| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920432
Identifier: 117920432
GI number: 117920432
Start: 2365947
End: 2366279
Strand: Direct
Name: 117920432
Synonym: Shewana3_1987
Alternate gene names: NA
Gene position: 2365947-2366279 (Clockwise)
Preceding gene: 117920429
Following gene: 117920433
Centisome position: 47.58
GC content: 45.05
Gene sequence:
>333_bases ATGCCTCATATTAGTATGCGCGGCTTGCCACAGGCAGTTGTTGCAGAGCTTAGCCAAACATTACTGCAGTCTTTGGCGGC TATATGTAAAGGTAATGCAGAGAGTTTTACATTAGATTGGATCCCAAGCATCAGCTACCGTAATGGCAGAATTGATCAAC GCTTTGTCCAAATCGAATTGCTTTGGTTTCCGGTCGACCCTGATATCCATCTTAAAGTAGAACAAACGATCAGGCTGGCA GTGACAGAAGCCTATCCAGAATTAACCCAAATTGCTGTGATGTTTTTGTCACTGACCCCAAGCGCTTCCTATCGGGGTGG TCAGCATGTTTAA
Upstream 100 bases:
>100_bases CTATCCCACGTGCTTTTCGCCGAAAAGTCTTGCCGAGTTGCAGTGAAGTCGGTAATTTCTACCCCTTACGATTTTAGGAT CTCAGGTAACCACTAAAACC
Downstream 100 bases:
>100_bases AGGAGGATGCCTTGCTAGATAAGCTTGGTGGAATAGCCGTTCAACCCGAGGCTTTAACGTGGTTGCTTACGCCATGCCGA TTTAAGGCAGAATTGCTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MPHISMRGLPQAVVAELSQTLLQSLAAICKGNAESFTLDWIPSISYRNGRIDQRFVQIELLWFPVDPDIHLKVEQTIRLA VTEAYPELTQIAVMFLSLTPSASYRGGQHV
Sequences:
>Translated_110_residues MPHISMRGLPQAVVAELSQTLLQSLAAICKGNAESFTLDWIPSISYRNGRIDQRFVQIELLWFPVDPDIHLKVEQTIRLA VTEAYPELTQIAVMFLSLTPSASYRGGQHV >Mature_109_residues PHISMRGLPQAVVAELSQTLLQSLAAICKGNAESFTLDWIPSISYRNGRIDQRFVQIELLWFPVDPDIHLKVEQTIRLAV TEAYPELTQIAVMFLSLTPSASYRGGQHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12336; Mature: 12205
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHISMRGLPQAVVAELSQTLLQSLAAICKGNAESFTLDWIPSISYRNGRIDQRFVQIEL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEEEE LWFPVDPDIHLKVEQTIRLAVTEAYPELTQIAVMFLSLTPSASYRGGQHV EEEECCCCEEEEEEHHEEEEHHHHCHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure PHISMRGLPQAVVAELSQTLLQSLAAICKGNAESFTLDWIPSISYRNGRIDQRFVQIEL CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEEEE LWFPVDPDIHLKVEQTIRLAVTEAYPELTQIAVMFLSLTPSASYRGGQHV EEEECCCCEEEEEEHHEEEEHHHHCHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA