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The map label for this gene is 117920454

Identifier: 117920454

GI number: 117920454

Start: 2395973

End: 2397385

Strand: Reverse

Name: 117920454

Synonym: Shewana3_2009

Alternate gene names: NA

Gene position: 2397385-2395973 (Counterclockwise)

Preceding gene: 117920455

Following gene: 117920453

Centisome position: 48.22

GC content: 51.17

Gene sequence:

>1413_bases
ATGAAAGCATCTCAGGAAGGCTACCCTCTACTGTGGTTAAAGCGCGCGCTGGTCAATGGCAGCAGCTTGCCCGCCCCCGC
GCGCCGTAAGTTGTATCTAAAGACCGTGCTATCGGCATTAGCGGTAATTTGGCTGATAACCGGCCTTGTTATTGTTATCA
CCCCAACCCGCTATACCTGCAAATGGGTGCTGATTTTACCCGGCGCCGGCGCGGGGGCGGTCGTTAGTCTCGACAGTTTG
GGCCAAGCCAGCAGTTCGAGCAGTTCCCCTTACCTGAGTTCAGCCATCGACCCGCGGGAAAACTATAAGGCCATCGCGCT
AAGCGACAAGCTCTTAAGTGACGCAGCCGCCCAGTTAAATCTTAAGGCCTCAGCACTGGGCACGCCTAAATTAAAGCTCC
CCAGTCAAACGGGATTAATGGAGTTTAGTATCAGTGCCAACAGCGCCGAGCTTGCCGAGCAAAAAGCCTGGGCACATTAT
CGCACGCTACAGGGCACACTCTCACACCTGAGAATCGATGAAATCCATATTCGCGAAAACGGCGTCAGAATGGGGCTTGA
GAGCTTTGCCGATAAAGTGCATCAGAGTCAGGCGAATATTGTCGCCTTTCAATCTAAGACGGGGTTGGTCTCGCTGGATC
AATTTAAGGAAGTGGCGGTCACCATTGAGCATTTACGCCAAAGCCAAGTCAATCTGACCGCTAAACTCAATGGCGGCCTT
GCCAGTCAGCAACTGTTGGAAGCTGACTTATCCCTAACGGCGAGTCAGTCCACTGATTTGCTTAAGCTGAAAAACGATCA
GCTATTCCAACAACTCTTAGTTAACTATACCGAGTCTACCGCGCTGCTTGTGGGCCTTAATGGTCACTTTGGTGAGCAAC
ATCCCCAAGTGCTGACCGCCAAGACAGAGCAAAAAACCATGTTGGATGCGCTGCATAGTCGCTGCCAAAAATTGCTCACG
CGCTGCGATCCAAAGTTGATGTTGATCCTGTCCGTCGACGATATCGATGGCCGCGCAGAGCTGATGCAAAAGCTGATAAA
CATCACTACCGAAAATGAAGGCTTAACCCATGAGCTGGCGTCCCTGAGCACCCAAATTGATGAATGGGAAATCCGGCTCA
AGCACAGCAATGACGATGCGGCAAAGCTTGAGGATTTACACCGTGATCATCAACTTGCGACCGCGGTGTTTACCTCCGCC
ATTGCAAAAATTGATGTGGGCAAAGCCGACATCTTTTCCGCTTACCCGTTATTACAGCTGTTTGCAGCACCGACTCGCCC
CGAAAAGCCTGACAAGCTGGGCTTAATTTTAACCTTAGTGGGTGGCATCGCCGCCTCAATGATGGTCATTGTCGGATTGA
GCATACTATGGATACGCAAACCTATACTCCAGAAAATTCTGACGAACGACTAG

Upstream 100 bases:

>100_bases
ATTGGTGCCTGCAAGTTTACTCGGTTTGCTGTAGCTCGGAACAAGCGCTTGGGTGGCAGGTGATGCCACCCTTAGGATGA
TTCGCGAGGGAGAATTGATC

Downstream 100 bases:

>100_bases
TCTGGCTCGCCATTACGGGCACCTACTTCTTTTGGTTTTTAGGTGCCATGTATTTAGTTGCTCCAGTGATCGGTTGGATC
TTAGTGCTGCGGATGCTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MKASQEGYPLLWLKRALVNGSSLPAPARRKLYLKTVLSALAVIWLITGLVIVITPTRYTCKWVLILPGAGAGAVVSLDSL
GQASSSSSSPYLSSAIDPRENYKAIALSDKLLSDAAAQLNLKASALGTPKLKLPSQTGLMEFSISANSAELAEQKAWAHY
RTLQGTLSHLRIDEIHIRENGVRMGLESFADKVHQSQANIVAFQSKTGLVSLDQFKEVAVTIEHLRQSQVNLTAKLNGGL
ASQQLLEADLSLTASQSTDLLKLKNDQLFQQLLVNYTESTALLVGLNGHFGEQHPQVLTAKTEQKTMLDALHSRCQKLLT
RCDPKLMLILSVDDIDGRAELMQKLINITTENEGLTHELASLSTQIDEWEIRLKHSNDDAAKLEDLHRDHQLATAVFTSA
IAKIDVGKADIFSAYPLLQLFAAPTRPEKPDKLGLILTLVGGIAASMMVIVGLSILWIRKPILQKILTND

Sequences:

>Translated_470_residues
MKASQEGYPLLWLKRALVNGSSLPAPARRKLYLKTVLSALAVIWLITGLVIVITPTRYTCKWVLILPGAGAGAVVSLDSL
GQASSSSSSPYLSSAIDPRENYKAIALSDKLLSDAAAQLNLKASALGTPKLKLPSQTGLMEFSISANSAELAEQKAWAHY
RTLQGTLSHLRIDEIHIRENGVRMGLESFADKVHQSQANIVAFQSKTGLVSLDQFKEVAVTIEHLRQSQVNLTAKLNGGL
ASQQLLEADLSLTASQSTDLLKLKNDQLFQQLLVNYTESTALLVGLNGHFGEQHPQVLTAKTEQKTMLDALHSRCQKLLT
RCDPKLMLILSVDDIDGRAELMQKLINITTENEGLTHELASLSTQIDEWEIRLKHSNDDAAKLEDLHRDHQLATAVFTSA
IAKIDVGKADIFSAYPLLQLFAAPTRPEKPDKLGLILTLVGGIAASMMVIVGLSILWIRKPILQKILTND
>Mature_470_residues
MKASQEGYPLLWLKRALVNGSSLPAPARRKLYLKTVLSALAVIWLITGLVIVITPTRYTCKWVLILPGAGAGAVVSLDSL
GQASSSSSSPYLSSAIDPRENYKAIALSDKLLSDAAAQLNLKASALGTPKLKLPSQTGLMEFSISANSAELAEQKAWAHY
RTLQGTLSHLRIDEIHIRENGVRMGLESFADKVHQSQANIVAFQSKTGLVSLDQFKEVAVTIEHLRQSQVNLTAKLNGGL
ASQQLLEADLSLTASQSTDLLKLKNDQLFQQLLVNYTESTALLVGLNGHFGEQHPQVLTAKTEQKTMLDALHSRCQKLLT
RCDPKLMLILSVDDIDGRAELMQKLINITTENEGLTHELASLSTQIDEWEIRLKHSNDDAAKLEDLHRDHQLATAVFTSA
IAKIDVGKADIFSAYPLLQLFAAPTRPEKPDKLGLILTLVGGIAASMMVIVGLSILWIRKPILQKILTND

Specific function: Unknown

COG id: COG3206

COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51313; Mature: 51313

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASQEGYPLLWLKRALVNGSSLPAPARRKLYLKTVLSALAVIWLITGLVIVITPTRYTC
CCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEE
KWVLILPGAGAGAVVSLDSLGQASSSSSSPYLSSAIDPRENYKAIALSDKLLSDAAAQLN
EEEEEECCCCCCCEEEEHHCCCCCCCCCCCCHHHCCCCCCCCEEEEEHHHHHHHHHHHCE
LKASALGTPKLKLPSQTGLMEFSISANSAELAEQKAWAHYRTLQGTLSHLRIDEIHIREN
EEHHCCCCCCEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECC
GVRMGLESFADKVHQSQANIVAFQSKTGLVSLDQFKEVAVTIEHLRQSQVNLTAKLNGGL
CHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHCEEEEEECCCC
ASQQLLEADLSLTASQSTDLLKLKNDQLFQQLLVNYTESTALLVGLNGHFGEQHPQVLTA
HHHHHHHHHHHEECCCCCCEEEECCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEE
KTEQKTMLDALHSRCQKLLTRCDPKLMLILSVDDIDGRAELMQKLINITTENEGLTHELA
CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHH
SLSTQIDEWEIRLKHSNDDAAKLEDLHRDHQLATAVFTSAIAKIDVGKADIFSAYPLLQL
HHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
FAAPTRPEKPDKLGLILTLVGGIAASMMVIVGLSILWIRKPILQKILTND
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKASQEGYPLLWLKRALVNGSSLPAPARRKLYLKTVLSALAVIWLITGLVIVITPTRYTC
CCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEE
KWVLILPGAGAGAVVSLDSLGQASSSSSSPYLSSAIDPRENYKAIALSDKLLSDAAAQLN
EEEEEECCCCCCCEEEEHHCCCCCCCCCCCCHHHCCCCCCCCEEEEEHHHHHHHHHHHCE
LKASALGTPKLKLPSQTGLMEFSISANSAELAEQKAWAHYRTLQGTLSHLRIDEIHIREN
EEHHCCCCCCEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECC
GVRMGLESFADKVHQSQANIVAFQSKTGLVSLDQFKEVAVTIEHLRQSQVNLTAKLNGGL
CHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHCEEEEEECCCC
ASQQLLEADLSLTASQSTDLLKLKNDQLFQQLLVNYTESTALLVGLNGHFGEQHPQVLTA
HHHHHHHHHHHEECCCCCCEEEECCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEE
KTEQKTMLDALHSRCQKLLTRCDPKLMLILSVDDIDGRAELMQKLINITTENEGLTHELA
CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHH
SLSTQIDEWEIRLKHSNDDAAKLEDLHRDHQLATAVFTSAIAKIDVGKADIFSAYPLLQL
HHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
FAAPTRPEKPDKLGLILTLVGGIAASMMVIVGLSILWIRKPILQKILTND
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA