| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920653
Identifier: 117920653
GI number: 117920653
Start: 2656020
End: 2656469
Strand: Reverse
Name: 117920653
Synonym: Shewana3_2210
Alternate gene names: NA
Gene position: 2656469-2656020 (Counterclockwise)
Preceding gene: 117920654
Following gene: 117920649
Centisome position: 53.43
GC content: 48.22
Gene sequence:
>450_bases ATGTCGGATAACACAGGTACAGTGAAGTTACATAGAGTGCTGCGTGCGCCCGCGGCGTTAGTCTACAAAGCCTTTACCGA TAAAGCGGCGTTAGAGCGTTGGTTACCACCTTACGGCTTTGTGGGGACGATTCATGAGTTTGAATTGGCCGTTGGGGCGG GCTATAGCATGAGCTTTACCCAATTCGCGACGGGATACAGTCACTCCTTTAAGGTGGTCTATACCGAGCTTATTCCCAAC CAACTGATTAGACATACTGACCAGTTTGATAATGAGAATCTGCCTGGTGTGATGCAGGTGACTATCGAATTAACTGAGGT TTCCTGCGGTACCAATTTGCAGATCATTCAGGAGGGGATTCCAGCCGTTATCCCTGAGGAGATGTGTTATTTAGGCTGGC AGGAGTCATTACAACAATTAGCGGCTTTGGTGGAAGCGAAAACCGAGTAA
Upstream 100 bases:
>100_bases GAGGGGATACTTAATATTCTCGCGCAGGTGATAACGAATGGGATTCTTGCGCTATCTTTAAGAACATCATTGGCCCATAA GCAATTGGAAGGATAAGGAT
Downstream 100 bases:
>100_bases CGCAGTCAGTCACTGCGTATATGAAAGGCTGATACAAAAGGGGAGTATAAAAAAGACGCTAAGCTCGAGTAGAGTGAAGC GTCTTTTCTTTGGGTCTTTT
Product: activator of Hsp90 ATPase family protein
Products: NA
Alternate protein names: Aha1 Domain Family Protein; Aha1 Domain-Containing Protein; Hsp90 ATPase Activator Family Protein
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSDNTGTVKLHRVLRAPAALVYKAFTDKAALERWLPPYGFVGTIHEFELAVGAGYSMSFTQFATGYSHSFKVVYTELIPN QLIRHTDQFDNENLPGVMQVTIELTEVSCGTNLQIIQEGIPAVIPEEMCYLGWQESLQQLAALVEAKTE
Sequences:
>Translated_149_residues MSDNTGTVKLHRVLRAPAALVYKAFTDKAALERWLPPYGFVGTIHEFELAVGAGYSMSFTQFATGYSHSFKVVYTELIPN QLIRHTDQFDNENLPGVMQVTIELTEVSCGTNLQIIQEGIPAVIPEEMCYLGWQESLQQLAALVEAKTE >Mature_148_residues SDNTGTVKLHRVLRAPAALVYKAFTDKAALERWLPPYGFVGTIHEFELAVGAGYSMSFTQFATGYSHSFKVVYTELIPNQ LIRHTDQFDNENLPGVMQVTIELTEVSCGTNLQIIQEGIPAVIPEEMCYLGWQESLQQLAALVEAKTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16597; Mature: 16466
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNTGTVKLHRVLRAPAALVYKAFTDKAALERWLPPYGFVGTIHEFELAVGAGYSMSFT CCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHH QFATGYSHSFKVVYTELIPNQLIRHTDQFDNENLPGVMQVTIELTEVSCGTNLQIIQEGI HHHCCCCCCHHEEHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCHHHHHCCC PAVIPEEMCYLGWQESLQQLAALVEAKTE CCCCCHHHHHCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDNTGTVKLHRVLRAPAALVYKAFTDKAALERWLPPYGFVGTIHEFELAVGAGYSMSFT CCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHH QFATGYSHSFKVVYTELIPNQLIRHTDQFDNENLPGVMQVTIELTEVSCGTNLQIIQEGI HHHCCCCCCHHEEHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCHHHHHCCC PAVIPEEMCYLGWQESLQQLAALVEAKTE CCCCCHHHHHCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA