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The map label for this gene is mcp4 [H]

Identifier: 117920665

GI number: 117920665

Start: 2669269

End: 2670405

Strand: Reverse

Name: mcp4 [H]

Synonym: Shewana3_2222

Alternate gene names: 117920665

Gene position: 2670405-2669269 (Counterclockwise)

Preceding gene: 117920667

Following gene: 117920664

Centisome position: 53.71

GC content: 46.17

Gene sequence:

>1137_bases
ATGACATACAAGGATGGCATTGTTGCAGTGTTTGCAGCAGTAATAGGATATTTTATCGGCAGCTTAGTCAGTTTTACGCT
GAGTACCTTAGTTGCCGTGATTATCATGCTCGGTTGGCAATTCTATCGACAATCCTCAGCCTCTCAACCCATACCTCACT
CCTTTGCCACTTCCGCAGCGAGCGGCGACTGGCAAGATCAGCTTAATCTCTATCAAGAAGTGTCAGTGTCATTAAAGACC
TGCGAGCAGAGTATCGACGATGTGCTGTCGGTACAGTCGGATGCGGTTGATTTACTCGGTGGCGCCTTCGATGGCTTAGG
TAAATTAATGCACGAGCAAAGCGAGTTTATCTCAGCATTGGTTCATAGCGCCGATGATGAAGAAATCTTTCACTCAGAGC
AGATGAAGCTATTTGCCAATAACACTTCGATGACGCTAGAGCGTTTTATTCAATCGACCATTGAGATGTCTGCATCCAAT
ATCGATCTGCTCGAAAAGGTCAATGTGATTTATGAATCTATGCCTCAGGCGATGAAGGCACTCAAGGATATAGACCAAAT
CTCTTCGCAAACTAATCTATTAGCCTTAAATGCGGCCATTGAAGCCGCCCGCGCGGGCGATGCGGGCAGGGGCTTTGCCG
TGGTGGCCGATGAAGTGCGCGCCTTATCTAATCGCAGTGCAGGCTTTAGCGAAAGTATTCAAAAACAGTTACATACCATT
CAAGTGCAAATCGAGCAGCTCACCCATCAAGTGAGTAAAGTGGCTGCTCAGGATATGTCTTACATTATTGAGGCGAAAAA
AGATCTCGATACCGCGCTGGAGCAAATCATTGTTAAAGCAGAAAAAGATGCCGCAGTGATTGACAGAATTGATGCCTCTG
CCCATGAATTGGAAAGCGCCATTGCAGACGCTATTCGTGGCTTACAATTTAGCGATATCACCTCCCAAAGTATGATTTAC
ACCAATCAGACGCTGCAACATTTGCGGGAGTCCTTAAATAGTGTCACCGCGATGTCGCCTGAAGAATTCGACGAACAGTG
TGATGGTCTGGTATCCCAGATCAGTGGTCGGCGTAAAAATACCCATAACCCAGTATCAGCAAGTCAAATCAGTTGCGGTG
AAATTGAGCTTTTCTAA

Upstream 100 bases:

>100_bases
CACGCCGTGCTGATTTGAGCGAAAAAAATCAGTTAGTCGTTTGAAAACCCCTGAATATGAAACTACTTTTTAATCACAGA
TCAATAATTGCGAAGTCTCT

Downstream 100 bases:

>100_bases
ATAGGGACATTGTGATGGCTAATATTTTCTACATCTCTTTGCCGGAACGTTTTGATTTTTATCACCATAAAAAATTCACC
AACGATTATCAAAAGGCCTT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MTYKDGIVAVFAAVIGYFIGSLVSFTLSTLVAVIIMLGWQFYRQSSASQPIPHSFATSAASGDWQDQLNLYQEVSVSLKT
CEQSIDDVLSVQSDAVDLLGGAFDGLGKLMHEQSEFISALVHSADDEEIFHSEQMKLFANNTSMTLERFIQSTIEMSASN
IDLLEKVNVIYESMPQAMKALKDIDQISSQTNLLALNAAIEAARAGDAGRGFAVVADEVRALSNRSAGFSESIQKQLHTI
QVQIEQLTHQVSKVAAQDMSYIIEAKKDLDTALEQIIVKAEKDAAVIDRIDASAHELESAIADAIRGLQFSDITSQSMIY
TNQTLQHLRESLNSVTAMSPEEFDEQCDGLVSQISGRRKNTHNPVSASQISCGEIELF

Sequences:

>Translated_378_residues
MTYKDGIVAVFAAVIGYFIGSLVSFTLSTLVAVIIMLGWQFYRQSSASQPIPHSFATSAASGDWQDQLNLYQEVSVSLKT
CEQSIDDVLSVQSDAVDLLGGAFDGLGKLMHEQSEFISALVHSADDEEIFHSEQMKLFANNTSMTLERFIQSTIEMSASN
IDLLEKVNVIYESMPQAMKALKDIDQISSQTNLLALNAAIEAARAGDAGRGFAVVADEVRALSNRSAGFSESIQKQLHTI
QVQIEQLTHQVSKVAAQDMSYIIEAKKDLDTALEQIIVKAEKDAAVIDRIDASAHELESAIADAIRGLQFSDITSQSMIY
TNQTLQHLRESLNSVTAMSPEEFDEQCDGLVSQISGRRKNTHNPVSASQISCGEIELF
>Mature_377_residues
TYKDGIVAVFAAVIGYFIGSLVSFTLSTLVAVIIMLGWQFYRQSSASQPIPHSFATSAASGDWQDQLNLYQEVSVSLKTC
EQSIDDVLSVQSDAVDLLGGAFDGLGKLMHEQSEFISALVHSADDEEIFHSEQMKLFANNTSMTLERFIQSTIEMSASNI
DLLEKVNVIYESMPQAMKALKDIDQISSQTNLLALNAAIEAARAGDAGRGFAVVADEVRALSNRSAGFSESIQKQLHTIQ
VQIEQLTHQVSKVAAQDMSYIIEAKKDLDTALEQIIVKAEKDAAVIDRIDASAHELESAIADAIRGLQFSDITSQSMIYT
NQTLQHLRESLNSVTAMSPEEFDEQCDGLVSQISGRRKNTHNPVSASQISCGEIELF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1789453, Length=285, Percent_Identity=27.3684210526316, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1787690, Length=115, Percent_Identity=38.2608695652174, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788194, Length=73, Percent_Identity=52.0547945205479, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1788195, Length=51, Percent_Identity=66.6666666666667, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI2367378, Length=51, Percent_Identity=66.6666666666667, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 41313; Mature: 41182

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCCEECC
>Mature Secondary Structure 
TYKDGIVAVFAAVIGYFIGSLVSFTLSTLVAVIIMLGWQFYRQSSASQPIPHSFATSAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCC
SGDWQDQLNLYQEVSVSLKTCEQSIDDVLSVQSDAVDLLGGAFDGLGKLMHEQSEFISAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHSADDEEIFHSEQMKLFANNTSMTLERFIQSTIEMSASNIDLLEKVNVIYESMPQAMKA
HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LKDIDQISSQTNLLALNAAIEAARAGDAGRGFAVVADEVRALSNRSAGFSESIQKQLHTI
HHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
QVQIEQLTHQVSKVAAQDMSYIIEAKKDLDTALEQIIVKAEKDAAVIDRIDASAHELESA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHH
IADAIRGLQFSDITSQSMIYTNQTLQHLRESLNSVTAMSPEEFDEQCDGLVSQISGRRKN
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
THNPVSASQISCGEIELF
CCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]