| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920681
Identifier: 117920681
GI number: 117920681
Start: 2692598
End: 2692966
Strand: Direct
Name: 117920681
Synonym: Shewana3_2238
Alternate gene names: NA
Gene position: 2692598-2692966 (Clockwise)
Preceding gene: 117920680
Following gene: 117920682
Centisome position: 54.15
GC content: 37.67
Gene sequence:
>369_bases ATGTCTGAAATACCGGGAAAGAATATTTCCATAAATCAACTTGAGGAAATGTTTTCGAATATTCGTGAAAACACTGACTG GAACATTTCGGGTAACATGCTGTGGGGTTATTTCTTTACTCACAACGAACCTACGAAACTTGAAGAAGCCAAAGAAGCAT TGATTTCAAAAGGGTATACCTTTGTGGATATATATCTATCCGATAAAGAAGAACCGAATGAACCTGACATGTTTTGGTTG CATGTTGAGCGTATAGAGACTCACTCACCCAAGACTCTAGATGCAAGAAATGATGAACTGTATATTTTTGCTCATGAGTT TGGCCTTGATTCATATGATGGTATGGATATTGGCCCTGTAGCCAAATAA
Upstream 100 bases:
>100_bases ACGCGCATGCGCACGAATAAAATGTTAAAAGTCCATGAAACTCATAGCTACAGTACTATTATTTACGTTTTCAAGCTTTC TATATGCGGGAGAGAAAGGG
Downstream 100 bases:
>100_bases AACTTTTAACAAGGCCATTAAATTCGTTACGGCCGCAAAAAAACGCGGCCTCCACCGGACTGCCTACGCGTTGCTTCCGC ATCCGTTTATGGCGGCGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSEIPGKNISINQLEEMFSNIRENTDWNISGNMLWGYFFTHNEPTKLEEAKEALISKGYTFVDIYLSDKEEPNEPDMFWL HVERIETHSPKTLDARNDELYIFAHEFGLDSYDGMDIGPVAK
Sequences:
>Translated_122_residues MSEIPGKNISINQLEEMFSNIRENTDWNISGNMLWGYFFTHNEPTKLEEAKEALISKGYTFVDIYLSDKEEPNEPDMFWL HVERIETHSPKTLDARNDELYIFAHEFGLDSYDGMDIGPVAK >Mature_121_residues SEIPGKNISINQLEEMFSNIRENTDWNISGNMLWGYFFTHNEPTKLEEAKEALISKGYTFVDIYLSDKEEPNEPDMFWLH VERIETHSPKTLDARNDELYIFAHEFGLDSYDGMDIGPVAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14209; Mature: 14078
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIPGKNISINQLEEMFSNIRENTDWNISGNMLWGYFFTHNEPTKLEEAKEALISKGYT CCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCEEEEEEEECCCCCHHHHHHHHHHHCCCE FVDIYLSDKEEPNEPDMFWLHVERIETHSPKTLDARNDELYIFAHEFGLDSYDGMDIGPV EEEEEECCCCCCCCCCEEEEEEEEECCCCCCEECCCCCEEEEEEEECCCCCCCCCCCCCC AK CC >Mature Secondary Structure SEIPGKNISINQLEEMFSNIRENTDWNISGNMLWGYFFTHNEPTKLEEAKEALISKGYT CCCCCCCCCHHHHHHHHHHHHCCCCCCEECCEEEEEEEECCCCCHHHHHHHHHHHCCCE FVDIYLSDKEEPNEPDMFWLHVERIETHSPKTLDARNDELYIFAHEFGLDSYDGMDIGPV EEEEEECCCCCCCCCCEEEEEEEEECCCCCCEECCCCCEEEEEEEECCCCCCCCCCCCCC AK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA