| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920664
Identifier: 117920664
GI number: 117920664
Start: 2668961
End: 2669254
Strand: Reverse
Name: 117920664
Synonym: Shewana3_2221
Alternate gene names: NA
Gene position: 2669254-2668961 (Counterclockwise)
Preceding gene: 117920665
Following gene: 117920663
Centisome position: 53.68
GC content: 42.52
Gene sequence:
>294_bases ATGGCTAATATTTTCTACATCTCTTTGCCGGAACGTTTTGATTTTTATCACCATAAAAAATTCACCAACGATTATCAAAA GGCCTTTCTCGAAGAGGACATTAAGCACTTAGTGCTGGATTTTAGCCGCGTGCTTTACATTGATAGCTCGGCCCTTGGAA TGATGGTGTTGCTGCATCGAAAAGCGTTGGAGCGACAGATCAGCACGGCGATTCGAGGTTTGCACGGTCAAGCGGAAGAA ATTATCAACATAGCTAATATGGGTCGTTTGTATCTTGTCGAACGGGATGTATAA
Upstream 100 bases:
>100_bases TATCCCAGATCAGTGGTCGGCGTAAAAATACCCATAACCCAGTATCAGCAAGTCAAATCAGTTGCGGTGAAATTGAGCTT TTCTAAATAGGGACATTGTG
Downstream 100 bases:
>100_bases GTGCCTAAAAGCCAACGCTATATTTTGGTCATTGAAGATGACCTAGTGACAAACCAAATTATTACCGCGTTTATTCACAG TAAAGGTTGGGGGGTGATCA
Product: anti-sigma-factor antagonist
Products: NA
Alternate protein names: Anti-Sigma-Factor Antagonist; Sulfate Transporter/Antisigma-Factor Antagonist STAS
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MANIFYISLPERFDFYHHKKFTNDYQKAFLEEDIKHLVLDFSRVLYIDSSALGMMVLLHRKALERQISTAIRGLHGQAEE IINIANMGRLYLVERDV
Sequences:
>Translated_97_residues MANIFYISLPERFDFYHHKKFTNDYQKAFLEEDIKHLVLDFSRVLYIDSSALGMMVLLHRKALERQISTAIRGLHGQAEE IINIANMGRLYLVERDV >Mature_96_residues ANIFYISLPERFDFYHHKKFTNDYQKAFLEEDIKHLVLDFSRVLYIDSSALGMMVLLHRKALERQISTAIRGLHGQAEEI INIANMGRLYLVERDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11429; Mature: 11298
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANIFYISLPERFDFYHHKKFTNDYQKAFLEEDIKHLVLDFSRVLYIDSSALGMMVLLHR CCEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHH KALERQISTAIRGLHGQAEEIINIANMGRLYLVERDV HHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEECC >Mature Secondary Structure ANIFYISLPERFDFYHHKKFTNDYQKAFLEEDIKHLVLDFSRVLYIDSSALGMMVLLHR CEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHH KALERQISTAIRGLHGQAEEIINIANMGRLYLVERDV HHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA