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The map label for this gene is araA [H]

Identifier: 117920510

GI number: 117920510

Start: 2473107

End: 2474609

Strand: Direct

Name: araA [H]

Synonym: Shewana3_2066

Alternate gene names: 117920510

Gene position: 2473107-2474609 (Clockwise)

Preceding gene: 117920509

Following gene: 117920511

Centisome position: 49.74

GC content: 49.57

Gene sequence:

>1503_bases
ATGAAAGCCTTCAAACAAAAACAAGTGTGGTTTATCACGGGTTCGCAGGATTTATACGGCCCAAAAGTATTAGAGCAAGT
CGCTAAAAACAGTGAGCAAATTGTTCATGGCTTTAATGAATCATCCGCCATTTCCATCGAAGTGGTGTATAAGCCAACCG
TAAAATCCCCACGGGAAATTCACGCCGTATGCCAAGCGGCCAACAGCGATGAAAACTGTGTTGGCGTTATTCTGTGGATG
CACACTTTCTCTCCAGCCAAGATGTGGATTGCTGGCCTTAATGAATTAAGCAAGCCATTCATGCACTTACACACGCAGTT
CAATGCTGAGCTCCCTTGGAGCGAAATCAACATGAACTACATGAACACCCACCAAAGTGCTCACGGTTGCCGCGAATTTG
GTTTTATCGGCACTCGTATGCGTAAAGAGCGCAAAGTGGTTGTGGGTCACTGGCAATCGAGCGATGTACAGGCTCAAATC
GATGATTGGTGCCGCGCAGCGGCAGGTTGGCACGAGAGCCAAAACCTGCGTATCGCCCGCTTTGGCGACAACATGCGTCA
AGTGGCCGTAACCGAAGGTGACAAAGTTGCCGCACAAATTCAATTCGGTTATGAAGTGCACGCCTACAGCTTAGGTGAAC
TCAATGAGGCGATTGCAGACATTGCCGAAGGCGATGTAACCGCACAACTCGACCGTTACGCCAGCGAATACCAAGTAGGT
AACGAGCTATTTGGCGATGAATACCAATTAGACCGTTTAAGAAAAGAAGCCAAGATTGAACTCGGCTTAACCCAATTCTT
AACCCAAGGTGGATTTGGTGCCTTTACCAACTGCTTCGAAAACCTCACTGGCATGACAGGATTACCCGGACTGGCTACTC
AACGTCTGATGGCGAACGGTTTCGGTTACGGCGGCGAAGGTGACTGGAAAACGGCTGCCATGGTGCGCATCATGAAAGTG
ATGGGCCAAGGCCGTGCCGGTGGTACTTCATTTATGGAAGACTACACCTATAACTTTGGCGCGACTGACCAAGTTCTTGG
CGCCCACATGCTAGAAGTGTGCCCATCGATTGCTGCTGCAAAACCGCGTTTAGAAGTTCACCGCCACACCATTGGTGTGC
GTTGTGACGTGCCACGTCTGTTATTCACTGGTAAAGCGGGCCCAGCAATCAACGTATCGACTATCGATTTAGGCAACCGT
TTCCGTATCATTCTTAATGAATTAGATACAGTGACACCACCACAGGATCTGCCAAATCTGCCTGTCGCGTCTGCGCTGTG
GGAGCCTCGTCCGAATTTAGCGGTTGCCGCCGCAGCTTGGATCCACGCCGGTGGTGCTCACCACTCAGCTTACAGCCAAG
CTATCACGACGGATCAGATTGTCGACTTTGCTGAAATGGCCGGTGCTGAACTGGTTATCATCGATGCCGACACTAAGATC
CGCGAGTTTAAGAATGAGCTTCGCCAAAATTCCGTTTATTACGGTTTAGCAAGAGGTTTATAA

Upstream 100 bases:

>100_bases
TTATTGATAAGCACTATTTGCGTAAGCATGGAAAAGACGCTTATTACGGCCAAAGCAAGTAATTGCCAGTCGGGTCTCAT
TTCAAACTAGAGAGAGTAAT

Downstream 100 bases:

>100_bases
TTCTCGCGCAGCAATAAAGCCGCCTTCGGGCGGCTTTCATTTTTCTGGCACCATTCATTTCATAGGGTTAACACAGATGT
ATACAGAATTTGACGGCATT

Product: L-arabinose isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MKAFKQKQVWFITGSQDLYGPKVLEQVAKNSEQIVHGFNESSAISIEVVYKPTVKSPREIHAVCQAANSDENCVGVILWM
HTFSPAKMWIAGLNELSKPFMHLHTQFNAELPWSEINMNYMNTHQSAHGCREFGFIGTRMRKERKVVVGHWQSSDVQAQI
DDWCRAAAGWHESQNLRIARFGDNMRQVAVTEGDKVAAQIQFGYEVHAYSLGELNEAIADIAEGDVTAQLDRYASEYQVG
NELFGDEYQLDRLRKEAKIELGLTQFLTQGGFGAFTNCFENLTGMTGLPGLATQRLMANGFGYGGEGDWKTAAMVRIMKV
MGQGRAGGTSFMEDYTYNFGATDQVLGAHMLEVCPSIAAAKPRLEVHRHTIGVRCDVPRLLFTGKAGPAINVSTIDLGNR
FRIILNELDTVTPPQDLPNLPVASALWEPRPNLAVAAAAWIHAGGAHHSAYSQAITTDQIVDFAEMAGAELVIIDADTKI
REFKNELRQNSVYYGLARGL

Sequences:

>Translated_500_residues
MKAFKQKQVWFITGSQDLYGPKVLEQVAKNSEQIVHGFNESSAISIEVVYKPTVKSPREIHAVCQAANSDENCVGVILWM
HTFSPAKMWIAGLNELSKPFMHLHTQFNAELPWSEINMNYMNTHQSAHGCREFGFIGTRMRKERKVVVGHWQSSDVQAQI
DDWCRAAAGWHESQNLRIARFGDNMRQVAVTEGDKVAAQIQFGYEVHAYSLGELNEAIADIAEGDVTAQLDRYASEYQVG
NELFGDEYQLDRLRKEAKIELGLTQFLTQGGFGAFTNCFENLTGMTGLPGLATQRLMANGFGYGGEGDWKTAAMVRIMKV
MGQGRAGGTSFMEDYTYNFGATDQVLGAHMLEVCPSIAAAKPRLEVHRHTIGVRCDVPRLLFTGKAGPAINVSTIDLGNR
FRIILNELDTVTPPQDLPNLPVASALWEPRPNLAVAAAAWIHAGGAHHSAYSQAITTDQIVDFAEMAGAELVIIDADTKI
REFKNELRQNSVYYGLARGL
>Mature_500_residues
MKAFKQKQVWFITGSQDLYGPKVLEQVAKNSEQIVHGFNESSAISIEVVYKPTVKSPREIHAVCQAANSDENCVGVILWM
HTFSPAKMWIAGLNELSKPFMHLHTQFNAELPWSEINMNYMNTHQSAHGCREFGFIGTRMRKERKVVVGHWQSSDVQAQI
DDWCRAAAGWHESQNLRIARFGDNMRQVAVTEGDKVAAQIQFGYEVHAYSLGELNEAIADIAEGDVTAQLDRYASEYQVG
NELFGDEYQLDRLRKEAKIELGLTQFLTQGGFGAFTNCFENLTGMTGLPGLATQRLMANGFGYGGEGDWKTAAMVRIMKV
MGQGRAGGTSFMEDYTYNFGATDQVLGAHMLEVCPSIAAAKPRLEVHRHTIGVRCDVPRLLFTGKAGPAINVSTIDLGNR
FRIILNELDTVTPPQDLPNLPVASALWEPRPNLAVAAAAWIHAGGAHHSAYSQAITTDQIVDFAEMAGAELVIIDADTKI
REFKNELRQNSVYYGLARGL

Specific function: Catalyzes the conversion of L-arabinose to L-ribulose [H]

COG id: COG2160

COG function: function code G; L-arabinose isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arabinose isomerase family [H]

Homologues:

Organism=Escherichia coli, GI1786248, Length=502, Percent_Identity=51.792828685259, Blast_Score=552, Evalue=1e-158,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004216
- InterPro:   IPR009015
- InterPro:   IPR003762
- ProDom:   PD018364 [H]

Pfam domain/function: PF02610 Arabinose_Isome [H]

EC number: =5.3.1.4 [H]

Molecular weight: Translated: 55349; Mature: 55349

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFKQKQVWFITGSQDLYGPKVLEQVAKNSEQIVHGFNESSAISIEVVYKPTVKSPREI
CCCCCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHCCCCCCCEEEEEEEECCCCCCHHHH
HAVCQAANSDENCVGVILWMHTFSPAKMWIAGLNELSKPFMHLHTQFNAELPWSEINMNY
HHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCH
MNTHQSAHGCREFGFIGTRMRKERKVVVGHWQSSDVQAQIDDWCRAAAGWHESQNLRIAR
HHCCCHHHHHHHHCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEE
FGDNMRQVAVTEGDKVAAQIQFGYEVHAYSLGELNEAIADIAEGDVTAQLDRYASEYQVG
ECCCCEEEEEECCCEEEEEEEECEEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
NELFGDEYQLDRLRKEAKIELGLTQFLTQGGFGAFTNCFENLTGMTGLPGLATQRLMANG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHC
FGYGGEGDWKTAAMVRIMKVMGQGRAGGTSFMEDYTYNFGATDQVLGAHMLEVCPSIAAA
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
KPRLEVHRHTIGVRCDVPRLLFTGKAGPAINVSTIDLGNRFRIILNELDTVTPPQDLPNL
CCCCEEHHHEEEEEECCCCEEEECCCCCEEEEEEEECCCCEEHHHHHHCCCCCCCCCCCC
PVASALWEPRPNLAVAAAAWIHAGGAHHSAYSQAITTDQIVDFAEMAGAELVIIDADTKI
CCHHHHCCCCCCEEEHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHCCCEEEEEECCHHH
REFKNELRQNSVYYGLARGL
HHHHHHHHHCCEEEEHHCCC
>Mature Secondary Structure
MKAFKQKQVWFITGSQDLYGPKVLEQVAKNSEQIVHGFNESSAISIEVVYKPTVKSPREI
CCCCCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHCCCCCCCEEEEEEEECCCCCCHHHH
HAVCQAANSDENCVGVILWMHTFSPAKMWIAGLNELSKPFMHLHTQFNAELPWSEINMNY
HHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCH
MNTHQSAHGCREFGFIGTRMRKERKVVVGHWQSSDVQAQIDDWCRAAAGWHESQNLRIAR
HHCCCHHHHHHHHCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEE
FGDNMRQVAVTEGDKVAAQIQFGYEVHAYSLGELNEAIADIAEGDVTAQLDRYASEYQVG
ECCCCEEEEEECCCEEEEEEEECEEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
NELFGDEYQLDRLRKEAKIELGLTQFLTQGGFGAFTNCFENLTGMTGLPGLATQRLMANG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHC
FGYGGEGDWKTAAMVRIMKVMGQGRAGGTSFMEDYTYNFGATDQVLGAHMLEVCPSIAAA
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
KPRLEVHRHTIGVRCDVPRLLFTGKAGPAINVSTIDLGNRFRIILNELDTVTPPQDLPNL
CCCCEEHHHEEEEEECCCCEEEECCCCCEEEEEEEECCCCEEHHHHHHCCCCCCCCCCCC
PVASALWEPRPNLAVAAAAWIHAGGAHHSAYSQAITTDQIVDFAEMAGAELVIIDADTKI
CCHHHHCCCCCCEEEHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHCCCEEEEEECCHHH
REFKNELRQNSVYYGLARGL
HHHHHHHHHCCEEEEHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA