGHQYPGQFGCSLLLARRLYPEAINHQLATLVRHKQLPTNGTYHRALADA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
EMTGHLWLRMLADLKQGYAITEPPFSLMQKIMAKTKAEVPKFLRQYARG
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PTFECPLRLTLICVEPMSKTPTYSPANTVVVLDFETSGLSPNQGARAIEIGAVLIEQGQ
CCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEHHHHHHHCCC
ITARFSELMNPGFRINSFIEDYTGISNQMLAHAAPCAEVMARFAEFIGKHHLVAHNATFD
HHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCHH
QRFLDAEFSQIGHQYPGQFGCSLLLARRLYPEAINHQLATLVRHKQLPTNGTYHRALADA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
EMTGHLWLRMLADLKQGYAITEPPFSLMQKIMAKTKAEVPKFLRQYARG
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]