| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is bax [H]
Identifier: 117920563
GI number: 117920563
Start: 2542351
End: 2543163
Strand: Reverse
Name: bax [H]
Synonym: Shewana3_2119
Alternate gene names: 117920563
Gene position: 2543163-2542351 (Counterclockwise)
Preceding gene: 117920565
Following gene: 117920562
Centisome position: 51.15
GC content: 44.4
Gene sequence:
>813_bases TTGAAAACAGGTAGAATTGGTTCGTTTACACTCGCGTTAGCCCTAGTGATCTTAGCGATTTTTTCGCTGAGAGTCTGGCT CATTCCTACTATTGATGAGCCTGAATCTATCGTTAACCAACTGGAAAACTCCGTTGATCCCGTTACTCAAGTGCCTGACT TTTCTGCCATCAATGATGTGGCGGAAAAAAAGCGTGCCTTTTTTGATTTTCTCAGGCCGATCATTCAACAACAAAATGCC ATTATTGCCACCGAGCGTGACTTTATCACCGACATGTTGGCCTTAGTGGAGAACGACAGTACTCTGTCGGATAAGCAGTT AGCGCAGCTCAATCAGTTATTTGATAAATATCAATATGCTGCCCGTAATGTGGATGCAAAATCCCTGAACAGTTTACTGA AACGGGTCGATATTATTCCCGAATCTATGGTGCTTATTCAGGCGGCCAATGAATCGGGATGGGGCAGTTCGCGTTTTGCC CGTGAAGGCTTTAACTTTTTCGGCGAATGGTGTTTTAGCAATGGTTGCGGCATAGTGCCATCCTCTCGTGGTTCGGGCAA AACCCATGAAGTGAAAGTGTTTCCCTCGGTGGACGCTTCAGTGTCTTCCTATATGCGCAATTTGAATTCGAATACGGCAT ACACGCTGTTTCGCTCAATACGTGCAGATTTACGCTCTCAGGAAGCCGAATTAAGTGCCGACCAACTGATCTATGGACTA GTGAATTATTCTGAAAGGCAAGAGGCTTATATCGACGAGTTACTCGATATGTTACGTCATAATGAAAAATATTTGGTGAA GGCGGATGCATAA
Upstream 100 bases:
>100_bases GGCATGGGCGGTTTTGTCGTCAGATTTCGTGAATTTCAAGATATGACATATAATCTGGCGCTTATTTTGCCACTCGTGAC TCAATATCAAAGGTGACTTA
Downstream 100 bases:
>100_bases AAAATGGTGGTTAGTGGGGCTTTGCTTGTGTGCGACAAGTCTGCAGGCAGAAACGATTTCCCTCGAATATAAAGGCTTTT ATGACAGATTAAAGCAAGTC
Product: mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MKTGRIGSFTLALALVILAIFSLRVWLIPTIDEPESIVNQLENSVDPVTQVPDFSAINDVAEKKRAFFDFLRPIIQQQNA IIATERDFITDMLALVENDSTLSDKQLAQLNQLFDKYQYAARNVDAKSLNSLLKRVDIIPESMVLIQAANESGWGSSRFA REGFNFFGEWCFSNGCGIVPSSRGSGKTHEVKVFPSVDASVSSYMRNLNSNTAYTLFRSIRADLRSQEAELSADQLIYGL VNYSERQEAYIDELLDMLRHNEKYLVKADA
Sequences:
>Translated_270_residues MKTGRIGSFTLALALVILAIFSLRVWLIPTIDEPESIVNQLENSVDPVTQVPDFSAINDVAEKKRAFFDFLRPIIQQQNA IIATERDFITDMLALVENDSTLSDKQLAQLNQLFDKYQYAARNVDAKSLNSLLKRVDIIPESMVLIQAANESGWGSSRFA REGFNFFGEWCFSNGCGIVPSSRGSGKTHEVKVFPSVDASVSSYMRNLNSNTAYTLFRSIRADLRSQEAELSADQLIYGL VNYSERQEAYIDELLDMLRHNEKYLVKADA >Mature_270_residues MKTGRIGSFTLALALVILAIFSLRVWLIPTIDEPESIVNQLENSVDPVTQVPDFSAINDVAEKKRAFFDFLRPIIQQQNA IIATERDFITDMLALVENDSTLSDKQLAQLNQLFDKYQYAARNVDAKSLNSLLKRVDIIPESMVLIQAANESGWGSSRFA REGFNFFGEWCFSNGCGIVPSSRGSGKTHEVKVFPSVDASVSSYMRNLNSNTAYTLFRSIRADLRSQEAELSADQLIYGL VNYSERQEAYIDELLDMLRHNEKYLVKADA
Specific function: Unknown
COG id: COG2992
COG function: function code R; Uncharacterized FlgJ-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48994948, Length=219, Percent_Identity=34.703196347032, Blast_Score=132, Evalue=3e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002901 [H]
Pfam domain/function: PF01832 Glucosaminidase [H]
EC number: NA
Molecular weight: Translated: 30382; Mature: 30382
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTGRIGSFTLALALVILAIFSLRVWLIPTIDEPESIVNQLENSVDPVTQVPDFSAINDV CCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCHHCCCCHHHHHHH AEKKRAFFDFLRPIIQQQNAIIATERDFITDMLALVENDSTLSDKQLAQLNQLFDKYQYA HHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH ARNVDAKSLNSLLKRVDIIPESMVLIQAANESGWGSSRFAREGFNFFGEWCFSNGCGIVP HHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC SSRGSGKTHEVKVFPSVDASVSSYMRNLNSNTAYTLFRSIRADLRSQEAELSADQLIYGL CCCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VNYSERQEAYIDELLDMLRHNEKYLVKADA HHHHHHHHHHHHHHHHHHHCCCCEEEEECC >Mature Secondary Structure MKTGRIGSFTLALALVILAIFSLRVWLIPTIDEPESIVNQLENSVDPVTQVPDFSAINDV CCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCHHCCCCHHHHHHH AEKKRAFFDFLRPIIQQQNAIIATERDFITDMLALVENDSTLSDKQLAQLNQLFDKYQYA HHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH ARNVDAKSLNSLLKRVDIIPESMVLIQAANESGWGSSRFAREGFNFFGEWCFSNGCGIVP HHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC SSRGSGKTHEVKVFPSVDASVSSYMRNLNSNTAYTLFRSIRADLRSQEAELSADQLIYGL CCCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VNYSERQEAYIDELLDMLRHNEKYLVKADA HHHHHHHHHHHHHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503; 1544897 [H]