| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920683
Identifier: 117920683
GI number: 117920683
Start: 2693621
End: 2694487
Strand: Direct
Name: 117920683
Synonym: Shewana3_2240
Alternate gene names: NA
Gene position: 2693621-2694487 (Clockwise)
Preceding gene: 117920682
Following gene: 117920684
Centisome position: 54.17
GC content: 44.52
Gene sequence:
>867_bases TTGAGTTTATTGTTAATGCGTTGCCAGCCCCTTAGGCGGGCGTTAGCCAAATGTCGTAATGGAGATACCATGCAAGCCAA CTTGGAAAAATTCAAAAAAGATTTGAAGGCCCTTTCTAGAACGGGGGAGCTTTTGTTGTTGGCCATGCAGTATGACTGCC ATCCAGAGGCAGTTGAGAAAGCCTATGGAAAGGATTTCGCCGCTCTTAAAAAGGTACTGCCGAAATTTGGCACTGACTAT CAATCTTGGTATTCGGAATCGAAGGCTTTAATAAAGCAGCTTCTTCCCGACAGACTAGCTGATTTTGCGCGCCATTATGA GAAGCCCAAGCCTAGAAAAGATATAAGTTACGAGAACTACCGAATTGAAGATTATCTTCAAGGTTTGAGAGTTACACGAG GCTGGGAGAAAGAGAAAGTAGTGGGACCTGATGCGGCTATTCCTCACTTAGAGCAGCAACTAGCGATCGTCAAAGCAGTC TCATCTCGGTTTGAGAGTTCACTATTCGATATCCGCCAACTTGTACAGGCAGATTTGTTTGATTCAGAAATTGCTGCGGC TCAAGAGTTACTAAAGAGCGGTTTTTCCCGAGGTGCAGGTGCGGTAGCCGGAGTAGTATTAGAAAAGCACCTTGGCCAGG TGGCAGAAAACCATAACATCACAACTAGAAAGAAAAATCCAACGATTAGTGACTTTAATGACCTTTTGAAAGGCGCAGAA GTGCTAGATACGCCTGCGTGGCGCCAAATTCAGCGGCTTGGTGACATTCGAAATTTATGTGATCACAGTAAAGATCGCGA GCCAACCAAAGATGAGGTTCAGGAGCTCATAAGTGGCGTTGAAAAATTTACCAAAACACTTTTCTAA
Upstream 100 bases:
>100_bases CACTCAACGGGTAAAATTGGCATAACAAACGCCTCAAGAGGGACTGTCAACGAGCGGCGTTTCCAGTCCCAATGAGCCAC GGTGGTTACGGTTGTTGTGA
Downstream 100 bases:
>100_bases AAAGGCTAACAAGTCGCTCGTGTGGGACGCTGTGCCGCTGCGCGTCACGCGCCCCACAGCTTATCGTTAGGGCAATGGAG TACTAAGTACCATGTCACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MSLLLMRCQPLRRALAKCRNGDTMQANLEKFKKDLKALSRTGELLLLAMQYDCHPEAVEKAYGKDFAALKKVLPKFGTDY QSWYSESKALIKQLLPDRLADFARHYEKPKPRKDISYENYRIEDYLQGLRVTRGWEKEKVVGPDAAIPHLEQQLAIVKAV SSRFESSLFDIRQLVQADLFDSEIAAAQELLKSGFSRGAGAVAGVVLEKHLGQVAENHNITTRKKNPTISDFNDLLKGAE VLDTPAWRQIQRLGDIRNLCDHSKDREPTKDEVQELISGVEKFTKTLF
Sequences:
>Translated_288_residues MSLLLMRCQPLRRALAKCRNGDTMQANLEKFKKDLKALSRTGELLLLAMQYDCHPEAVEKAYGKDFAALKKVLPKFGTDY QSWYSESKALIKQLLPDRLADFARHYEKPKPRKDISYENYRIEDYLQGLRVTRGWEKEKVVGPDAAIPHLEQQLAIVKAV SSRFESSLFDIRQLVQADLFDSEIAAAQELLKSGFSRGAGAVAGVVLEKHLGQVAENHNITTRKKNPTISDFNDLLKGAE VLDTPAWRQIQRLGDIRNLCDHSKDREPTKDEVQELISGVEKFTKTLF >Mature_287_residues SLLLMRCQPLRRALAKCRNGDTMQANLEKFKKDLKALSRTGELLLLAMQYDCHPEAVEKAYGKDFAALKKVLPKFGTDYQ SWYSESKALIKQLLPDRLADFARHYEKPKPRKDISYENYRIEDYLQGLRVTRGWEKEKVVGPDAAIPHLEQQLAIVKAVS SRFESSLFDIRQLVQADLFDSEIAAAQELLKSGFSRGAGAVAGVVLEKHLGQVAENHNITTRKKNPTISDFNDLLKGAEV LDTPAWRQIQRLGDIRNLCDHSKDREPTKDEVQELISGVEKFTKTLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32734; Mature: 32603
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLLMRCQPLRRALAKCRNGDTMQANLEKFKKDLKALSRTGELLLLAMQYDCHPEAVEK CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHEEEHHHCCCCHHHHHH AYGKDFAALKKVLPKFGTDYQSWYSESKALIKQLLPDRLADFARHYEKPKPRKDISYENY HHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC RIEDYLQGLRVTRGWEKEKVVGPDAAIPHLEQQLAIVKAVSSRFESSLFDIRQLVQADLF CHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSEIAAAQELLKSGFSRGAGAVAGVVLEKHLGQVAENHNITTRKKNPTISDFNDLLKGAE HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH VLDTPAWRQIQRLGDIRNLCDHSKDREPTKDEVQELISGVEKFTKTLF HHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLLLMRCQPLRRALAKCRNGDTMQANLEKFKKDLKALSRTGELLLLAMQYDCHPEAVEK CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHEEEHHHCCCCHHHHHH AYGKDFAALKKVLPKFGTDYQSWYSESKALIKQLLPDRLADFARHYEKPKPRKDISYENY HHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC RIEDYLQGLRVTRGWEKEKVVGPDAAIPHLEQQLAIVKAVSSRFESSLFDIRQLVQADLF CHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSEIAAAQELLKSGFSRGAGAVAGVVLEKHLGQVAENHNITTRKKNPTISDFNDLLKGAE HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH VLDTPAWRQIQRLGDIRNLCDHSKDREPTKDEVQELISGVEKFTKTLF HHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA