| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is marR [C]
Identifier: 117920673
GI number: 117920673
Start: 2682292
End: 2682753
Strand: Reverse
Name: marR [C]
Synonym: Shewana3_2230
Alternate gene names: 117920673
Gene position: 2682753-2682292 (Counterclockwise)
Preceding gene: 117920674
Following gene: 117920672
Centisome position: 53.96
GC content: 50.65
Gene sequence:
>462_bases ATGACAGTTGCACACCCGCATGATGCTTTATCAGCCGCGTCCGCCCATTCTACGGATCAGGCCCTGAACCATGTGATTAT TGAGTTTTATGAAAAATTATCATCGTGGGAGCATGCTATTGTGCGCGATAAGGGTTTTAGCTTATCGCAGGTACACACAA TAGAGTTGTTGGGTGTGCACGGCGCGATGCGAATGAAGGAACTGGCCGACAAAATCGGCGTGACCACAGGCACGCTCACG GTACAAATCGATAAAATGGTCGAATCCCAGTGGGTGATGCGTCGTCCCCATGAGAGTGACAGACGCTCGATTCTGGTCGA GCTCACCGAGAAAGGTCAGGCGCTGTTCCTTGAGCATGATGCGCTGCATTTGCAATTAACGACCGATCTCACCGCTAAGA TGAGTGCAGAGGAGCGAAGCTTACTGCTGAGTTTGCTGACGCGGATGAACCAAGAGTTTTAA
Upstream 100 bases:
>100_bases GTTATTTTAATCAGTTACTGACTAAGTTCCCTGAGTTATCTCATATTACCATTGAGCTGCATACTTGCCGTCAACGTGAG TGTGTGGCTAAGGAAGCCTA
Downstream 100 bases:
>100_bases TGGCAGAGTTAACTCGCTATTGAGTATTCACTAAAGCGCCCCATTGGGCGCTTTTTTATGGCATAACATCTCGAATATTT TCGATTCATTCTCGATTAAT
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator MarR Family; MarR-Family Transcriptional Regulator; Regulatory Protein MarR; Transcriptional Regulator MarR Family Protein
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MTVAHPHDALSAASAHSTDQALNHVIIEFYEKLSSWEHAIVRDKGFSLSQVHTIELLGVHGAMRMKELADKIGVTTGTLT VQIDKMVESQWVMRRPHESDRRSILVELTEKGQALFLEHDALHLQLTTDLTAKMSAEERSLLLSLLTRMNQEF
Sequences:
>Translated_153_residues MTVAHPHDALSAASAHSTDQALNHVIIEFYEKLSSWEHAIVRDKGFSLSQVHTIELLGVHGAMRMKELADKIGVTTGTLT VQIDKMVESQWVMRRPHESDRRSILVELTEKGQALFLEHDALHLQLTTDLTAKMSAEERSLLLSLLTRMNQEF >Mature_152_residues TVAHPHDALSAASAHSTDQALNHVIIEFYEKLSSWEHAIVRDKGFSLSQVHTIELLGVHGAMRMKELADKIGVTTGTLTV QIDKMVESQWVMRRPHESDRRSILVELTEKGQALFLEHDALHLQLTTDLTAKMSAEERSLLLSLLTRMNQEF
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17269; Mature: 17138
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVAHPHDALSAASAHSTDQALNHVIIEFYEKLSSWEHAIVRDKGFSLSQVHTIELLGVH CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEEECH GAMRMKELADKIGVTTGTLTVQIDKMVESQWVMRRPHESDRRSILVELTEKGQALFLEHD HHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCCCCCCHHEEEEEEECCCCEEEEECC ALHLQLTTDLTAKMSAEERSLLLSLLTRMNQEF EEEEEEECCCHHHHCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TVAHPHDALSAASAHSTDQALNHVIIEFYEKLSSWEHAIVRDKGFSLSQVHTIELLGVH CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEEECH GAMRMKELADKIGVTTGTLTVQIDKMVESQWVMRRPHESDRRSILVELTEKGQALFLEHD HHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCCCCCCHHEEEEEEECCCCEEEEECC ALHLQLTTDLTAKMSAEERSLLLSLLTRMNQEF EEEEEEECCCHHHHCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA