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The map label for this gene is yaiC [C]

Identifier: 117920649

GI number: 117920649

Start: 2647620

End: 2648585

Strand: Reverse

Name: yaiC [C]

Synonym: Shewana3_2206

Alternate gene names: 117920649

Gene position: 2648585-2647620 (Counterclockwise)

Preceding gene: 117920653

Following gene: 117920648

Centisome position: 53.27

GC content: 48.03

Gene sequence:

>966_bases
TTGGGAACTCCTGCAAAATCATTACGGCTCGCCAGCGTCTATGGCTTAAGTCTGCTTATTATCTTTATCGTGCCGCTGTT
TCTTTGGCAAAGCACCACGGCCAAGACTGTGGCGGCGGTGGATTGGTTTGATGTCGTCACCGAGGGCGCCTTATTTATCC
TCGGTATGTGTTGGTTGATGGTGATAGTGTCTGTTCGCCCCTCTGGCCGGGTGACAAATCTATTGATCGCTGGCCTCTCA
AGTTACTGCTTGGGCTGCTATTTAGATTTGCTGGATGAGATTTTTATCGTCAAAACTATCCCAGTGTATAACTGGTTTGA
AAAGATGCCGACGCCAGTTGGATTGCTGGTGCTGACCTGTGGTCTATGGCTATGGCGTGATGAGCAAACCGTCGTCAATC
GCCAGTTGCAAACCCGGGAGCAATTTCACCGCGAACACCAGTTAACCGATGGCTTAACCTTGCTCAATGATGCTAAAGCC
TTTGAACATCACTTAATAAAACAATTATCGCAAAATCAATCATCTGGTCTGATTATGCTTGATATCGATAATTTTCATCA
ATATAACCAAAATCAAGGAGTGGAAGAGGGTGATAGGCTCTTGTCGCAGTTGGCATTGTGGTTAAGCTCAACCCTTAGGA
ATCAGGATTTAGTCTGCCGCTACGCTGGTGATCGCTTTATCATTCTGTTGCGCGGTGCGATTCCTGCCCTAGTGAGTGTG
ATGGCGGAGCAGATACAACAAGGTGTTAGCGCGTTCGGTTGTAGCGCCTCCGTGGTCTGGGCGCTGCCATCACCTAAAGT
GTTGCCGTTGCAAACGCATAAAACGCCTGCCAAGGAAGAGGCCGCTACGCTGCTGCAATTATTGAATCAAAAAATGTCAC
AGCAAAAAGAGAGTCGTAGTCCTGCAGCCACACCGGCTCAAGCGAGTAACACGTTCAATCAGTCTACCTTGAGTGAGCTT
AACTGA

Upstream 100 bases:

>100_bases
GGCGTCACGGCGTTGTCATAAAAGCCCGCTAACTTGCCATCCCATAAAGCATTAACGTTGTATTTGCCCCATTTGGGCTT
CACAGAACAAGGTGTGTACT

Downstream 100 bases:

>100_bases
TGCGCGCGCTCGCCACTTGGCAGGATAAATGTATCGATAGCCAATTGCTGGTGGCGAGCATCGTTGGGCTTTTTAAACAG
CGTGGGCTCGATAGTGATAA

Product: diguanylate cyclase

Products: NA

Alternate protein names: GGDEF Domain-Containing Protein; GGDEF Domain Protein; Ggdef Domain Protein; Response Regulator PleD; Sensor Histidine Kinase; K+ Transporter Trk; Response Regulator Receiver Domain Protein; PAS/PAC And GAF Sensors-Containing Diguanylate Cyclase; Diguanylate Cyclase/Phosphodiesterase; Response Regulator Receiver Modulated Diguanylate Cyclase; Periplasmic/7TM Domain Sensor Diguanylate Cyclase; GGDEF/HD Domain Protein; 7TM Domain Sensor Diguanylate Cyclase; PAS-Family GGDEF/EAL Protein; Signal Protein; Metal Dependent Phosphohydrolase; Sensory Box Protein; Conserved Protein; Two-Component Response Regulator Protein; Diguanylate Cyclase With PAS/PAC And GAF Sensors; PleD-Like-Protein

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MGTPAKSLRLASVYGLSLLIIFIVPLFLWQSTTAKTVAAVDWFDVVTEGALFILGMCWLMVIVSVRPSGRVTNLLIAGLS
SYCLGCYLDLLDEIFIVKTIPVYNWFEKMPTPVGLLVLTCGLWLWRDEQTVVNRQLQTREQFHREHQLTDGLTLLNDAKA
FEHHLIKQLSQNQSSGLIMLDIDNFHQYNQNQGVEEGDRLLSQLALWLSSTLRNQDLVCRYAGDRFIILLRGAIPALVSV
MAEQIQQGVSAFGCSASVVWALPSPKVLPLQTHKTPAKEEAATLLQLLNQKMSQQKESRSPAATPAQASNTFNQSTLSEL
N

Sequences:

>Translated_321_residues
MGTPAKSLRLASVYGLSLLIIFIVPLFLWQSTTAKTVAAVDWFDVVTEGALFILGMCWLMVIVSVRPSGRVTNLLIAGLS
SYCLGCYLDLLDEIFIVKTIPVYNWFEKMPTPVGLLVLTCGLWLWRDEQTVVNRQLQTREQFHREHQLTDGLTLLNDAKA
FEHHLIKQLSQNQSSGLIMLDIDNFHQYNQNQGVEEGDRLLSQLALWLSSTLRNQDLVCRYAGDRFIILLRGAIPALVSV
MAEQIQQGVSAFGCSASVVWALPSPKVLPLQTHKTPAKEEAATLLQLLNQKMSQQKESRSPAATPAQASNTFNQSTLSEL
N
>Mature_320_residues
GTPAKSLRLASVYGLSLLIIFIVPLFLWQSTTAKTVAAVDWFDVVTEGALFILGMCWLMVIVSVRPSGRVTNLLIAGLSS
YCLGCYLDLLDEIFIVKTIPVYNWFEKMPTPVGLLVLTCGLWLWRDEQTVVNRQLQTREQFHREHQLTDGLTLLNDAKAF
EHHLIKQLSQNQSSGLIMLDIDNFHQYNQNQGVEEGDRLLSQLALWLSSTLRNQDLVCRYAGDRFIILLRGAIPALVSVM
AEQIQQGVSAFGCSASVVWALPSPKVLPLQTHKTPAKEEAATLLQLLNQKMSQQKESRSPAATPAQASNTFNQSTLSELN

Specific function: Unknown

COG id: COG3706

COG function: function code T; Response regulator containing a CheY-like receiver domain and a GGDEF domain

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35786; Mature: 35655

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTPAKSLRLASVYGLSLLIIFIVPLFLWQSTTAKTVAAVDWFDVVTEGALFILGMCWLM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIVSVRPSGRVTNLLIAGLSSYCLGCYLDLLDEIFIVKTIPVYNWFEKMPTPVGLLVLTC
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHH
GLWLWRDEQTVVNRQLQTREQFHREHQLTDGLTLLNDAKAFEHHLIKQLSQNQSSGLIML
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
DIDNFHQYNQNQGVEEGDRLLSQLALWLSSTLRNQDLVCRYAGDRFIILLRGAIPALVSV
EEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEHHHHHHHHHH
MAEQIQQGVSAFGCSASVVWALPSPKVLPLQTHKTPAKEEAATLLQLLNQKMSQQKESRS
HHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PAATPAQASNTFNQSTLSELN
CCCCCCHHCCCCCHHHHHHCC
>Mature Secondary Structure 
GTPAKSLRLASVYGLSLLIIFIVPLFLWQSTTAKTVAAVDWFDVVTEGALFILGMCWLM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIVSVRPSGRVTNLLIAGLSSYCLGCYLDLLDEIFIVKTIPVYNWFEKMPTPVGLLVLTC
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHH
GLWLWRDEQTVVNRQLQTREQFHREHQLTDGLTLLNDAKAFEHHLIKQLSQNQSSGLIML
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
DIDNFHQYNQNQGVEEGDRLLSQLALWLSSTLRNQDLVCRYAGDRFIILLRGAIPALVSV
EEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEHHHHHHHHHH
MAEQIQQGVSAFGCSASVVWALPSPKVLPLQTHKTPAKEEAATLLQLLNQKMSQQKESRS
HHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PAATPAQASNTFNQSTLSELN
CCCCCCHHCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA