| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is insN [H]
Identifier: 117920544
GI number: 117920544
Start: 2524374
End: 2524574
Strand: Reverse
Name: insN [H]
Synonym: Shewana3_2100
Alternate gene names: 117920544
Gene position: 2524574-2524374 (Counterclockwise)
Preceding gene: 117920548
Following gene: 117920538
Centisome position: 50.77
GC content: 42.79
Gene sequence:
>201_bases ATGACAAAGAAAAAAGGCCCGAATTTTAGCCCTGAATTCAGACTGGAAACAGCACAACTGGTTGTTGACCAAGGTTATAC GAATAGAGAAGCAGCCGAAGCCATGGGAGTTGGTTATTCAACTCTGGGCAAATGGGTTAAGCAATTACGGGAAGAACGTG CAGGTAAAGTCCCTATTAAGGCCAGAATCTTTCAAATATAG
Upstream 100 bases:
>100_bases CCACGCTCTCACGTTCTAATATATGAGTGTAGTGGCATAGTGAATTTGGCCACCTAATTAGAGCTGCTATGATGGCAGCA TAACAACGTTAGGTGACAAA
Downstream 100 bases:
>100_bases TTTTCGGATGTTATTCGTTTCATCGTAATAAAATGTATAAACATCATCGGTATTTTGAAGACCGTGATTCTGGATAAGAA TATATCTACTTTCATTGACA
Product: transposase IS3/IS911
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 66; Mature: 65
Protein sequence:
>66_residues MTKKKGPNFSPEFRLETAQLVVDQGYTNREAAEAMGVGYSTLGKWVKQLREERAGKVPIKARIFQI
Sequences:
>Translated_66_residues MTKKKGPNFSPEFRLETAQLVVDQGYTNREAAEAMGVGYSTLGKWVKQLREERAGKVPIKARIFQI >Mature_65_residues TKKKGPNFSPEFRLETAQLVVDQGYTNREAAEAMGVGYSTLGKWVKQLREERAGKVPIKARIFQI
Specific function: Involved in the transposition of the insertion sequence IS911 [H]
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 7470; Mature: 7339
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKKGPNFSPEFRLETAQLVVDQGYTNREAAEAMGVGYSTLGKWVKQLREERAGKVPIK CCCCCCCCCCCCEEHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC ARIFQI EEEECC >Mature Secondary Structure TKKKGPNFSPEFRLETAQLVVDQGYTNREAAEAMGVGYSTLGKWVKQLREERAGKVPIK CCCCCCCCCCCEEHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC ARIFQI EEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2163395 [H]