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The map label for this gene is 117920619

Identifier: 117920619

GI number: 117920619

Start: 2607529

End: 2608851

Strand: Direct

Name: 117920619

Synonym: Shewana3_2175

Alternate gene names: NA

Gene position: 2607529-2608851 (Clockwise)

Preceding gene: 117920618

Following gene: 117920620

Centisome position: 52.44

GC content: 41.87

Gene sequence:

>1323_bases
ATGAATAATTTGAGGGATAATGTTCAGGTTAGGATATATAAGGATATAAAAGGCGCTTCGTTTCCAGTCGTAGTTAGGAA
CGGCTTCCTCCCATGCTGCTTGTACCTGAATGCTTACCTAAACGGCAATCATAACTCCCCACTTTCCAATGCGAGATCAC
ACACCTCAAAACAGTCAGCGTCATTCTACACTCGAATGAAATATGCCTATGAGTTGAAGTTTTTATATTGCTTCTTCATG
GAGAACGGTATTGACCTTGTTGAGCGTGTAGCATGTGGATCGTTTTTATCGATCGAGGAAATTGATGACTACATTCGTGC
ATGTAAATTCTATGTGGACACAAAAGACGATAACAAAGACAGCACGGTAGTCAGCCTGACTGATAAAAGGATCAGAGATG
CGATACATGCGACATCCATCAGTCAACCAGAAGTGTCAGTGCATACGTTTAATCAACGCCTCAATCGACTGAAAGCCTAC
ATTGAATTCCTATATGTGTGCCATCACTACGATAGAGCTGAAACTGATCAGCAAATCAGTACGGATGCTCAATTTAATAA
ATTTAAACTCTACATAAGCTCGGTGATATCTCACTCTAGAAAAGACAACACGGTTGTTAAAGATCCCTTTGAATCCGTGA
TTTCAGCGAATAAGTTCTTTGATTTATTAGAAATTATTAAAGAGCGCTCGCCAAATAACCCATTCAAGTCGAGCAAGCTT
CGAAATCAAATCATCGCCCAAATATTGATTGATACTGGCGTTCGTGTGGGTGCTGTATTGAAATTGAAGGTGAGTGATTT
AGTGGATGATTGGGGCAACCCTCGATTCCGACTAACCCGAACACCTAACGACCCTACGGACATAAGGCGGCTTCCCGCCG
CGAATAAAACAAAAGCACTCTCAGTTTCCATCTCTCGTGACTTGATGAAACTCATTAAGCTCTACATTGAAACCGTGCGC
CAAAGTACCCCAAACGCTCATAAGCATGACTTTGTCTTCATTTCGGAGAAAGGAAAATCCATAGGAAAGCCAATCTCTTA
CAACGCCATTCACAAAGTCATAAAGACCTTTGGGGACGCGATTGGAATAGCACTGCACCCCCATTTACTTCGTCATAAAT
GGAATGAAATCTTTGAAGATAAAGCAAAAGAGAAAGGATTTTCACCAGATAAAATTGAAGACCTTCGCAAATATGCGATG
GGTTGGGTGGAAAATTCAAAAATGGCCTCCGTCTACAACGAATTCCAATTAGCCGTAACGGTGGCGGAAATCTCATCGAA
AAACCAGAGCCAATCCGTGCCTAACCTGAGAGGTGACCAATGA

Upstream 100 bases:

>100_bases
GTTTGTATAACAGTTTCCTTAGTAAATCTGTTTTTTATCTTTACAAAAAGCTAAAGACCTACCATAGTGTATTTATGTGT
AAGCGATATTGAATTATGTA

Downstream 100 bases:

>100_bases
ACATCCTTGAATTAAATGATTTAATTAATCGTTTTGAAGGAACAAGTACCTTTCAGTCAAAAATGGAGGGCTATGATTTC
GAGCTCTTTTCAGATGAGTG

Product: phage integrase family protein

Products: NA

Alternate protein names: Phage Integrase; Phage Integrase Family Protein; Integrase; Integrase/Recombinase; Site-Specific Recombinase Phage Integrase Family; Site Specific Recombinase; Tyrosine Recombinase XerD; Transposition Regulatory Protein TnpA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MNNLRDNVQVRIYKDIKGASFPVVVRNGFLPCCLYLNAYLNGNHNSPLSNARSHTSKQSASFYTRMKYAYELKFLYCFFM
ENGIDLVERVACGSFLSIEEIDDYIRACKFYVDTKDDNKDSTVVSLTDKRIRDAIHATSISQPEVSVHTFNQRLNRLKAY
IEFLYVCHHYDRAETDQQISTDAQFNKFKLYISSVISHSRKDNTVVKDPFESVISANKFFDLLEIIKERSPNNPFKSSKL
RNQIIAQILIDTGVRVGAVLKLKVSDLVDDWGNPRFRLTRTPNDPTDIRRLPAANKTKALSVSISRDLMKLIKLYIETVR
QSTPNAHKHDFVFISEKGKSIGKPISYNAIHKVIKTFGDAIGIALHPHLLRHKWNEIFEDKAKEKGFSPDKIEDLRKYAM
GWVENSKMASVYNEFQLAVTVAEISSKNQSQSVPNLRGDQ

Sequences:

>Translated_440_residues
MNNLRDNVQVRIYKDIKGASFPVVVRNGFLPCCLYLNAYLNGNHNSPLSNARSHTSKQSASFYTRMKYAYELKFLYCFFM
ENGIDLVERVACGSFLSIEEIDDYIRACKFYVDTKDDNKDSTVVSLTDKRIRDAIHATSISQPEVSVHTFNQRLNRLKAY
IEFLYVCHHYDRAETDQQISTDAQFNKFKLYISSVISHSRKDNTVVKDPFESVISANKFFDLLEIIKERSPNNPFKSSKL
RNQIIAQILIDTGVRVGAVLKLKVSDLVDDWGNPRFRLTRTPNDPTDIRRLPAANKTKALSVSISRDLMKLIKLYIETVR
QSTPNAHKHDFVFISEKGKSIGKPISYNAIHKVIKTFGDAIGIALHPHLLRHKWNEIFEDKAKEKGFSPDKIEDLRKYAM
GWVENSKMASVYNEFQLAVTVAEISSKNQSQSVPNLRGDQ
>Mature_440_residues
MNNLRDNVQVRIYKDIKGASFPVVVRNGFLPCCLYLNAYLNGNHNSPLSNARSHTSKQSASFYTRMKYAYELKFLYCFFM
ENGIDLVERVACGSFLSIEEIDDYIRACKFYVDTKDDNKDSTVVSLTDKRIRDAIHATSISQPEVSVHTFNQRLNRLKAY
IEFLYVCHHYDRAETDQQISTDAQFNKFKLYISSVISHSRKDNTVVKDPFESVISANKFFDLLEIIKERSPNNPFKSSKL
RNQIIAQILIDTGVRVGAVLKLKVSDLVDDWGNPRFRLTRTPNDPTDIRRLPAANKTKALSVSISRDLMKLIKLYIETVR
QSTPNAHKHDFVFISEKGKSIGKPISYNAIHKVIKTFGDAIGIALHPHLLRHKWNEIFEDKAKEKGFSPDKIEDLRKYAM
GWVENSKMASVYNEFQLAVTVAEISSKNQSQSVPNLRGDQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50408; Mature: 50408

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLRDNVQVRIYKDIKGASFPVVVRNGFLPCCLYLNAYLNGNHNSPLSNARSHTSKQSA
CCCCCCCCEEEEEECCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
SFYTRMKYAYELKFLYCFFMENGIDLVERVACGSFLSIEEIDDYIRACKFYVDTKDDNKD
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHEEECCCCCCCC
STVVSLTDKRIRDAIHATSISQPEVSVHTFNQRLNRLKAYIEFLYVCHHYDRAETDQQIS
CEEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC
TDAQFNKFKLYISSVISHSRKDNTVVKDPFESVISANKFFDLLEIIKERSPNNPFKSSKL
CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
RNQIIAQILIDTGVRVGAVLKLKVSDLVDDWGNPRFRLTRTPNDPTDIRRLPAANKTKAL
HHHHHHHHHHHCCCCCCEEEEEEHHHHHHHCCCCCEEEEECCCCHHHHHHCCCCCCCCEE
SVSISRDLMKLIKLYIETVRQSTPNAHKHDFVFISEKGKSIGKPISYNAIHKVIKTFGDA
EEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
IGIALHPHLLRHKWNEIFEDKAKEKGFSPDKIEDLRKYAMGWVENSKMASVYNEFQLAVT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEE
VAEISSKNQSQSVPNLRGDQ
HHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNNLRDNVQVRIYKDIKGASFPVVVRNGFLPCCLYLNAYLNGNHNSPLSNARSHTSKQSA
CCCCCCCCEEEEEECCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
SFYTRMKYAYELKFLYCFFMENGIDLVERVACGSFLSIEEIDDYIRACKFYVDTKDDNKD
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHEEECCCCCCCC
STVVSLTDKRIRDAIHATSISQPEVSVHTFNQRLNRLKAYIEFLYVCHHYDRAETDQQIS
CEEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC
TDAQFNKFKLYISSVISHSRKDNTVVKDPFESVISANKFFDLLEIIKERSPNNPFKSSKL
CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
RNQIIAQILIDTGVRVGAVLKLKVSDLVDDWGNPRFRLTRTPNDPTDIRRLPAANKTKAL
HHHHHHHHHHHCCCCCCEEEEEEHHHHHHHCCCCCEEEEECCCCHHHHHHCCCCCCCCEE
SVSISRDLMKLIKLYIETVRQSTPNAHKHDFVFISEKGKSIGKPISYNAIHKVIKTFGDA
EEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
IGIALHPHLLRHKWNEIFEDKAKEKGFSPDKIEDLRKYAMGWVENSKMASVYNEFQLAVT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEE
VAEISSKNQSQSVPNLRGDQ
HHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA