Click here to switch to the map view.

The map label for this gene is yedZ [H]

Identifier: 117920676

GI number: 117920676

Start: 2685209

End: 2685856

Strand: Reverse

Name: yedZ [H]

Synonym: Shewana3_2233

Alternate gene names: 117920676

Gene position: 2685856-2685209 (Counterclockwise)

Preceding gene: 117920677

Following gene: 117920674

Centisome position: 54.02

GC content: 50.15

Gene sequence:

>648_bases
ATGTTCAATATCACGGCGGTAAGAGTCACGCCAAAACAGCTGCTCTGGGTAAAGTTAGTCTTTCATTTGATTGGGCTTAT
CCCGATTGCTTGGCTGATTTTTACTGTGCTGTCGGGCCGTGCGGGCGGCGACCCCGTGCAGCATATTATCCACTTTACTG
GCATTGGCGCTTTAAATGCGTTGGCGGCTACGCTGCTGATTTCCCCCCTTGCTAAGGGATTAAAGTTAGGCTGGTTAATG
CAGACACGCCGTTTAGTTGGCTTGTATGTGTTTGCCTATGCGACTTTGCATATAGTGGCGTTTTTTAGTTTAGATCTGCT
GTTTGCCTGGGAGTTATTCTTCAGTGAAGTGGCGAAACGGCCTTATATTTTAGTCGGCGCACTGGCCTATGCGATAGTCA
CCGCGCTAGCACTGACGTCCTTTAAAGCCTTGATGCGTACAATGGGCCGCCGTTGGCAAACGCTGCACAATGGGGTGTAT
GTGGTGGCGATACTGGCGCCGATTCATTTTTATTGGTCGGTAAAATCCGAAATTATTGAACCGAGTCTGTATATCCTTGG
CTTTAGTTTGTTGCTCGCGTGGCGTTTGCCCATTTGGCAGAAGAAGCGCAGCAGCCGTATCGCCATGGCCGCCGAGGGCA
AGCGGTAA

Upstream 100 bases:

>100_bases
GCTGTTGTTTAGGCGCCATTGATTGCGCCTAGCGAACGAGCTGCAATATCTAGCGGCATACTGGTTAGTGCCTTGAAAGA
GTCAAAAGAGTAGGAGTCCT

Downstream 100 bases:

>100_bases
TCCCTAGTATTGGCATTTATTTATGAGCAAAGAAAACGGCGTTTGCAGGGTATGCAAACGCCGTTTTATATCAGGCGGGA
AGGTAATAGGCTTAACCTAA

Product: putative sulfite oxidase subunit YedZ

Products: NA

Alternate protein names: Flavocytochrome yedZ [H]

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MFNITAVRVTPKQLLWVKLVFHLIGLIPIAWLIFTVLSGRAGGDPVQHIIHFTGIGALNALAATLLISPLAKGLKLGWLM
QTRRLVGLYVFAYATLHIVAFFSLDLLFAWELFFSEVAKRPYILVGALAYAIVTALALTSFKALMRTMGRRWQTLHNGVY
VVAILAPIHFYWSVKSEIIEPSLYILGFSLLLAWRLPIWQKKRSSRIAMAAEGKR

Sequences:

>Translated_215_residues
MFNITAVRVTPKQLLWVKLVFHLIGLIPIAWLIFTVLSGRAGGDPVQHIIHFTGIGALNALAATLLISPLAKGLKLGWLM
QTRRLVGLYVFAYATLHIVAFFSLDLLFAWELFFSEVAKRPYILVGALAYAIVTALALTSFKALMRTMGRRWQTLHNGVY
VVAILAPIHFYWSVKSEIIEPSLYILGFSLLLAWRLPIWQKKRSSRIAMAAEGKR
>Mature_215_residues
MFNITAVRVTPKQLLWVKLVFHLIGLIPIAWLIFTVLSGRAGGDPVQHIIHFTGIGALNALAATLLISPLAKGLKLGWLM
QTRRLVGLYVFAYATLHIVAFFSLDLLFAWELFFSEVAKRPYILVGALAYAIVTALALTSFKALMRTMGRRWQTLHNGVY
VVAILAPIHFYWSVKSEIIEPSLYILGFSLLLAWRLPIWQKKRSSRIAMAAEGKR

Specific function: Is probably involved in the electron transfer between its heme and the molybdenum cofactor of the reductase catalytic subunit yedY [H]

COG id: COG2717

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedZ family [H]

Homologues:

Organism=Escherichia coli, GI1788283, Length=179, Percent_Identity=48.0446927374302, Blast_Score=162, Evalue=2e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013130
- InterPro:   IPR022837 [H]

Pfam domain/function: PF01794 Ferric_reduct [H]

EC number: NA

Molecular weight: Translated: 24176; Mature: 24176

Theoretical pI: Translated: 11.17; Mature: 11.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNITAVRVTPKQLLWVKLVFHLIGLIPIAWLIFTVLSGRAGGDPVQHIIHFTGIGALNA
CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHH
LAATLLISPLAKGLKLGWLMQTRRLVGLYVFAYATLHIVAFFSLDLLFAWELFFSEVAKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PYILVGALAYAIVTALALTSFKALMRTMGRRWQTLHNGVYVVAILAPIHFYWSVKSEIIE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
PSLYILGFSLLLAWRLPIWQKKRSSRIAMAAEGKR
CHHHHHHHHHHHHHHCCHHHHHHCCCEEECCCCCC
>Mature Secondary Structure
MFNITAVRVTPKQLLWVKLVFHLIGLIPIAWLIFTVLSGRAGGDPVQHIIHFTGIGALNA
CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHH
LAATLLISPLAKGLKLGWLMQTRRLVGLYVFAYATLHIVAFFSLDLLFAWELFFSEVAKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PYILVGALAYAIVTALALTSFKALMRTMGRRWQTLHNGVYVVAILAPIHFYWSVKSEIIE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
PSLYILGFSLLLAWRLPIWQKKRSSRIAMAAEGKR
CHHHHHHHHHHHHHHCCHHHHHHCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA