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The map label for this gene is 117920548

Identifier: 117920548

GI number: 117920548

Start: 2527441

End: 2528736

Strand: Reverse

Name: 117920548

Synonym: Shewana3_2104

Alternate gene names: NA

Gene position: 2528736-2527441 (Counterclockwise)

Preceding gene: 117920550

Following gene: 117920544

Centisome position: 50.86

GC content: 45.37

Gene sequence:

>1296_bases
ATGCAGCTACCTCCAGTTTTACCTCTGTTTGATTCAATTGAATTCATACAATATGGCAACAGTGTGGTGAATCAATACAT
CACTCAAGTCAGCTTATCTGATGTGCCCGATGCGGGTTTAGTGATGGAACACGCAACTGATTGGTTGTTCGAGCAAAAAC
ACAGTGAAAACAACTATAAAGCCTATCGAAGTGAACTGACCACGTTCCTGCATTGGTGCTTTGATGTCGCGAAAATGTCA
CCCACACAGGTGCTACGTAAGGATATGAGTCGTTATGTGGATTACTGCTTGGCGCCGCCGCTGGAACTGATCGGTTATTT
TAATGTGCCACAATTTAAATTGGACAAATTGCGCGATGAACGGGTACCAAACAGTCTTTGGCGGCCATTTGTGGGCAAGA
AACAGTTAGGTCAAATTCAACCCTATGTGTTGAGCGATAATGCGTTAAAAACCAAGATTGCCATTTTATCCTCGTTTTAC
AGTTACTTAATAAGTGAGGAGTTTTGCGAGCGTAATTCCGCGCAAATTTGGTTGAATCACAGCCGTTTTGCGCAGAATAA
GCAGTATCAAAGGCAAACAGAGGAAGAAGAAAATAGCTTGGCTTTCACAGAGTTACAGTGGTCCTATGTTATGAGTACCG
TCACTCAATTGGCTACTGAGTCCCCAGAGTTGCATCAACGTAGTTTATTCTTGATTTCATTGATTTATTCCTGTTATCTG
CGCATTTCGGATGTTTCGGCGCGGGTTGGCTATTCACCGGTTATGGGGCAATTTAGGCAAAATCCACAGACAGGTATTTG
GAGTTTTCACATTCCACTCAGTAAAGGCGGCAAAAAACGCAGCGTGGCGATTTCTAAGGCATTACTCGATGGTTTAGTCA
AATATCGGCAATTTTTAGGGCTGCCTGATTTTCCAAACCAAGGCGAACATCATCCTTTGTTCGTACGTCATCGCGCCGCC
GGTCGTGGCCGCGACGCGGGTCTTGTGAATGCCAATCTTGGGATCAGGCAAATCCGCGAAGATATTCAGACCATTATCAA
TCTCGCGGCAGATAACGCGCAAGCCGATGGCTTTAATCACGATGCCGAGCAAATGCGAAAACTCACCGCGCATAATATCC
GGCACACAGGGATCACTCATGACATCAATATCAATCGTCGGCCGTTGTCACACGTGCAAGCCGATGCTGGCCATGAGAGT
ATCGACACCACATCGAAATATTTGCACACCACACAAATCGAACGACACGAAAGCGCCTTCAATAAGCCATTAGACCATCT
ACAAGGCATTGACTAG

Upstream 100 bases:

>100_bases
TGTTCGCAAATTGAGTTTTTGGTTAATGCCGATAAATAACGTTATCGGCATTTGCGTTTAAGTATTATCATGCAATAAAT
AGTTAAATTTTAAAGTTAAT

Downstream 100 bases:

>100_bases
TGCTGTGTTGGCATCCCAAATCCCTCTCACACAAAGTTGCGCACAATGTATATTATGTTAAATTGAATGTGAGTAAATAT
GGAAAGCACTATTCCCTATG

Product: phage integrase family protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Site-Specific Recombinase Phage Integrase Family; Phage Integrase Family Site Specific Recombinase; Site Specific Recombinase Phage Integrase Family; Integrase / Recombinase Protein; Integrase/Recombinase Protein; Integrase/Recombinase; Site-Specific Recombinase Phage Integrase Family Protein; Site-Specific Recombinase; Site-Specific Tyrosine Integrase/Recombinase; Site-Specific Recombinase XerC; Phage Integrase Family; Phage IntegrasePhage Integrase N-Terminal SAM-Like

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MQLPPVLPLFDSIEFIQYGNSVVNQYITQVSLSDVPDAGLVMEHATDWLFEQKHSENNYKAYRSELTTFLHWCFDVAKMS
PTQVLRKDMSRYVDYCLAPPLELIGYFNVPQFKLDKLRDERVPNSLWRPFVGKKQLGQIQPYVLSDNALKTKIAILSSFY
SYLISEEFCERNSAQIWLNHSRFAQNKQYQRQTEEEENSLAFTELQWSYVMSTVTQLATESPELHQRSLFLISLIYSCYL
RISDVSARVGYSPVMGQFRQNPQTGIWSFHIPLSKGGKKRSVAISKALLDGLVKYRQFLGLPDFPNQGEHHPLFVRHRAA
GRGRDAGLVNANLGIRQIREDIQTIINLAADNAQADGFNHDAEQMRKLTAHNIRHTGITHDININRRPLSHVQADAGHES
IDTTSKYLHTTQIERHESAFNKPLDHLQGID

Sequences:

>Translated_431_residues
MQLPPVLPLFDSIEFIQYGNSVVNQYITQVSLSDVPDAGLVMEHATDWLFEQKHSENNYKAYRSELTTFLHWCFDVAKMS
PTQVLRKDMSRYVDYCLAPPLELIGYFNVPQFKLDKLRDERVPNSLWRPFVGKKQLGQIQPYVLSDNALKTKIAILSSFY
SYLISEEFCERNSAQIWLNHSRFAQNKQYQRQTEEEENSLAFTELQWSYVMSTVTQLATESPELHQRSLFLISLIYSCYL
RISDVSARVGYSPVMGQFRQNPQTGIWSFHIPLSKGGKKRSVAISKALLDGLVKYRQFLGLPDFPNQGEHHPLFVRHRAA
GRGRDAGLVNANLGIRQIREDIQTIINLAADNAQADGFNHDAEQMRKLTAHNIRHTGITHDININRRPLSHVQADAGHES
IDTTSKYLHTTQIERHESAFNKPLDHLQGID
>Mature_431_residues
MQLPPVLPLFDSIEFIQYGNSVVNQYITQVSLSDVPDAGLVMEHATDWLFEQKHSENNYKAYRSELTTFLHWCFDVAKMS
PTQVLRKDMSRYVDYCLAPPLELIGYFNVPQFKLDKLRDERVPNSLWRPFVGKKQLGQIQPYVLSDNALKTKIAILSSFY
SYLISEEFCERNSAQIWLNHSRFAQNKQYQRQTEEEENSLAFTELQWSYVMSTVTQLATESPELHQRSLFLISLIYSCYL
RISDVSARVGYSPVMGQFRQNPQTGIWSFHIPLSKGGKKRSVAISKALLDGLVKYRQFLGLPDFPNQGEHHPLFVRHRAA
GRGRDAGLVNANLGIRQIREDIQTIINLAADNAQADGFNHDAEQMRKLTAHNIRHTGITHDININRRPLSHVQADAGHES
IDTTSKYLHTTQIERHESAFNKPLDHLQGID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49477; Mature: 49477

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLPPVLPLFDSIEFIQYGNSVVNQYITQVSLSDVPDAGLVMEHATDWLFEQKHSENNYK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHH
AYRSELTTFLHWCFDVAKMSPTQVLRKDMSRYVDYCLAPPLELIGYFNVPQFKLDKLRDE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHH
RVPNSLWRPFVGKKQLGQIQPYVLSDNALKTKIAILSSFYSYLISEEFCERNSAQIWLNH
CCCHHHHCCCCCCHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEH
SRFAQNKQYQRQTEEEENSLAFTELQWSYVMSTVTQLATESPELHQRSLFLISLIYSCYL
HHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
RISDVSARVGYSPVMGQFRQNPQTGIWSFHIPLSKGGKKRSVAISKALLDGLVKYRQFLG
HHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC
LPDFPNQGEHHPLFVRHRAAGRGRDAGLVNANLGIRQIREDIQTIINLAADNAQADGFNH
CCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
DAEQMRKLTAHNIRHTGITHDININRRPLSHVQADAGHESIDTTSKYLHTTQIERHESAF
CHHHHHHHHHHCCHHCCCEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
NKPLDHLQGID
CCCHHHHCCCC
>Mature Secondary Structure
MQLPPVLPLFDSIEFIQYGNSVVNQYITQVSLSDVPDAGLVMEHATDWLFEQKHSENNYK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHH
AYRSELTTFLHWCFDVAKMSPTQVLRKDMSRYVDYCLAPPLELIGYFNVPQFKLDKLRDE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHH
RVPNSLWRPFVGKKQLGQIQPYVLSDNALKTKIAILSSFYSYLISEEFCERNSAQIWLNH
CCCHHHHCCCCCCHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEH
SRFAQNKQYQRQTEEEENSLAFTELQWSYVMSTVTQLATESPELHQRSLFLISLIYSCYL
HHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
RISDVSARVGYSPVMGQFRQNPQTGIWSFHIPLSKGGKKRSVAISKALLDGLVKYRQFLG
HHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC
LPDFPNQGEHHPLFVRHRAAGRGRDAGLVNANLGIRQIREDIQTIINLAADNAQADGFNH
CCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
DAEQMRKLTAHNIRHTGITHDININRRPLSHVQADAGHESIDTTSKYLHTTQIERHESAF
CHHHHHHHHHHCCHHCCCEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
NKPLDHLQGID
CCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA